chr7 : 20,787,761 20,788,275
514 bp 79 TFs 2 linked genes
This 514 bp open chromatin element is linked to SP8 and LINC01162 and is bound by 79 transcription factors.
Linked Genes
2 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
SP8 875 bp At TSS Proximity
LINC01162 47.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:20,782,761 – 20,793,275
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP RMG-I GSE104545.ARID1A.RMG-I 514 bp overlap
ARNT::HIF1A 6 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_24h DE_24h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_48h DE_48h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_60h DE_60h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_72h DE_72h-ARNTHIF1A_MA0259.2 5 bp overlap
BCOR 3 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 228 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 162 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 290 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 205 bp overlap
BRD4 2 datasets
ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 60 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 97 bp overlap
CBX8 1 dataset
ChIP A549 ENCFF656LMW 199 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 237 bp overlap
CTCF 4 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
Motif DE_60h DE_60h-CTCF_MA1930.2 33 bp overlap
Motif DE_72h DE_72h-CTCF_MA1930.2 33 bp overlap
Crx 2 datasets
Motif DE_24h DE_24h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Dmbx1 2 datasets
Motif DE_24h DE_24h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 138 bp overlap
E2F8 1 dataset
ChIP K-562 ENCSR953DVM.E2F8.K-562 75 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 204 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR502OEK.ELF1.K-562 104 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 242 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 154 bp overlap
EZH2 12 datasets
ChIP A673 ENCFF955JRZ 514 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 452 bp overlap
ChIP GM23248 ENCFF404ZHM 178 bp overlap
ChIP GM23248 ENCFF404ZHM 379 bp overlap
ChIP SK-N-MC ENCFF674XUJ 352 bp overlap
ChIP SK-N-SH ENCFF657FZK 293 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 227 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 189 bp overlap
ChIP hepatocyte ENCFF118DKH 111 bp overlap
ChIP hepatocyte ENCFF552DZB 54 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 149 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 207 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 514 bp overlap
ChIP DE DE-FOXA2-2 514 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 98 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 447 bp overlap
ChIP DE DE-GATA4-2 396 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 402 bp overlap
ChIP DE DE-GATA6-2 461 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 407 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 400 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 410 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 415 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 279 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 274 bp overlap
GSC 2 datasets
Motif DE_24h DE_24h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_24h DE_24h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF939VKA 236 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 191 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 178 bp overlap
HIF1A 8 datasets
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 233 bp overlap
Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap
Motif DE_24h DE_24h-HIF1A_MA1106.2 6 bp overlap
Motif DE_36h DE_36h-HIF1A_MA1106.2 6 bp overlap
Motif DE_48h DE_48h-HIF1A_MA1106.2 6 bp overlap
Motif DE_60h DE_60h-HIF1A_MA1106.2 6 bp overlap
Motif DE_72h DE_72h-HIF1A_MA1106.2 6 bp overlap
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 155 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 253 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 86 bp overlap
JARID2 3 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 221 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 248 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 93 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 272 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 226 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 288 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 138 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 224 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 514 bp overlap
KLF9 4 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif DE_24h DE_24h-KLF9_MA1107.3 11 bp overlap
Motif DE_60h DE_60h-KLF9_MA1107.3 11 bp overlap
Motif DE_72h DE_72h-KLF9_MA1107.3 11 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 333 bp overlap
NRF1 4 datasets
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 157 bp overlap
ChIP Hep-G2 ENCSR853ADA.NRF1.Hep-G2 54 bp overlap
ChIP K-562 ENCSR494TDU.NRF1.K-562 207 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 261 bp overlap
OTX1 2 datasets
Motif DE_24h DE_24h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
PCGF2 1 dataset
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 514 bp overlap
PITX1 2 datasets
Motif DE_24h DE_24h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX2 2 datasets
Motif DE_24h DE_24h-PITX2_MA1547.2 8 bp overlap
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
PITX3 2 datasets
Motif DE_24h DE_24h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
POLR2A 2 datasets
ChIP neural cell ENCFF604SPB 383 bp overlap
ChIP sigmoid colon ENCFF748YVT 285 bp overlap
POU2F1::SOX2 3 datasets
Motif DE_24h DE_24h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_60h DE_60h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_72h DE_72h-POU2F1SOX2_MA1962.1 17 bp overlap
POU3F3 4 datasets
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif DE_24h DE_24h-POU3F3_MA0788.1 13 bp overlap
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
Motif DE_72h DE_72h-POU3F3_MA0788.1 13 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 514 bp overlap
RHOXF1 2 datasets
Motif DE_24h DE_24h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
RING1 1 dataset
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 180 bp overlap
RNF2 4 datasets
ChIP A549 ENCFF650XYA 271 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 266 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 131 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 243 bp overlap
RUVBL2 2 datasets
ChIP U2OS GSE130602.RUVBL2.U2OS 200 bp overlap
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 101 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 77 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 358 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 331 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 408 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 409 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 295 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 285 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 416 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 328 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 279 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 286 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 278 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 178 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 270 bp overlap
SP1 6 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
Motif DE_36h DE_36h-SP1_MA0079.5 9 bp overlap
Motif DE_48h DE_48h-SP1_MA0079.5 9 bp overlap
Motif DE_60h DE_60h-SP1_MA0079.5 9 bp overlap
Motif DE_72h DE_72h-SP1_MA0079.5 9 bp overlap
SP4 6 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap
Motif DE_48h DE_48h-SP4_MA0685.2 9 bp overlap
Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap
Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap
SP5 6 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SS18 3 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 252 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 97 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 175 bp overlap
SUZ12 2 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 68 bp overlap
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 73 bp overlap
Stat2 2 datasets
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
TBX5 3 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
Motif DE_72h DE_72h-TBX5_MA0807.1 8 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 514 bp overlap
TFAP2A 2 datasets
Motif DE_60h DE_60h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_72h DE_72h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 3 datasets
Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_72h DE_72h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 243 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 298 bp overlap
ChIP K562 ENCFF875HLX 230 bp overlap
ZFP36 1 dataset
ChIP A549 ENCFF505LUC 86 bp overlap
ZNF148 1 dataset
ChIP K-562 GSE121133.ZNF148.K-562 197 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 141 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 148 bp overlap
ZNF263 6 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
Motif DE_36h DE_36h-ZNF263_MA0528.3 7 bp overlap
Motif DE_48h DE_48h-ZNF263_MA0528.3 7 bp overlap
Motif DE_60h DE_60h-ZNF263_MA0528.3 7 bp overlap
Motif DE_72h DE_72h-ZNF263_MA0528.3 7 bp overlap
ZNF354A 4 datasets
Motif DE_24h DE_24h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_72h DE_72h-ZNF354A_MA1978.2 20 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 315 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 227 bp overlap
ZNF384 9 datasets
Motif DE_60h DE_60h-ZNF384_MA1125.2 8 bp overlap
Motif DE_72h DE_72h-ZNF384_MA1125.2 8 bp overlap
ChIP HEK293T ENCFF019DZX 218 bp overlap
ChIP HEK293T ENCFF019DZX 391 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 248 bp overlap
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 130 bp overlap
ChIP HepG2 ENCFF129PLC 266 bp overlap
ChIP K-562 ENCSR000EFP.ZNF384.K-562 218 bp overlap
ChIP K562 ENCFF365NXQ 269 bp overlap
ZNF512 2 datasets
ChIP K-562 ENCSR591CCL.ZNF512.K-562 70 bp overlap
ChIP K562 ENCFF601EMZ 112 bp overlap