chr6 : 120,871,320 120,872,395
1,075 bp 116 TFs 0 linked genes
This 1.1 kb open chromatin element has no linked target genes and is bound by 116 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:120,866,320 – 120,877,395
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
116 transcription factors
Source
Cell type
AR 2 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 194 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 233 bp overlap
ASCL1 3 datasets
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 193 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 116 bp overlap
ATF6 1 dataset
Motif ES_0h ES_0h-ATF6_MA1466.2 13 bp overlap
ATOH7 1 dataset
Motif ES_0h ES_0h-ATOH7_MA1468.1 10 bp overlap
Ascl2 1 dataset
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
Atoh1 1 dataset
Motif ES_0h ES_0h-Atoh1_MA1467.3 7 bp overlap
BHLHE22 2 datasets
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD2 3 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 91 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 200 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 375 bp overlap
BRD4 10 datasets
ChIP 402-91 GSE111253.BRD4.402-91 226 bp overlap
ChIP BE2C GSE80151.BRD4.BE2C 191 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 321 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 479 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 205 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 516 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 404 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 191 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 379 bp overlap
ChIP hESC GSE33281.BRD4.hESC 72 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 171 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 135 bp overlap
CTCF 6 datasets
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 347 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 274 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 295 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 398 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 160 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 179 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 449 bp overlap
ChIP BLaER1 ENCFF262VBH 251 bp overlap
E2F1 1 dataset
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 310 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 287 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 181 bp overlap
EP300 1 dataset
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 277 bp overlap
ERG 3 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 227 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 346 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 302 bp overlap
ESR1 9 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 315 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 279 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 209 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 338 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 630 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 253 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 252 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 317 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 149 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 253 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 669 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 248 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 228 bp overlap
GSPT2 2 datasets
ChIP HEK293T GSE35197.GSPT2.HEK293T 306 bp overlap
ChIP HEK293T GSE35197.GSPT2.HEK293T 177 bp overlap
HAND2 2 datasets
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 163 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 196 bp overlap
HIC2 1 dataset
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HNF4A 4 datasets
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap
Motif ES_0h ES_0h-HNF4A_MA0114.5 9 bp overlap
Motif ES_0h ES_0h-HNF4A_MA1494.2 14 bp overlap
HNF4G 2 datasets
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
Motif ES_0h ES_0h-HNF4G_MA0484.3 9 bp overlap
Hand1 1 dataset
Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 95 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 98 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 170 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 379 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 227 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 275 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 156 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MXI1 1 dataset
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 396 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 295 bp overlap
MYC 1 dataset
ChIP BE2C_SHCTR GSE70098.MYC.BE2C_SHCTR 247 bp overlap
MYCN 6 datasets
ChIP BE2C GSE80151.MYCN.BE2C 401 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 165 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 149 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 247 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 393 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 135 bp overlap
MYOG 1 dataset
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
NFKB1 4 datasets
ChIP HEK293T GSE129618.NFKB1.HEK293T 277 bp overlap
ChIP HEK293T GSE129618.NFKB1.HEK293T 193 bp overlap
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 204 bp overlap
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 381 bp overlap
NHLH1 1 dataset
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
NR2C1 1 dataset
Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap
Neurod2 3 datasets
Motif ES_0h ES_0h-Neurod2_MA0668.3 8 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Npas4 1 dataset
Motif ES_0h ES_0h-Npas4_MA1995.2 7 bp overlap
Nr1H2 1 dataset
Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 359 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 238 bp overlap
Olig2 2 datasets
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 183 bp overlap
POU2F3 1 dataset
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 291 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Pparg::Rxra 2 datasets
Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap
Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap
RARB 1 dataset
Motif ES_0h ES_0h-RARB_MA1552.2 13 bp overlap
RARG 1 dataset
Motif ES_0h ES_0h-RARG_MA1553.2 13 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 206 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 391 bp overlap
REST 7 datasets
ChIP GM23338 ENCSR871KYB.REST.GM23338 94 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 111 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 139 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 215 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 191 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 1075 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 592 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 200 bp overlap
RUNX2 1 dataset
Motif ES_0h ES_0h-RUNX2_MA0511.2 9 bp overlap
RXRB 1 dataset
Motif ES_0h ES_0h-RXRB_MA1555.1 14 bp overlap
RXRG 1 dataset
Motif ES_0h ES_0h-RXRG_MA1556.1 14 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 160 bp overlap
SMAD2 1 dataset
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 170 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 142 bp overlap
SRSF1 1 dataset
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 305 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 212 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
TP63 3 datasets
ChIP breast-organoid GSE113909.TP63.breast-organoid 192 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 184 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 290 bp overlap
TP73 1 dataset
Motif ES_0h ES_0h-TP73_MA0861.2 16 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 259 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 703 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 703 bp overlap
Tcf12 2 datasets
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
ZBED1 1 dataset
Motif ES_0h ES_0h-ZBED1_MA0749.2 12 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 191 bp overlap
ZBTB48 4 datasets
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 246 bp overlap
ChIP U2OS GSE96776.ZBTB48.U2OS 504 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 480 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 385 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 229 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 296 bp overlap
ZNF189 1 dataset
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF257 1 dataset
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF280B 2 datasets
ChIP HepG2 ENCFF084BYB 481 bp overlap
ChIP HepG2 ENCFF084BYB 481 bp overlap
ZNF331 1 dataset
Motif ES_0h ES_0h-ZNF331_MA1726.2 10 bp overlap
ZNF574 1 dataset
Motif ES_0h ES_0h-ZNF574_MA1982.2 14 bp overlap
ZNF667 1 dataset
Motif ES_0h ES_0h-ZNF667_MA1984.2 11 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
ZNF93 1 dataset
Motif ES_0h ES_0h-ZNF93_MA1721.2 14 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap