chr6 : 56,669,688 56,670,510
822 bp 106 TFs 0 linked genes
This 822 bp open chromatin element has no linked target genes and is bound by 106 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:56,664,688 – 56,675,510
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
106 transcription factors
Source
Cell type
AR 4 datasets
ChIP DU145_FOXA1 GSE47987.AR.DU145_FOXA1 249 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 135 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 159 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 113 bp overlap
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 281 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 102 bp overlap
Atf3 2 datasets
Motif DE_48h DE_48h-Atf3_MA1988.2 7 bp overlap
Motif DE_60h DE_60h-Atf3_MA1988.2 7 bp overlap
BACH1 2 datasets
Motif DE_48h DE_48h-BACH1_MA1633.2 9 bp overlap
Motif DE_60h DE_60h-BACH1_MA1633.2 9 bp overlap
BACH2 2 datasets
Motif DE_48h DE_48h-BACH2_MA1101.3 11 bp overlap
Motif DE_60h DE_60h-BACH2_MA1101.3 11 bp overlap
BATF 2 datasets
Motif DE_48h DE_48h-BATF_MA1634.2 7 bp overlap
Motif DE_60h DE_60h-BATF_MA1634.2 7 bp overlap
BATF3 2 datasets
Motif DE_48h DE_48h-BATF3_MA0835.3 7 bp overlap
Motif DE_60h DE_60h-BATF3_MA0835.3 7 bp overlap
BATF::JUN 2 datasets
Motif DE_48h DE_48h-BATFJUN_MA0462.3 7 bp overlap
Motif DE_60h DE_60h-BATFJUN_MA0462.3 7 bp overlap
BHLHE40 2 datasets
ChIP IMR-90 ENCFF312JYK 285 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 297 bp overlap
BHLHE41 2 datasets
Motif DE_48h DE_48h-BHLHE41_MA0636.1 10 bp overlap
Motif DE_60h DE_60h-BHLHE41_MA0636.1 10 bp overlap
BNC2 2 datasets
Motif DE_48h DE_48h-BNC2_MA1928.2 7 bp overlap
Motif DE_60h DE_60h-BNC2_MA1928.2 7 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 275 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap
CREBBP 3 datasets
ChIP PC-3 GSE147455.CREBBP.PC-3 150 bp overlap
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 164 bp overlap
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 163 bp overlap
CRY1 2 datasets
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 258 bp overlap
ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 276 bp overlap
CTCF 10 datasets
ChIP D721Med ENCFF513FYD 150 bp overlap
ChIP RWPE2 ENCFF911IEE 410 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF041CKA 231 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 203 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF595WAL 314 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 389 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 551 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 339 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 114 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 104 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 360 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 232 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 128 bp overlap
ESR1 2 datasets
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 237 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 203 bp overlap
FOS 5 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 774 bp overlap
Motif DE_48h DE_48h-FOS_MA0476.2 8 bp overlap
Motif DE_60h DE_60h-FOS_MA0476.2 8 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 145 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 137 bp overlap
FOS::JUN 2 datasets
Motif DE_48h DE_48h-FOSJUN_MA0099.4 9 bp overlap
Motif DE_60h DE_60h-FOSJUN_MA0099.4 9 bp overlap
FOS::JUNB 2 datasets
Motif DE_48h DE_48h-FOSJUNB_MA1134.2 9 bp overlap
Motif DE_60h DE_60h-FOSJUNB_MA1134.2 9 bp overlap
FOS::JUND 2 datasets
Motif DE_48h DE_48h-FOSJUND_MA1141.2 9 bp overlap
Motif DE_60h DE_60h-FOSJUND_MA1141.2 9 bp overlap
FOSB::JUNB 2 datasets
Motif DE_48h DE_48h-FOSBJUNB_MA1135.2 9 bp overlap
Motif DE_60h DE_60h-FOSBJUNB_MA1135.2 9 bp overlap
FOSL1 2 datasets
Motif DE_48h DE_48h-FOSL1_MA0477.3 9 bp overlap
Motif DE_60h DE_60h-FOSL1_MA0477.3 9 bp overlap
FOSL1::JUN 2 datasets
Motif DE_48h DE_48h-FOSL1JUN_MA1128.2 9 bp overlap
Motif DE_60h DE_60h-FOSL1JUN_MA1128.2 9 bp overlap
FOSL1::JUNB 2 datasets
Motif DE_48h DE_48h-FOSL1JUNB_MA1137.2 9 bp overlap
Motif DE_60h DE_60h-FOSL1JUNB_MA1137.2 9 bp overlap
FOSL1::JUND 2 datasets
Motif DE_48h DE_48h-FOSL1JUND_MA1142.2 8 bp overlap
Motif DE_60h DE_60h-FOSL1JUND_MA1142.2 8 bp overlap
FOSL2 2 datasets
Motif DE_48h DE_48h-FOSL2_MA0478.2 10 bp overlap
Motif DE_60h DE_60h-FOSL2_MA0478.2 10 bp overlap
FOSL2::JUN 2 datasets
Motif DE_48h DE_48h-FOSL2JUN_MA1130.2 9 bp overlap
Motif DE_60h DE_60h-FOSL2JUN_MA1130.2 9 bp overlap
FOSL2::JUNB 2 datasets
Motif DE_48h DE_48h-FOSL2JUNB_MA1138.2 9 bp overlap
Motif DE_60h DE_60h-FOSL2JUNB_MA1138.2 9 bp overlap
FOSL2::JUND 2 datasets
Motif DE_48h DE_48h-FOSL2JUND_MA1144.2 9 bp overlap
Motif DE_60h DE_60h-FOSL2JUND_MA1144.2 9 bp overlap
FOXA1 1 dataset
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 264 bp overlap
FOXA2 8 datasets
ChIP BJ1-hTERT GSE90454.FOXA2.BJ1-hTERT 247 bp overlap
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 285 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 139 bp overlap
ChIP BJ1-hTERT_Mimo GSE90454.FOXA2.BJ1-hTERT_Mimo 241 bp overlap
ChIP BJ1-hTERT_Mimo_Release GSE90454.FOXA2.BJ1-hTERT_Mimo_Release 205 bp overlap
ChIP BJ1-hTERT_MimosinePlus GSE90454.FOXA2.BJ1-hTERT_MimosinePlus 139 bp overlap
ChIP DE DE-FOXA2-1 464 bp overlap
ChIP DE DE-FOXA2-2 475 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 306 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 371 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 410 bp overlap
ChIP DE DE-GATA4-2 556 bp overlap
ChIP DE DE-GATA4-2 165 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 362 bp overlap
ChIP DE DE-GATA6-2 492 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 525 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 207 bp overlap
HDAC2 2 datasets
ChIP PC-3 GSE147455.HDAC2.PC-3 145 bp overlap
ChIP PC-3_GDC-resist GSE147455.HDAC2.PC-3_GDC-resist 125 bp overlap
HNF4A 2 datasets
ChIP liver ENCFF449HPV 146 bp overlap
ChIP liver ERP002306.HNF4A.liver 141 bp overlap
HOXB13 1 dataset
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 207 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 486 bp overlap
IRF4 1 dataset
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 85 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 129 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 178 bp overlap
JUN::JUNB 2 datasets
Motif DE_48h DE_48h-JUNJUNB_MA1132.2 8 bp overlap
Motif DE_60h DE_60h-JUNJUNB_MA1132.2 8 bp overlap
JUNB 4 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 404 bp overlap
Motif DE_48h DE_48h-JUNB_MA0490.3 9 bp overlap
Motif DE_60h DE_60h-JUNB_MA0490.3 9 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 123 bp overlap
JUND 2 datasets
Motif DE_48h DE_48h-JUND_MA0491.3 9 bp overlap
Motif DE_60h DE_60h-JUND_MA0491.3 9 bp overlap
Jun 2 datasets
Motif DE_48h DE_48h-Jun_MA0489.3 8 bp overlap
Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap
KDM1A 1 dataset
ChIP keratinocyte_diff GSE57702.KDM1A.keratinocyte_diff 170 bp overlap
MAFK 2 datasets
Motif DE_48h DE_48h-MAFK_MA0496.4 10 bp overlap
Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap
MITF 8 datasets
ChIP 501-mel GSE137522.MITF.501-mel 459 bp overlap
ChIP 501-mel GSE61965.MITF.501-mel 187 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 405 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 286 bp overlap
Motif DE_48h DE_48h-MITF_MA0620.4 10 bp overlap
Motif DE_60h DE_60h-MITF_MA0620.4 10 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 387 bp overlap
ChIP K562 ENCFF731XJJ 181 bp overlap
MXI1 2 datasets
Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap
Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 169 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 238 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 412 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 390 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 327 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 377 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 352 bp overlap
NR2F2 2 datasets
ChIP liver ENCSR168SMX.NR2F2.liver 389 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 198 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 415 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap
PBX3 2 datasets
Motif DE_48h DE_48h-PBX3_MA1114.2 11 bp overlap
Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 314 bp overlap
PKNOX1 2 datasets
Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 223 bp overlap
POLR2A 1 dataset
ChIP vagina ENCFF305NWS 465 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 300 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 249 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 243 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 217 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 187 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 441 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 586 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 414 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 409 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 241 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 222 bp overlap
SMC1 1 dataset
ChIP HMEC-1 GSE101921.SMC1.HMEC-1 95 bp overlap
SNAI2 4 datasets
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 322 bp overlap
ChIP keratinocyte_LacZ_DIFF GSE55421.SNAI2.keratinocyte_LacZ_DIFF 275 bp overlap
ChIP keratinocyte_SHCTR GSE55421.SNAI2.keratinocyte_SHCTR 174 bp overlap
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 248 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 403 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 511 bp overlap
SREBF1 2 datasets
Motif DE_48h DE_48h-SREBF1_MA0829.3 10 bp overlap
Motif DE_60h DE_60h-SREBF1_MA0829.3 10 bp overlap
SREBF2 2 datasets
Motif DE_48h DE_48h-SREBF2_MA0828.3 10 bp overlap
Motif DE_60h DE_60h-SREBF2_MA0828.3 10 bp overlap
STAG1 1 dataset
ChIP HMEC-1 GSE101921.STAG1.HMEC-1 123 bp overlap
STAG2 1 dataset
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 137 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 205 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 181 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 184 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 319 bp overlap
TFE3 3 datasets
Motif DE_48h DE_48h-TFE3_MA0831.3 10 bp overlap
Motif DE_60h DE_60h-TFE3_MA0831.3 10 bp overlap
ChIP K562 ENCFF697ABG 317 bp overlap
TFEB 2 datasets
Motif DE_48h DE_48h-TFEB_MA0692.2 8 bp overlap
Motif DE_60h DE_60h-TFEB_MA0692.2 8 bp overlap
TFEC 2 datasets
Motif DE_48h DE_48h-TFEC_MA0871.3 8 bp overlap
Motif DE_60h DE_60h-TFEC_MA0871.3 8 bp overlap
TOE1 1 dataset
ChIP MCF-7 ENCFF544WQF 301 bp overlap
USF1 14 datasets
ChIP A-549 ENCSR000BJB.USF1.A-549 129 bp overlap
Motif DE_48h DE_48h-USF1_MA0093.4 10 bp overlap
Motif DE_60h DE_60h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 164 bp overlap
ChIP HCT116 ENCFF330PYP 365 bp overlap
ChIP HepG2 ENCFF201JKA 337 bp overlap
ChIP HepG2 ENCFF807KYJ 201 bp overlap
ChIP Ishikawa ENCFF728IEG 67 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 158 bp overlap
ChIP SK-N-SH ENCFF967PDP 311 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 236 bp overlap
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 190 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 196 bp overlap
USF2 7 datasets
Motif DE_48h DE_48h-USF2_MA0526.5 10 bp overlap
Motif DE_60h DE_60h-USF2_MA0526.5 10 bp overlap
ChIP IMR-90 ENCFF438KUN 190 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 252 bp overlap
ChIP K-562 ENCSR578KEN.USF2.K-562 135 bp overlap
ChIP K562 ENCFF397QGU 265 bp overlap
ChIP WTC11 ENCFF139JAW 417 bp overlap
YY1 2 datasets
ChIP ALL GSE145549.YY1.ALL 225 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 313 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 112 bp overlap
ZEB1 1 dataset
ChIP PDAC GSE64557.ZEB1.PDAC 489 bp overlap
ZNF135 2 datasets
Motif DE_48h DE_48h-ZNF135_MA1587.1 14 bp overlap
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
ZNF213 4 datasets
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap
Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 491 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 417 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 324 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 422 bp overlap
ZNF460 2 datasets
Motif DE_48h DE_48h-ZNF460_MA1596.1 16 bp overlap
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 105 bp overlap
ZNF507 1 dataset
ChIP MCF-7 ENCFF080XWY 377 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 437 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 451 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 256 bp overlap