chr6 : 50,849,082 50,849,751
669 bp 85 TFs 0 linked genes
This 669 bp open chromatin element has no linked target genes and is bound by 85 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:50,844,082 – 50,854,751
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
AR 7 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 79 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 185 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 124 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 155 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 144 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 53 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 77 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 508 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 553 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 487 bp overlap
BRD4 10 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 233 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 133 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 191 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 135 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 229 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 141 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 229 bp overlap
ChIP VCaP GSE148358.BRD4.VCaP 76 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 458 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 243 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 164 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 110 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 417 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 138 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 282 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 108 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 260 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 383 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 478 bp overlap
CTCF 7 datasets
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 105 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 127 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 170 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 154 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 134 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 147 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 334 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 211 bp overlap
DMRTA1 1 dataset
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 261 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 304 bp overlap
ESR1 3 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 218 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 359 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 108 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 232 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 23 datasets
ChIP A673 ENCFF790MVL 257 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 611 bp overlap
ChIP GM23338 ENCFF886DXX 331 bp overlap
ChIP H1 ENCFF232NZA 669 bp overlap
ChIP T98G GSE112240.EZH2.T98G 213 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 669 bp overlap
ChIP astrocyte ENCFF365JTP 637 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 540 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 331 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 149 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 217 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 381 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 669 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 197 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 669 bp overlap
ChIP hepatocyte ENCFF118DKH 108 bp overlap
ChIP hepatocyte ENCFF118DKH 310 bp overlap
ChIP hepatocyte ENCFF118DKH 277 bp overlap
ChIP hepatocyte ENCFF552DZB 669 bp overlap
ChIP myotube ENCFF857GWB 331 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 522 bp overlap
ChIP neural progenitor cell ENCFF018MKA 669 bp overlap
ChIP neural progenitor cell ENCFF472NFV 669 bp overlap
FOXA1 10 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 66 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 129 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 80 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 112 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 59 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 58 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 262 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 468 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 209 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 357 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 300 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 103 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 199 bp overlap
HNRNPK 1 dataset
ChIP HepG2 ENCFF826MXP 81 bp overlap
HOXB13 9 datasets
ChIP 22Rv1 GSE129951.HOXB13.22Rv1 120 bp overlap
ChIP LNCaP GSE96652.HOXB13.LNCaP 121 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 57 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 77 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 100 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 91 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 126 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 114 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 61 bp overlap
JARID2 4 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 396 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 280 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 463 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 545 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 331 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 550 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 669 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 156 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 178 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 203 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 417 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 264 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 669 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 176 bp overlap
NR1H4::RXRA 3 datasets
Motif DE_12h DE_12h-NR1H4RXRA_MA1146.2 13 bp overlap
Motif DE_24h DE_24h-NR1H4RXRA_MA1146.2 13 bp overlap
Motif ES_0h ES_0h-NR1H4RXRA_MA1146.2 13 bp overlap
NR2F1 3 datasets
Motif DE_12h DE_12h-NR2F1_MA1538.1 15 bp overlap
Motif DE_24h DE_24h-NR2F1_MA1538.1 15 bp overlap
Motif ES_0h ES_0h-NR2F1_MA1538.1 15 bp overlap
NR2F6 3 datasets
Motif DE_12h DE_12h-NR2F6_MA1539.1 15 bp overlap
Motif DE_24h DE_24h-NR2F6_MA1539.1 15 bp overlap
Motif ES_0h ES_0h-NR2F6_MA1539.1 15 bp overlap
NR4A2::RXRA 3 datasets
Motif DE_12h DE_12h-NR4A2RXRA_MA1147.2 13 bp overlap
Motif DE_24h DE_24h-NR4A2RXRA_MA1147.2 13 bp overlap
Motif ES_0h ES_0h-NR4A2RXRA_MA1147.2 13 bp overlap
OSR1 3 datasets
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
Motif DE_24h DE_24h-OSR1_MA1542.2 8 bp overlap
Motif ES_0h ES_0h-OSR1_MA1542.2 8 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 614 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 367 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 669 bp overlap
POLR2A 2 datasets
ChIP SK-N-MC ENCFF088IVG 491 bp overlap
ChIP SK-N-MC ENCFF088IVG 257 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 112 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 315 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 669 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 198 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 625 bp overlap
PRDM14 1 dataset
ChIP hESC GSE138674.PRDM14.hESC 161 bp overlap
RAD21 3 datasets
ChIP SK-N-SH ENCFF747MAS 201 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 283 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 187 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 186 bp overlap
RBBP5 1 dataset
ChIP H1 ENCFF905HFL 567 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 115 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 356 bp overlap
RING1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 392 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 626 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 384 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 135 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 194 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 242 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 488 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 297 bp overlap
SMARCA4 2 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 228 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 213 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 351 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 233 bp overlap
SUZ12 9 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 481 bp overlap
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 294 bp overlap
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 253 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 669 bp overlap
ChIP H1 ENCFF881NFR 669 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 128 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 518 bp overlap
ChIP NT2/D1 ENCFF574SXS 608 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 459 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 54 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 178 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 619 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 177 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 351 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 262 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 169 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF875HLX 352 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 497 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 439 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif DE_24h DE_24h-ZNF530_MA1981.2 14 bp overlap
ZNF574 1 dataset
Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF677 3 datasets
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
Motif DE_24h DE_24h-ZNF677_MA2101.1 12 bp overlap
Motif ES_0h ES_0h-ZNF677_MA2101.1 12 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap