chr6 : 15,874,076 – 15,874,650

574 bp 97 TFs 0 linked genes

This 574 bp open chromatin element has no linked target genes and is bound by 97 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

97 transcription factors

AHR 1 dataset

ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 124 bp overlap

ATF7 1 dataset

ChIP GM12878 ENCSR014YCR.ATF7.GM12878 349 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BHLHE40 1 dataset

ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 155 bp overlap

BRD4 3 datasets

ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 162 bp overlap

ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 180 bp overlap

ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 433 bp overlap

EBF1 3 datasets

ChIP GM12878 ENCFF167CZS 184 bp overlap

ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 209 bp overlap

ChIP LCL GSE75503.EBF1.LCL 140 bp overlap

ELF3 2 datasets

ChIP PDAC GSE64557.ELF3.PDAC 152 bp overlap

ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 53 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 269 bp overlap

ERF::SREBF2 1 dataset

Motif DE_12h DE_12h-ERFSREBF2_MA1939.2 16 bp overlap

ESR1 2 datasets

ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 207 bp overlap

ChIP breast_tumor_Male_5 GSE104399.ESR1.breast_tumor_Male_5 103 bp overlap

FOXA1 7 datasets

ChIP PDAC GSE64557.FOXA1.PDAC 186 bp overlap

ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 257 bp overlap

ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 263 bp overlap

ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 101 bp overlap

ChIP ZR751 GSE72249.FOXA1.ZR751 108 bp overlap

ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 132 bp overlap

ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 111 bp overlap

GATA6 5 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 394 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 437 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 356 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 437 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 407 bp overlap

HNF1B 1 dataset

ChIP PDAC GSE64557.HNF1B.PDAC 351 bp overlap

HOXB4 1 dataset

Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap

HOXC4 1 dataset

Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap

HOXD4 1 dataset

Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap

Hnf1A 1 dataset

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

IKZF1 3 datasets

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

ChIP GM12878 ENCFF753XDO 448 bp overlap

ChIP GM12878 ENCFF824TGK 482 bp overlap

IKZF2 3 datasets

ChIP GM12878 ENCFF238LYK 397 bp overlap

ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 202 bp overlap

ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 237 bp overlap

IRF1 1 dataset

ChIP PDAC GSE64557.IRF1.PDAC 226 bp overlap

JUN 2 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 345 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 307 bp overlap

KLF6 1 dataset

ChIP PDAC GSE64557.KLF6.PDAC 309 bp overlap

MAFF 1 dataset

Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap

MCM3 1 dataset

ChIP K-562 ENCSR990AZC.MCM3.K-562 214 bp overlap

MED26 1 dataset

ChIP HEK293T GSE121024.MED26.HEK293T 91 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MLLT1 1 dataset

ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 423 bp overlap

MTA2 2 datasets

ChIP GM12878 ENCFF615CWQ 412 bp overlap

ChIP GM12878 ENCSR293QAR.MTA2.GM12878 311 bp overlap

MXI1 2 datasets

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

ChIP GM12878 ENCFF666NJR 184 bp overlap

Mafb 1 dataset

Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap

NANOG 2 datasets

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 574 bp overlap

ChIP hESC GSE18292.NANOG.hESC 94 bp overlap

NBN 1 dataset

ChIP GM12878 ENCSR278SQL.NBN.GM12878 306 bp overlap

NFATC3 1 dataset

ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 446 bp overlap

NFKB1 1 dataset

ChIP L1236 GSE63736.NFKB1.L1236 121 bp overlap

NFKB2 1 dataset

ChIP L1236 GSE63736.NFKB2.L1236 128 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 72 bp overlap

NKX6-3 1 dataset

Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap

NR2C1 1 dataset

Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap

NR2F1 1 dataset

Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap

NRL 1 dataset

Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Nr1H2 1 dataset

Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap

OSR1 1 dataset

Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap

OSR2 1 dataset

Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PGR 1 dataset

ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 180 bp overlap

PHOX2A 1 dataset

Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap

PLAG1 1 dataset

Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 93 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 53 bp overlap

POU6F1 1 dataset

Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap

POU6F2 1 dataset

Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap

Plagl1 1 dataset

Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap

RB1 1 dataset

ChIP GM12878 ENCSR785OKZ.RB1.GM12878 271 bp overlap

REL 1 dataset

Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap

RELA 2 datasets

Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap

ChIP GM12878 ENCSR664POU.RELA.GM12878 181 bp overlap

RELB 2 datasets

ChIP GM12878 ENCFF217ADF 139 bp overlap

ChIP GM12878 ENCSR387QUV.RELB.GM12878 574 bp overlap

RNF2 1 dataset

ChIP fibroblast GSE139053.RNF2.fibroblast 244 bp overlap

Rarg 1 dataset

Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap

SKIL 1 dataset

ChIP GM12878 ENCSR212YKD.SKIL.GM12878 265 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 469 bp overlap

SMARCA5 2 datasets

ChIP GM12878 ENCFF327LDR 437 bp overlap

ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 192 bp overlap

SMARCB1 1 dataset

ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 231 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 336 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 216 bp overlap

SOX4 1 dataset

Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap

SREBF1 1 dataset

Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap

SREBF2 1 dataset

Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap

Sox11 1 dataset

Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap

Sox17 1 dataset

Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap

Sox6 1 dataset

Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap

Sox7 1 dataset

Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 181 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 311 bp overlap

TARDBP 1 dataset

ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 574 bp overlap

TBX21 1 dataset

ChIP GM12878 ENCSR739IHN.TBX21.GM12878 108 bp overlap

TCF7L1 1 dataset

Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap

TCF7L2 2 datasets

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

TFAP2A 1 dataset

Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap

TFAP2C 1 dataset

Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap

TFAP4 1 dataset

Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

THRB 1 dataset

Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap

TRIM22 1 dataset

ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 221 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

ZBTB33 1 dataset

ChIP GM12878 ENCSR542FLV.ZBTB33.GM12878 319 bp overlap

ZNF135 1 dataset

Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap

ZNF24 1 dataset

ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 159 bp overlap

ZNF264 1 dataset

ChIP HEK293 GSE76494.ZNF264.HEK293 151 bp overlap

ZNF687 2 datasets

ChIP GM12878 ENCFF233SGE 457 bp overlap

ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 568 bp overlap

ZNF692 1 dataset

Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap

ZNF701 1 dataset

Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap

ZNF768 1 dataset

Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap

ZSCAN4 1 dataset

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap