chr6 : 6,772,723 6,773,269
546 bp 107 TFs 0 linked genes
This 546 bp open chromatin element has no linked target genes and is bound by 107 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:6,767,723 – 6,778,269
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
107 transcription factors
Source
Cell type
AR 2 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 392 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 307 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 345 bp overlap
BCL6 1 dataset
Motif DE_60h DE_60h-BCL6_MA0463.3 13 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 209 bp overlap
BRD4 11 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 180 bp overlap
ChIP CLL_patient1_4h_CpG_BET GSE109411.BRD4.CLL_patient1_4h_CpG_BET 283 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 282 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 262 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 469 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 272 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 418 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 201 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 244 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 544 bp overlap
Bcl11B 1 dataset
Motif DE_72h DE_72h-Bcl11B_MA1989.2 9 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 349 bp overlap
E2F6 2 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 234 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 242 bp overlap
ESR1 10 datasets
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 226 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 409 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 397 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 395 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 376 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 333 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 285 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 361 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 392 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 222 bp overlap
FEZF2 1 dataset
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
FIGLA 1 dataset
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 274 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 163 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 141 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 178 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 197 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 211 bp overlap
GATA2 2 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 317 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 339 bp overlap
ChIP DE DE-GATA4-2 440 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 237 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 329 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 344 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 319 bp overlap
ChIP DE DE-GATA6-2 465 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 299 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 355 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 301 bp overlap
ChIP foregut GSE117136.GATA6.foregut 404 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 297 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 242 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 306 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 322 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 411 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 451 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 502 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 246 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 436 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 306 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 257 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 247 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 188 bp overlap
Hand1 2 datasets
Motif DE_60h DE_60h-Hand1_MA2123.1 9 bp overlap
Motif DE_72h DE_72h-Hand1_MA2123.1 9 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 509 bp overlap
ChIP K562 ENCFF348IBL 376 bp overlap
ChIP K562 ENCFF771OHZ 379 bp overlap
IKZF2 1 dataset
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 205 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 234 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 278 bp overlap
MAFF 1 dataset
Motif DE_72h DE_72h-MAFF_MA0495.4 11 bp overlap
MAX 5 datasets
ChIP Ishikawa ENCFF064TDQ 394 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 235 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 306 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 439 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 427 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 116 bp overlap
MED1 3 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 355 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 371 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 339 bp overlap
MEF2A 1 dataset
Motif DE_60h DE_60h-MEF2A_MA0052.5 10 bp overlap
MEF2C 1 dataset
Motif DE_60h DE_60h-MEF2C_MA0497.2 11 bp overlap
MXI1 1 dataset
Motif DE_72h DE_72h-MXI1_MA1108.3 6 bp overlap
MYB 1 dataset
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
MYC 3 datasets
ChIP K-562 ENCSR000EGJ.MYC.K-562 120 bp overlap
ChIP NCI-H128 GSE41105.MYC.NCI-H128 181 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 371 bp overlap
MYCN 1 dataset
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 248 bp overlap
MYOD1 1 dataset
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
Msgn1 2 datasets
Motif DE_60h DE_60h-Msgn1_MA1524.3 10 bp overlap
Motif DE_72h DE_72h-Msgn1_MA1524.3 10 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 163 bp overlap
NCOR1 1 dataset
ChIP HEK293T_SICTR GSE35197.NCOR1.HEK293T_SICTR 205 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 266 bp overlap
NFIB 2 datasets
Motif DE_60h DE_60h-NFIB_MA1643.2 17 bp overlap
Motif DE_72h DE_72h-NFIB_MA1643.2 17 bp overlap
NFIC 6 datasets
Motif DE_60h DE_60h-NFIC_MA1527.2 15 bp overlap
Motif DE_72h DE_72h-NFIC_MA1527.2 15 bp overlap
ChIP Ishikawa ENCFF029AAD 381 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 267 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 211 bp overlap
ChIP K562 ENCFF167YID 439 bp overlap
NFIC::TLX1 2 datasets
Motif DE_60h DE_60h-NFICTLX1_MA0119.1 14 bp overlap
Motif DE_72h DE_72h-NFICTLX1_MA0119.1 14 bp overlap
NFIX 2 datasets
Motif DE_60h DE_60h-NFIX_MA1528.2 14 bp overlap
Motif DE_72h DE_72h-NFIX_MA1528.2 14 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 155 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 219 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 100 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1620.2 8 bp overlap
RAD21 3 datasets
ChIP Ishikawa ENCFF570JVV 225 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 174 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 140 bp overlap
RBPJ 3 datasets
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 376 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 220 bp overlap
SNAI2 1 dataset
Motif DE_72h DE_72h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_72h DE_72h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 259 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 345 bp overlap
Smad4 1 dataset
Motif DE_60h DE_60h-Smad4_MA1153.2 7 bp overlap
Sox11 2 datasets
Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Sox6 2 datasets
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
Stat6 2 datasets
Motif DE_60h DE_60h-Stat6_MA0520.2 10 bp overlap
Motif DE_72h DE_72h-Stat6_MA0520.2 10 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 210 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 189 bp overlap
TBP 3 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP K-562 GSE55306.TBP.K-562 246 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 291 bp overlap
TBX5 1 dataset
Motif DE_72h DE_72h-TBX5_MA0807.1 8 bp overlap
TCF12 3 datasets
ChIP Ishikawa ENCFF467DDW 438 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 204 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 186 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 107 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 91 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 236 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
UBTF 2 datasets
ChIP K562 ENCFF174SPM 367 bp overlap
ChIP K562 ENCFF174SPM 388 bp overlap
VEZF1 1 dataset
Motif DE_72h DE_72h-VEZF1_MA1578.2 6 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 118 bp overlap
ZBTB12 2 datasets
Motif DE_60h DE_60h-ZBTB12_MA1649.2 7 bp overlap
Motif DE_72h DE_72h-ZBTB12_MA1649.2 7 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 246 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 374 bp overlap
ZBTB26 2 datasets
Motif DE_60h DE_60h-ZBTB26_MA1579.2 8 bp overlap
Motif DE_72h DE_72h-ZBTB26_MA1579.2 8 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 271 bp overlap
ZEB1 1 dataset
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 156 bp overlap
ZFP14 1 dataset
Motif DE_60h DE_60h-ZFP14_MA1972.1 15 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 251 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 267 bp overlap
ZNF184 1 dataset
Motif DE_72h DE_72h-ZNF184_MA2120.1 13 bp overlap
ZNF257 1 dataset
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
ZNF263 5 datasets
ChIP HEK293 ENCFF336CWQ 359 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 150 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 371 bp overlap
ChIP WTC11 ENCFF893RTM 379 bp overlap
ChIP WTC11 ENCFF893RTM 402 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 180 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 162 bp overlap
ZNF677 1 dataset
Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap
ZNF682 1 dataset
Motif DE_60h DE_60h-ZNF682_MA1599.2 11 bp overlap
ZNF708 1 dataset
Motif DE_60h DE_60h-ZNF708_MA1730.2 9 bp overlap
ZNF740 1 dataset
Motif DE_72h DE_72h-ZNF740_MA0753.3 10 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 148 bp overlap
Zfp809 3 datasets
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap
Motif DE_72h DE_72h-Zfp809_MA2125.1 9 bp overlap
Motif DE_72h DE_72h-Zfp809_MA2125.1 9 bp overlap
Zfx 1 dataset
Motif DE_60h DE_60h-Zfx_MA0146.3 10 bp overlap
Zic3 1 dataset
Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap