chr5 : 134,007,983 – 134,008,348
365 bp 98 TFs 2 linked genes
This 365 bp open chromatin element is linked to ENSG00000271737 and VDAC1 and is bound by 98 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000271737 3.1 kb Proximal Proximity
VDAC1 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:134,002,983 – 134,013,348
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
98 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 219 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 155 bp overlap
ATF3 2 datasets
ChIP H1 ENCFF852GZY 206 bp overlap
ChIP WA01 ENCSR000BKC.ATF3.WA01 154 bp overlap
BARX1 2 datasets
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif DE_24h DE_24h-BARX1_MA0875.2 6 bp overlap
BCL11A 3 datasets
Motif DE_12h DE_12h-BCL11A_MA2324.1 7 bp overlap
Motif DE_12h DE_12h-BCL11A_MA2324.1 7 bp overlap
Motif DE_24h DE_24h-BCL11A_MA2324.1 7 bp overlap
BRD4 3 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 57 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 101 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 338 bp overlap
BSX 2 datasets
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif DE_24h DE_24h-BSX_MA0876.2 6 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 291 bp overlap
CHD2 1 dataset
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 111 bp overlap
DLX1 2 datasets
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif DE_24h DE_24h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif DE_24h DE_24h-DLX6_MA0882.2 6 bp overlap
DPF1 2 datasets
ChIP K-562 GSE97661.DPF1.K-562 181 bp overlap
ChIP MCF-7 GSE97661.DPF1.MCF-7 186 bp overlap
Dlx2 2 datasets
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Motif DE_24h DE_24h-Dlx2_MA0885.3 8 bp overlap
Dlx3 2 datasets
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif DE_24h DE_24h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif DE_24h DE_24h-Dlx4_MA0881.2 6 bp overlap
Dlx5 2 datasets
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
Motif DE_24h DE_24h-Dlx5_MA1476.3 8 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 116 bp overlap
EGR1 17 datasets
ChIP H1 ENCFF451BLH 256 bp overlap
ChIP HCT-116 ENCSR000BRZ.EGR1.HCT-116 272 bp overlap
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 365 bp overlap
ChIP HepG2 ENCFF674RQO 143 bp overlap
ChIP Ishikawa ENCFF550FKT 190 bp overlap
ChIP Ishikawa ENCSR000BSQ.EGR1.Ishikawa 276 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 365 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 354 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 292 bp overlap
ChIP K562 ENCFF006PJY 193 bp overlap
ChIP K562 ENCFF113OPQ 325 bp overlap
ChIP K562 ENCFF895KGN 338 bp overlap
ChIP MCF-7 ENCFF679ZBN 111 bp overlap
ChIP MCF-7 ENCSR000BUX.EGR1.MCF-7 214 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 214 bp overlap
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 257 bp overlap
ChIP fibroblast_DOX-CLOB-24h GSE134924.EGR1.fibroblast_DOX-CLOB-24h 260 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 345 bp overlap
EN2 2 datasets
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
Motif DE_24h DE_24h-EN2_MA0642.3 7 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 145 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 127 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 201 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 54 bp overlap
ChIP K562 ENCFF830LLA 88 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 78 bp overlap
GATA3 1 dataset
ChIP MCF-7 ENCFF352QVM 72 bp overlap
GATA4 1 dataset
ChIP A-549 GSE85002.GATA4.A-549 52 bp overlap
GBX1 2 datasets
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
Motif DE_24h DE_24h-GBX1_MA0889.2 7 bp overlap
GBX2 2 datasets
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif DE_24h DE_24h-GBX2_MA0890.2 6 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 220 bp overlap
HESX1 2 datasets
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif DE_24h DE_24h-HESX1_MA0894.2 6 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 104 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 103 bp overlap
HOXA7 2 datasets
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif DE_24h DE_24h-HOXA7_MA1498.3 6 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 105 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 106 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF15 1 dataset
ChIP HEK293 GSE76494.KLF15.HEK293 140 bp overlap
KLF3 1 dataset
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 142 bp overlap
KMT2B-D 1 dataset
ChIP SW480 GSE115985.KMT2B-D.SW480 298 bp overlap
LBX1 2 datasets
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
Motif DE_24h DE_24h-LBX1_MA0618.2 7 bp overlap
LBX2 2 datasets
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif DE_24h DE_24h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif DE_24h DE_24h-LHX2_MA0700.3 6 bp overlap
LHX9 2 datasets
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
Motif DE_24h DE_24h-LHX9_MA0701.3 7 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 115 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCFF994GSG 355 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 137 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 62 bp overlap
MSX1 2 datasets
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif DE_24h DE_24h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif DE_24h DE_24h-MSX2_MA0708.3 6 bp overlap
MXI1 2 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
MYCN 2 datasets
ChIP BE2C GSE80151.MYCN.BE2C 238 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 226 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Msx3 2 datasets
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif DE_24h DE_24h-Msx3_MA0709.2 6 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 146 bp overlap
NFYA 2 datasets
ChIP HeLa-S3 ENCSR000DNS.NFYA.HeLa-S3 152 bp overlap
ChIP K-562 GSE26439.NFYA.K-562 203 bp overlap
NFYB 1 dataset
ChIP K-562 GSE26439.NFYB.K-562 242 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 189 bp overlap
Nobox 2 datasets
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif DE_24h DE_24h-Nobox_MA0125.2 6 bp overlap
Nr2e3 2 datasets
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_24h DE_24h-Nr2e3_MA0164.2 6 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 250 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 357 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 247 bp overlap
ChIP PFSK-1 ENCFF576NIT 292 bp overlap
PRDM10 3 datasets
ChIP HEK293 ENCFF145WQQ 365 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 104 bp overlap
ChIP K562 ENCFF740YLK 252 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 203 bp overlap
PRRX2 2 datasets
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
Motif DE_24h DE_24h-PRRX2_MA0075.4 7 bp overlap
Prdm14 1 dataset
Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap
RAD51 2 datasets
ChIP K-562 ENCSR524BUE.RAD51.K-562 138 bp overlap
ChIP K562 ENCFF133ELP 284 bp overlap
RAX 2 datasets
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif DE_24h DE_24h-RAX_MA0718.2 6 bp overlap
RBM22 1 dataset
ChIP HepG2 ENCFF292RVQ 167 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 119 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 313 bp overlap
SP1 4 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 121 bp overlap
ChIP HEK293 GSE76494.SP1.HEK293 219 bp overlap
ChIP HEK293T ERP007114.SP1.HEK293T 365 bp overlap
ChIP WTC11 ENCFF688PEU 333 bp overlap
SP2 5 datasets
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
ChIP HEK293 ENCFF181QXT 291 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 303 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 205 bp overlap
ChIP HEK293T ERP007114.SP2.HEK293T 255 bp overlap
SP3 4 datasets
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
ChIP HEK293 ENCFF087XLA 190 bp overlap
ChIP HEK293 ENCFF087XLA 258 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 348 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 311 bp overlap
SPI1 1 dataset
ChIP K-562 GSE70482.SPI1.K-562 73 bp overlap
SUPT5H 1 dataset
ChIP HeLa GSE125534.SUPT5H.HeLa 74 bp overlap
Stat5a::Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 365 bp overlap
TCF21 2 datasets
Motif DE_12h DE_12h-TCF21_MA1568.2 10 bp overlap
Motif DE_24h DE_24h-TCF21_MA1568.2 10 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 365 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 365 bp overlap
USF1 20 datasets
ChIP A-549 ENCSR000BJB.USF1.A-549 161 bp overlap
ChIP A-549 ENCSR000BPV.USF1.A-549 171 bp overlap
ChIP A-549 ENCSR000BHX.USF1.A-549 167 bp overlap
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
Motif DE_24h DE_24h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 181 bp overlap
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 196 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF201JKA 180 bp overlap
ChIP HepG2 ENCFF807KYJ 100 bp overlap
ChIP Ishikawa ENCFF728IEG 176 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 180 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 197 bp overlap
ChIP K562 ENCFF202SFC 286 bp overlap
ChIP K562 ENCFF633EZB 146 bp overlap
ChIP SK-N-SH ENCFF967PDP 171 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 238 bp overlap
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 190 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 211 bp overlap
ChIP WTC11 ENCFF699QGS 153 bp overlap
USF2 18 datasets
ChIP A-549 ENCSR563FBT.USF2.A-549 159 bp overlap
ChIP A549 ENCFF343KII 242 bp overlap
ChIP GM12878 GSE97661.USF2.GM12878 184 bp overlap
ChIP H1 ENCFF434EDF 84 bp overlap
ChIP HeLa-S3 ENCFF765YUZ 213 bp overlap
ChIP HeLa-S3 ENCSR000ECW.USF2.HeLa-S3 153 bp overlap
ChIP Hep-G2 GSE97661.USF2.Hep-G2 183 bp overlap
ChIP Hep-G2 ENCSR000EEF.USF2.Hep-G2 127 bp overlap
ChIP HepG2 ENCFF671JRC 229 bp overlap
ChIP IMR-90 ENCFF438KUN 114 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 183 bp overlap
ChIP K-562 GSE111469.USF2.K-562 256 bp overlap
ChIP K-562 ENCSR578KEN.USF2.K-562 178 bp overlap
ChIP K562 ENCFF397QGU 120 bp overlap
ChIP K562 ENCFF495XTL 197 bp overlap
ChIP SK-N-SH ENCSR945NFL.USF2.SK-N-SH 142 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 186 bp overlap
ChIP WTC11 ENCFF139JAW 219 bp overlap
VENTX 2 datasets
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
Motif DE_24h DE_24h-VENTX_MA0724.1 9 bp overlap
VEZF1 3 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 169 bp overlap
ChIP K562 ENCFF053XDV 365 bp overlap
ChIP K562 ENCFF053XDV 135 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 88 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 311 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap
ZNF16 1 dataset
Motif DE_24h DE_24h-ZNF16_MA1654.2 21 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF273 1 dataset
ChIP HEK293T GSE78099.ZNF273.HEK293T 149 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF324 2 datasets
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
Motif DE_24h DE_24h-ZNF324_MA1977.2 14 bp overlap
ZNF335 3 datasets
ChIP HEK293 ENCFF784SLD 338 bp overlap
ChIP HEK293 ENCFF784SLD 133 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 122 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF558 1 dataset
ChIP HEK293T GSE78099.ZNF558.HEK293T 254 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
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