chr5 : 119,316,153 119,316,863
710 bp 112 TFs 4 linked genes
This 710 bp open chromatin element is linked to 4 target genes and is bound by 112 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
TNFAIP8 47.7 kb Distal Multiome
HSD17B4 136.0 kb Distal Multiome
DMXL1 245.4 kb Distal Multiome
DMXL1-DT 245.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:119,311,153 – 119,321,863
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
112 transcription factors
Source
Cell type
ATF3 4 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 278 bp overlap
ChIP K562 ENCFF604FPV 223 bp overlap
ChIP K562 ENCFF921JQW 413 bp overlap
ChIP K562 ENCFF921JQW 612 bp overlap
ATF7 3 datasets
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 225 bp overlap
ChIP K-562 ENCSR972ZBV.ATF7.K-562 246 bp overlap
ChIP K562 ENCFF308SKS 367 bp overlap
Ahr::Arnt 2 datasets
Motif DE_48h DE_48h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap
Arid3a 2 datasets
Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap
Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap
BACH1 2 datasets
ChIP K562 ENCFF419VIM 226 bp overlap
ChIP K562 ENCFF419VIM 611 bp overlap
BRD4 6 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 115 bp overlap
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 273 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 222 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 226 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 60 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 253 bp overlap
CTCF 18 datasets
ChIP B cell ENCFF500PZO 233 bp overlap
ChIP C4-2B ENCFF821XVN 118 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 62 bp overlap
ChIP HCT116 ENCFF003KHP 121 bp overlap
ChIP KMS-11 ENCFF853JKX 195 bp overlap
ChIP NCI-H929 ENCFF305JAB 71 bp overlap
ChIP Panc1 ENCFF056JQX 50 bp overlap
ChIP SK-N-SH ENCFF575DMG 137 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 170 bp overlap
ChIP brain ENCFF067KUH 77 bp overlap
ChIP brain ENCFF685VRG 227 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 147 bp overlap
ChIP natural killer cell ENCFF517SNI 217 bp overlap
ChIP prostate gland ENCFF979KAF 64 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 107 bp overlap
ChIP spleen ENCFF139JDN 68 bp overlap
ChIP spleen ENCFF326DUY 147 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 179 bp overlap
CUX1 3 datasets
Motif DE_48h DE_48h-CUX1_MA0754.3 9 bp overlap
Motif DE_60h DE_60h-CUX1_MA0754.3 9 bp overlap
ChIP K562 ENCFF902MYN 195 bp overlap
CUX2 2 datasets
Motif DE_48h DE_48h-CUX2_MA0755.2 9 bp overlap
Motif DE_60h DE_60h-CUX2_MA0755.2 9 bp overlap
Crx 2 datasets
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
DUX4 2 datasets
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
DUXA 2 datasets
Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Dux 2 datasets
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 100 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 57 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 145 bp overlap
EOMES 2 datasets
Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 299 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 51 bp overlap
ESRRA 1 dataset
ChIP K562 ENCFF968PEP 128 bp overlap
FIGLA 2 datasets
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 546 bp overlap
ChIP DE DE-FOXA2-2 577 bp overlap
FOXC1 3 datasets
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
Motif DE_72h DE_72h-FOXC1_MA0032.2 11 bp overlap
FOXC2 3 datasets
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
Motif DE_72h DE_72h-FOXC2_MA0846.2 11 bp overlap
FOXE1 3 datasets
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXH1 3 datasets
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
Motif DE_72h DE_72h-FOXH1_MA0479.2 8 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 670 bp overlap
ChIP DE DE-GATA4-2 710 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 706 bp overlap
ChIP DE DE-GATA6-2 710 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 339 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 673 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 342 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 260 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 538 bp overlap
GLI3 2 datasets
Motif DE_48h DE_48h-GLI3_MA1491.3 15 bp overlap
Motif DE_60h DE_60h-GLI3_MA1491.3 15 bp overlap
GSC 2 datasets
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Gfi1B 1 dataset
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
Gli2 2 datasets
Motif DE_48h DE_48h-Gli2_MA0734.4 9 bp overlap
Motif DE_60h DE_60h-Gli2_MA0734.4 9 bp overlap
Hmx2 2 datasets
Motif DE_48h DE_48h-Hmx2_MA0897.2 15 bp overlap
Motif DE_60h DE_60h-Hmx2_MA0897.2 15 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 195 bp overlap
JUN::JUNB 2 datasets
Motif DE_48h DE_48h-JUNJUNB_MA1132.2 8 bp overlap
Motif DE_60h DE_60h-JUNJUNB_MA1132.2 8 bp overlap
JUNB 2 datasets
ChIP CD4 GSE116695.JUNB.CD4 59 bp overlap
ChIP CD4 GSE116695.JUNB.CD4 191 bp overlap
JUND 1 dataset
ChIP K562 ENCFF336RCR 59 bp overlap
Lhx3 2 datasets
Motif DE_48h DE_48h-Lhx3_MA0135.2 12 bp overlap
Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap
MGA 2 datasets
Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap
Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 220 bp overlap
MYB 1 dataset
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 241 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 103 bp overlap
NBN 1 dataset
ChIP GM12878 ENCFF213ZNN 94 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCFF259FWL 117 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 710 bp overlap
NR4A1 1 dataset
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 73 bp overlap
ONECUT1 2 datasets
Motif DE_48h DE_48h-ONECUT1_MA0679.3 9 bp overlap
Motif DE_60h DE_60h-ONECUT1_MA0679.3 9 bp overlap
ONECUT3 2 datasets
Motif DE_48h DE_48h-ONECUT3_MA0757.2 12 bp overlap
Motif DE_60h DE_60h-ONECUT3_MA0757.2 12 bp overlap
OTX1 2 datasets
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
PAX3 2 datasets
Motif DE_48h DE_48h-PAX3_MA0780.1 10 bp overlap
Motif DE_60h DE_60h-PAX3_MA0780.1 10 bp overlap
PAX5 1 dataset
ChIP OCI-Ly7 GSE69558.PAX5.OCI-Ly7 209 bp overlap
PHOX2A 2 datasets
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
PITX1 2 datasets
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
POU4F1 2 datasets
Motif DE_48h DE_48h-POU4F1_MA0790.2 12 bp overlap
Motif DE_60h DE_60h-POU4F1_MA0790.2 12 bp overlap
POU4F2 2 datasets
Motif DE_48h DE_48h-POU4F2_MA0683.2 15 bp overlap
Motif DE_60h DE_60h-POU4F2_MA0683.2 15 bp overlap
POU4F3 2 datasets
Motif DE_48h DE_48h-POU4F3_MA0791.2 12 bp overlap
Motif DE_60h DE_60h-POU4F3_MA0791.2 12 bp overlap
PROP1 2 datasets
Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
Pax7 2 datasets
Motif DE_48h DE_48h-Pax7_MA0680.3 10 bp overlap
Motif DE_60h DE_60h-Pax7_MA0680.3 10 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap
REST 1 dataset
ChIP K562 ENCFF688UKW 103 bp overlap
RHOXF1 2 datasets
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCFF171OVM 78 bp overlap
SMAD1 1 dataset
ChIP GM12878 ENCSR813DCK.SMAD1.GM12878 77 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 262 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 710 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 418 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 342 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 375 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 316 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 676 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 671 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 244 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 301 bp overlap
SMARCA5 3 datasets
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 157 bp overlap
ChIP K562 ENCFF936KHY 190 bp overlap
ChIP K562 ENCFF936KHY 402 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 356 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 589 bp overlap
SP5 2 datasets
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 216 bp overlap
TBR1 1 dataset
Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap
TBX1 2 datasets
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
TBX15 2 datasets
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
TBX18 2 datasets
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
TBX21 1 dataset
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
TBX4 2 datasets
Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap
Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
TCF4 1 dataset
Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap
TFAP2A 1 dataset
Motif DE_60h DE_60h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif DE_60h DE_60h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_60h DE_60h-TFAP2E_MA1569.2 9 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCFF919OMX 109 bp overlap
Tbx6 1 dataset
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
ZBTB17 2 datasets
Motif DE_48h DE_48h-ZBTB17_MA2102.1 8 bp overlap
Motif DE_60h DE_60h-ZBTB17_MA2102.1 8 bp overlap
ZBTB18 1 dataset
Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap
ZEB1 2 datasets
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZEB2 1 dataset
ChIP K562 ENCFF975RXS 308 bp overlap
ZMYM3 3 datasets
ChIP GM12878 GSE97661.ZMYM3.GM12878 281 bp overlap
ChIP K562 ENCFF361LXT 236 bp overlap
ChIP K562 ENCFF361LXT 381 bp overlap
ZNF135 2 datasets
Motif DE_48h DE_48h-ZNF135_MA1587.1 14 bp overlap
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
ZNF175 1 dataset
ChIP K562 ENCFF497AEJ 348 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 103 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 303 bp overlap
ZNF460 2 datasets
Motif DE_48h DE_48h-ZNF460_MA1596.1 16 bp overlap
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
ZNF528 2 datasets
Motif DE_48h DE_48h-ZNF528_MA1597.1 17 bp overlap
Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap
ZNF582 1 dataset
Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap
ZNF639 2 datasets
ChIP K562 ENCFF271FQR 330 bp overlap
ChIP K562 ENCFF271FQR 708 bp overlap
ZNF675 2 datasets
Motif DE_48h DE_48h-ZNF675_MA1714.2 19 bp overlap
Motif DE_60h DE_60h-ZNF675_MA1714.2 19 bp overlap
ZNF75A 1 dataset
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF770 4 datasets
ChIP HEK293 ENCFF468FCG 277 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 387 bp overlap
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 280 bp overlap
ChIP HepG2 ENCFF233UVH 416 bp overlap
ZNF816 3 datasets
Motif DE_48h DE_48h-ZNF816_MA1719.2 15 bp overlap
Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap
Motif DE_72h DE_72h-ZNF816_MA1719.2 15 bp overlap
Znf423 2 datasets
Motif DE_48h DE_48h-Znf423_MA0116.1 15 bp overlap
Motif DE_60h DE_60h-Znf423_MA0116.1 15 bp overlap