chr5 : 88,722,625 – 88,723,101

476 bp 104 TFs 0 linked genes

This 476 bp open chromatin element has no linked target genes and is bound by 104 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

104 transcription factors

ARNT 1 dataset

ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 229 bp overlap

ASCL1 2 datasets

Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap

Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 222 bp overlap

Ahr::Arnt 1 dataset

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

Ascl2 2 datasets

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap

BHLHE22 2 datasets

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap

BRD4 3 datasets

ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-075 138 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 476 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 444 bp overlap

Bhlha15 2 datasets

Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap

Motif ES_0h ES_0h-Bhlha15_MA1472.3 8 bp overlap

CBX7 1 dataset

ChIP hESC GSE133412.CBX7.hESC 340 bp overlap

CDK6 1 dataset

ChIP KB_IL GSE52469.CDK6.KB_IL 91 bp overlap

CTCF 4 datasets

ChIP RH4 GSE83726.CTCF.RH4 168 bp overlap

ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 158 bp overlap

ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 288 bp overlap

ChIP erythroid GSE67783.CTCF.erythroid 169 bp overlap

E2F1 1 dataset

ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 161 bp overlap

E2F6 1 dataset

ChIP WA01 ENCSR000BSI.E2F6.WA01 198 bp overlap

EED 1 dataset

ChIP ProEs GSE59087.EED.ProEs 253 bp overlap

ELK1::HOXA1 1 dataset

Motif DE_12h DE_12h-ELK1HOXA1_MA1931.1 14 bp overlap

ERF::FOXO1 2 datasets

Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap

Motif ES_0h ES_0h-ERFFOXO1_MA1936.2 12 bp overlap

ETS1 2 datasets

ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 100 bp overlap

ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 100 bp overlap

ETV5::FOXI1 2 datasets

Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap

Motif ES_0h ES_0h-ETV5FOXI1_MA1946.2 12 bp overlap

ETV5::FOXO1 2 datasets

Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap

Motif ES_0h ES_0h-ETV5FOXO1_MA1947.2 10 bp overlap

EZH2 1 dataset

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 244 bp overlap

FLI1::DRGX 1 dataset

Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap

FLI1::FOXI1 2 datasets

Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap

Motif ES_0h ES_0h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXA2 1 dataset

ChIP pancreas_CARN1618 ERP008682.FOXA2.pancreas_CARN1618 73 bp overlap

FOXO1-PAX3 2 datasets

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 476 bp overlap

ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 267 bp overlap

FOXO1::ELF1 2 datasets

Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap

Motif ES_0h ES_0h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 2 datasets

Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap

Motif ES_0h ES_0h-FOXO1ELK1_MA1954.2 13 bp overlap

FOXO1::ELK3 2 datasets

Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap

Motif ES_0h ES_0h-FOXO1ELK3_MA1955.2 13 bp overlap

FOXO1::FLI1 2 datasets

Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap

Motif ES_0h ES_0h-FOXO1FLI1_MA1956.2 13 bp overlap

FOXO6 2 datasets

Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap

Motif ES_0h ES_0h-FOXO6_MA0849.1 7 bp overlap

FOXP1 1 dataset

ChIP LNCaP GSE62492.FOXP1.LNCaP 109 bp overlap

GATA4 1 dataset

ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 179 bp overlap

GSPT2 1 dataset

ChIP HEK293T GSE35197.GSPT2.HEK293T 208 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 344 bp overlap

HDAC2 2 datasets

ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 411 bp overlap

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 476 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 296 bp overlap

HES1 1 dataset

Motif DE_12h DE_12h-HES1_MA1099.3 8 bp overlap

HES2 1 dataset

Motif DE_12h DE_12h-HES2_MA0616.3 9 bp overlap

HEY1 1 dataset

Motif DE_12h DE_12h-HEY1_MA0823.1 10 bp overlap

KDM4A 1 dataset

ChIP WA01 ENCSR000AVC.KDM4A.WA01 230 bp overlap

KLF11 1 dataset

Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap

KLF12 2 datasets

Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap

Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap

KLF13 1 dataset

Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap

KLF14 1 dataset

Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap

KLF16 1 dataset

Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap

KLF17 2 datasets

Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap

KLF5 1 dataset

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

MAX 2 datasets

ChIP H1 ENCFF914VQY 342 bp overlap

ChIP WTC11 ENCFF223QFY 387 bp overlap

MED1 3 datasets

ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 158 bp overlap

ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 187 bp overlap

ChIP RH4 GSE83726.MED1.RH4 410 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

MEIS2 2 datasets

Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap

Motif ES_0h ES_0h-MEIS2_MA0774.1 8 bp overlap

MEIS3 2 datasets

Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap

Motif ES_0h ES_0h-MEIS3_MA0775.2 7 bp overlap

MSC 2 datasets

Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap

Motif ES_0h ES_0h-MSC_MA0665.1 10 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 180 bp overlap

MYF5 2 datasets

Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap

Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap

MYOD1 1 dataset

ChIP RH4 GSE83726.MYOD1.RH4 280 bp overlap

MYOG 3 datasets

Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap

Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap

ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 206 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 187 bp overlap

NFKB1 1 dataset

ChIP L1236 GSE63736.NFKB1.L1236 78 bp overlap

NHLH1 2 datasets

Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap

Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap

NRIP1 1 dataset

ChIP MCF-7 ERP005838.NRIP1.MCF-7 150 bp overlap

NUTM1 1 dataset

ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 476 bp overlap

Neurod2 2 datasets

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap

Olig2 2 datasets

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap

PATZ1 2 datasets

Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap

Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 274 bp overlap

PLAG1 1 dataset

Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap

POLR2A 2 datasets

ChIP spleen ENCFF044PYR 359 bp overlap

ChIP spleen ENCFF446ZGT 250 bp overlap

POU2F1 1 dataset

ChIP T-47D GSE148277.POU2F1.T-47D 203 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap

POU5F1 2 datasets

ChIP BG03 GSE21614.POU5F1.BG03 179 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 162 bp overlap

Prdm14 1 dataset

Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap

Prdm4 1 dataset

Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap

Ptf1A 2 datasets

Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap

Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap

RAD21 1 dataset

ChIP RH4 GSE83726.RAD21.RH4 235 bp overlap

RNF2 1 dataset

ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 426 bp overlap

RREB1 1 dataset

Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap

SCRT1 2 datasets

Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap

Motif ES_0h ES_0h-SCRT1_MA0743.3 10 bp overlap

SCRT2 2 datasets

Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap

Motif ES_0h ES_0h-SCRT2_MA0744.3 10 bp overlap

SIN3A 2 datasets

ChIP WA01 ENCSR000EBO.SIN3A.WA01 142 bp overlap

ChIP WA01 ENCSR000BIS.SIN3A.WA01 109 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 102 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 276 bp overlap

SOX8 1 dataset

ChIP RH4 GSE116344.SOX8.RH4 302 bp overlap

SP2 2 datasets

Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap

Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap

SP3 1 dataset

Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap

SP4 1 dataset

Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap

SP8 1 dataset

Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap

SP9 1 dataset

Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap

SUZ12 1 dataset

ChIP hiPSC GSE124903.SUZ12.hiPSC 193 bp overlap

TBL1X 1 dataset

ChIP HEK293T GSE35197.TBL1X.HEK293T 189 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

Tcf12 2 datasets

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap

Tcf21 2 datasets

Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap

Motif ES_0h ES_0h-Tcf21_MA0832.2 10 bp overlap

Twist2 2 datasets

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap

Wt1 1 dataset

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 307 bp overlap

ZBTB6 2 datasets

Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap

Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap

ZNF140 1 dataset

Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap

ZNF148 1 dataset

Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap

ZNF281 1 dataset

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

ZNF282 1 dataset

Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap

ZNF382 1 dataset

Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap

ZSCAN4 2 datasets

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap

Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap