chr4 : 99,219,535 99,219,769
234 bp 85 TFs 1 linked gene
This 234 bp open chromatin element is linked to ADH6 and is bound by 85 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ADH6 289 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:99,214,535 – 99,224,769
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
ARID4A 2 datasets
ChIP Hep-G2 ENCSR386UBO.ARID4A.Hep-G2 121 bp overlap
ChIP HepG2 ENCFF142DIE 65 bp overlap
ASH2L 2 datasets
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 136 bp overlap
ChIP HepG2 ENCFF207QHL 214 bp overlap
BAZ2A 1 dataset
ChIP HepG2 ENCFF797RVO 61 bp overlap
CBX5 1 dataset
ChIP GM12878 ENCSR372GIN.CBX5.GM12878 104 bp overlap
CHD4 1 dataset
ChIP HepG2 ENCFF615GUT 234 bp overlap
CREB1 1 dataset
ChIP HepG2 ENCFF576ERP 179 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 187 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 176 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 222 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 139 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 178 bp overlap
FOXA1 8 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 234 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 154 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 234 bp overlap
ChIP HepG2 ENCFF207NVJ 140 bp overlap
ChIP HepG2 ENCFF740VZW 99 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 234 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 234 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 234 bp overlap
FOXA2 9 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 232 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 234 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 209 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 167 bp overlap
ChIP DE DE-FOXA2-1 234 bp overlap
ChIP DE DE-FOXA2-2 234 bp overlap
ChIP HepG2 ENCFF533COJ 117 bp overlap
ChIP HepG2 ENCFF570ABM 98 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 152 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 234 bp overlap
FOXC2 1 dataset
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
FOXJ3 1 dataset
ChIP Hep-G2 ENCSR413AJG.FOXJ3.Hep-G2 179 bp overlap
FOXK1 2 datasets
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 165 bp overlap
ChIP HepG2 ENCFF635XWY 139 bp overlap
FOXO6 1 dataset
Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 139 bp overlap
Foxj2 1 dataset
Motif DE_60h DE_60h-Foxj2_MA0614.1 8 bp overlap
GATA2 3 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 204 bp overlap
ChIP HepG2 ENCFF905PYM 173 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 116 bp overlap
ChIP DE DE-GATA4-1 234 bp overlap
ChIP DE DE-GATA4-2 234 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 234 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 234 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 103 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 234 bp overlap
ChIP DE DE-GATA6-2 234 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 234 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 234 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 234 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 234 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 234 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 234 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 109 bp overlap
GATAD2A 2 datasets
ChIP HepG2 ENCFF252XNH 111 bp overlap
ChIP HepG2 ENCFF252XNH 234 bp overlap
GTF2F1 1 dataset
ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 129 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HNF1A 2 datasets
ChIP Hep-G2 ENCSR800QIT.HNF1A.Hep-G2 234 bp overlap
ChIP HepG2 ENCFF540TRC 168 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 234 bp overlap
HNF4A 2 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 197 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 123 bp overlap
HOXA3 1 dataset
ChIP HepG2 ENCFF374TCI 66 bp overlap
IRF4 3 datasets
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 174 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 85 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 175 bp overlap
IRF8 1 dataset
ChIP THP-1 GSE123872.IRF8.THP-1 234 bp overlap
ISL2 1 dataset
ChIP Hep-G2 ENCSR492IHH.ISL2.Hep-G2 174 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 234 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 182 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 234 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 234 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 80 bp overlap
JUND 1 dataset
ChIP liver ENCFF007WWT 138 bp overlap
KDM1A 2 datasets
ChIP HepG2 ENCFF240UWG 106 bp overlap
ChIP HepG2 ENCFF240UWG 234 bp overlap
LIN54 1 dataset
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 194 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 210 bp overlap
MEF2A 1 dataset
ChIP Hep-G2 ENCSR291MJH.MEF2A.Hep-G2 145 bp overlap
MEIS1 3 datasets
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_60h DE_60h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_60h DE_60h-MEIS3_MA0775.2 7 bp overlap
MYBL2 2 datasets
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 207 bp overlap
ChIP HepG2 ENCFF176QIX 84 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 134 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 234 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 130 bp overlap
NCOR1 1 dataset
ChIP HepG2 ENCFF685NAH 179 bp overlap
NFIC 2 datasets
ChIP Hep-G2 ENCSR000BQX.NFIC.Hep-G2 133 bp overlap
ChIP HepG2 ENCFF169TKU 178 bp overlap
NONO 1 dataset
ChIP HepG2 ENCFF313ACY 126 bp overlap
NR2F6 1 dataset
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 131 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 149 bp overlap
ChIP HepG2 ENCFF526NOJ 234 bp overlap
PHF21A 1 dataset
ChIP HepG2 ENCFF525EUW 216 bp overlap
PHF8 3 datasets
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 136 bp overlap
ChIP HepG2 ENCFF065NWR 227 bp overlap
ChIP HepG2 ENCFF065NWR 234 bp overlap
POU2F1 3 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 234 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 136 bp overlap
ChIP HepG2 ENCFF422JZU 234 bp overlap
POU2F2 3 datasets
ChIP GM12878 ENCFF207RKY 117 bp overlap
ChIP GM12891 ENCFF166YPP 201 bp overlap
ChIP GM12891 ENCSR000BII.POU2F2.GM12891 119 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 234 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 177 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 220 bp overlap
PRDM10 2 datasets
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 136 bp overlap
ChIP HepG2 ENCFF324FNA 211 bp overlap
PRDM15 1 dataset
ChIP HepG2 ENCFF259LUZ 234 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 183 bp overlap
RCOR2 1 dataset
ChIP HepG2 ENCFF310RFX 101 bp overlap
REST 1 dataset
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 120 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 188 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 166 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 186 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 195 bp overlap
SMARCB1 2 datasets
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 234 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 101 bp overlap
SMARCC1 5 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 183 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 234 bp overlap
ChIP Hep-G2 GSE108514.SMARCC1.Hep-G2 121 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 234 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 234 bp overlap
SPI1 11 datasets
ChIP EM-3 GSE128834.SPI1.EM-3 210 bp overlap
ChIP GM12878 ENCFF134LCP 184 bp overlap
ChIP GM12891 ENCFF563IUT 137 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 209 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 148 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 146 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 167 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 190 bp overlap
ChIP RS4-11_DEX GSE71616.SPI1.RS4-11_DEX 179 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 171 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 167 bp overlap
SPIB 3 datasets
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 175 bp overlap
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 234 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 177 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 234 bp overlap
TEAD4 1 dataset
ChIP HepG2 ENCFF006QNB 234 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
YEATS4 1 dataset
ChIP HepG2 ENCFF340OIC 234 bp overlap
ZFP36L1 1 dataset
ChIP HepG2 ENCFF375BAZ 190 bp overlap
ZFX 2 datasets
ChIP HepG2 ENCFF016NZF 206 bp overlap
ChIP HepG2 ENCFF016NZF 135 bp overlap
ZFY 2 datasets
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 234 bp overlap
ChIP HepG2 ENCFF106ELT 174 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 234 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 163 bp overlap
ZNF324 2 datasets
Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap
Motif DE_72h DE_72h-ZNF324_MA1977.2 14 bp overlap
ZNF503 1 dataset
ChIP HepG2 ENCFF923HZL 234 bp overlap
ZNF667 2 datasets
Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap
Motif DE_72h DE_72h-ZNF667_MA1984.2 11 bp overlap