chr4 : 56,979,552 56,979,914
362 bp 75 TFs 2 linked genes
This 362 bp open chromatin element is linked to POLR2B and NOA1 and is bound by 75 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
POLR2B 1.8 kb Proximal Proximity
NOA1 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:56,974,552 – 56,984,914
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 362 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 327 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 358 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 104 bp overlap
BRD4 2 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 199 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 53 bp overlap
CCDC6 1 dataset
ChIP HepG2 ENCFF751JSA 64 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 157 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 251 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 362 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 242 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 253 bp overlap
GATA1 2 datasets
ChIP erythroblast ENCFF867JAR 362 bp overlap
ChIP erythroblast ENCFF867JAR 307 bp overlap
GATAD1 1 dataset
ChIP HepG2 ENCFF044OVE 330 bp overlap
HDAC1 4 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 226 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_clone14 132 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 362 bp overlap
ChIP NB4 GSE126720.HDAC1.NB4 135 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR075HTM.HDAC2.K-562 219 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 148 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 289 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 153 bp overlap
HNRNPLL 2 datasets
ChIP K-562 GSE120104.HNRNPLL.K-562 333 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 332 bp overlap
HOXA10 1 dataset
ChIP HepG2 ENCFF422LBU 68 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 250 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 111 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 121 bp overlap
KMT2A 13 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 262 bp overlap
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 362 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 303 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 327 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 362 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 244 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 164 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 224 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 292 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 362 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 362 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 149 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 183 bp overlap
MEN1 1 dataset
ChIP RS4-11_DMSO-D3-180110 GSE127507.MEN1.RS4-11_DMSO-D3-180110 115 bp overlap
MLLT1 3 datasets
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 319 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 359 bp overlap
ChIP K562 ENCFF074XRJ 201 bp overlap
MNT 1 dataset
ChIP K-562 ENCSR512NLO.MNT.K-562 188 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 127 bp overlap
MYC 1 dataset
ChIP LNCaP_MYC GSE73994.MYC.LNCaP_MYC 94 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 232 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 248 bp overlap
MYPOP 1 dataset
ChIP HepG2 ENCFF176TQL 113 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 359 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 308 bp overlap
NELFA 2 datasets
ChIP HeLa_1h-Flavo-0-H2O2 GSE93931.NELFA.HeLa_1h-Flavo-0-H2O2 319 bp overlap
ChIP HeLa_Flavo-0-H2O2 GSE100742.NELFA.HeLa_Flavo-0-H2O2 352 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 219 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 141 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF130SGK 344 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 138 bp overlap
ChIP K562 ENCFF286KMN 195 bp overlap
PBX3 2 datasets
ChIP GM12878 ENCFF285BQQ 158 bp overlap
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 110 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 144 bp overlap
PKNOX1 8 datasets
ChIP GM12878 ENCFF589FCY 294 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 344 bp overlap
ChIP HEK293T ENCFF174WDB 136 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 192 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 273 bp overlap
ChIP K562 ENCFF236IUS 205 bp overlap
ChIP MCF-7 ENCFF116OCS 168 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 315 bp overlap
POLR2A 2 datasets
ChIP IMR-90 ENCFF672YWV 362 bp overlap
ChIP K562 ENCFF262YXJ 362 bp overlap
RBBP5 1 dataset
ChIP K-562 ENCSR000AQI.RBBP5.K-562 145 bp overlap
RBFOX2 2 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 302 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 302 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 308 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 240 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 362 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 202 bp overlap
SIN3A 4 datasets
ChIP K-562 ENCSR920BLG.SIN3A.K-562 135 bp overlap
ChIP K562 ENCFF397YHR 224 bp overlap
ChIP SK-N-SH ENCFF931NFD 290 bp overlap
ChIP SK-N-SH ENCFF931NFD 174 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD4.HGrC1_C134W-TGF_parental 92 bp overlap
SMARCA4 5 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 191 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 215 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 140 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 184 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 227 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 160 bp overlap
ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 362 bp overlap
TAF1 2 datasets
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 187 bp overlap
ChIP K562 ENCFF491WAE 277 bp overlap
UBTF 1 dataset
ChIP HepG2 ENCFF424RNN 76 bp overlap
YEATS4 1 dataset
ChIP HepG2 ENCFF340OIC 61 bp overlap
YY1 3 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 271 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 95 bp overlap
ChIP K562 ENCFF660QRE 285 bp overlap
ZBTB6 1 dataset
Motif DE_36h DE_36h-ZBTB6_MA1581.2 9 bp overlap
ZFX 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 162 bp overlap
ZNF135 1 dataset
Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 147 bp overlap
ZNF213 1 dataset
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 242 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 116 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 154 bp overlap
ZNF384 6 datasets
ChIP GM12878 ENCFF229VSP 210 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 149 bp overlap
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 95 bp overlap
ChIP HepG2 ENCFF129PLC 171 bp overlap
ChIP K-562 ENCSR000EFP.ZNF384.K-562 87 bp overlap
ChIP K562 ENCFF365NXQ 169 bp overlap
ZNF441 1 dataset
ChIP HepG2 ENCFF738UDK 349 bp overlap
ZNF460 2 datasets
Motif DE_36h DE_36h-ZNF460_MA1596.1 16 bp overlap
ChIP HepG2 ENCFF007NNM 360 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 362 bp overlap