chr3 : 187,746,753 – 187,746,900
147 bp 73 TFs 4 linked genes
This 147 bp open chromatin element is linked to 4 target genes and is bound by 73 transcription factors.
Linked Genes
4 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
BCL6 1.3 kb Proximal Proximity
ENSG00000289331 1.4 kb Proximal Proximity
ENSG00000290021 1.8 kb Proximal Proximity
ENSG00000285938 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:187,741,753 – 187,751,900
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 87 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 134 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 147 bp overlap
Ahr::Arnt 1 dataset
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
BCL6 4 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 127 bp overlap
ChIP CD4 GSE59933.BCL6.CD4 105 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 135 bp overlap
ChIP OCI-Ly1 GSE107920.BCL6.OCI-Ly1 103 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 124 bp overlap
BRD2 2 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 147 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 106 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 121 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 98 bp overlap
BRD4 16 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 147 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 147 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 147 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 147 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 147 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 135 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 147 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 138 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 82 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 69 bp overlap
ChIP Mutu-1_JQ1 GSE84213.BRD4.Mutu-1_JQ1 147 bp overlap
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 147 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 147 bp overlap
ChIP SUM185_DMSO GSE63581.BRD4.SUM185_DMSO 69 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 147 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 123 bp overlap
CDK8 5 datasets
ChIP leiomyoma_PT1063 GSE128230.CDK8.leiomyoma_PT1063 66 bp overlap
ChIP leiomyoma_PT848 GSE128230.CDK8.leiomyoma_PT848 67 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 93 bp overlap
ChIP leiomyoma_PT916 GSE128230.CDK8.leiomyoma_PT916 103 bp overlap
ChIP myometrium_PT967 GSE128230.CDK8.myometrium_PT967 68 bp overlap
CHD1 1 dataset
ChIP K-562 ENCSR000AQD.CHD1.K-562 103 bp overlap
CHD2 1 dataset
ChIP K-562 ENCSR000EHD.CHD2.K-562 121 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 113 bp overlap
CHD8 1 dataset
ChIP T-47D_R5020_45 GSE62428.CHD8.T-47D_R5020_45 147 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 129 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 89 bp overlap
CTCF 1 dataset
ChIP tibial nerve ENCFF857SLT 62 bp overlap
E2F6 1 dataset
Motif ES_0h ES_0h-E2F6_MA0471.3 8 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 147 bp overlap
ERF::FOXO1 1 dataset
Motif ES_0h ES_0h-ERFFOXO1_MA1936.2 12 bp overlap
ESR1 5 datasets
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 91 bp overlap
ChIP MCF-7_EtOH GSE136673.ESR1.MCF-7_EtOH 123 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 147 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 131 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 104 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 147 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 147 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 147 bp overlap
FOXO1::ELF1 1 dataset
Motif ES_0h ES_0h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 1 dataset
Motif ES_0h ES_0h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 100 bp overlap
HMGXB4 1 dataset
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 110 bp overlap
HNRNPK 4 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 147 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 147 bp overlap
ChIP K-562 GSE120104.HNRNPK.K-562 108 bp overlap
ChIP K-562 ENCSR014RCS.HNRNPK.K-562 104 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 94 bp overlap
KDM5B 2 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 147 bp overlap
ChIP K-562 ENCSR000AQA.KDM5B.K-562 118 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 54 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 84 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 128 bp overlap
MAF 2 datasets
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 139 bp overlap
ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 147 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR163IUV.MAZ.K-562 119 bp overlap
MED1 4 datasets
ChIP G296S GSE85628.MED1.G296S 147 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 147 bp overlap
ChIP Hep-G2 GSE76893.MED1.Hep-G2 86 bp overlap
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 105 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 71 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 114 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR675LRO.MLLT1.K-562 107 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 81 bp overlap
NCOR2 1 dataset
ChIP OCI-Ly1 GSE29282.NCOR2.OCI-Ly1 129 bp overlap
NFE2L2 1 dataset
ChIP A-375_DMSO GSE57431.NFE2L2.A-375_DMSO 125 bp overlap
NFKB1 3 datasets
ChIP CD4 GSE116695.NFKB1.CD4 93 bp overlap
ChIP CD4-pos GSE126505.NFKB1.CD4-pos 89 bp overlap
ChIP CD4-pos_ID206 GSE126505.NFKB1.CD4-pos_ID206 96 bp overlap
NR3C1 3 datasets
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 103 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 141 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 107 bp overlap
NR5A1 1 dataset
ChIP Hep-G2 ENCSR310OZS.NR5A1.Hep-G2 104 bp overlap
PGR 9 datasets
ChIP T-47D GSE31129.PGR.T-47D 147 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 147 bp overlap
ChIP T-47D-A_R5020 GSE80358.PGR.T-47D-A_R5020 147 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 147 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 147 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 147 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 147 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 147 bp overlap
ChIP T-47D_progesterone_siCtrl GSE132649.PGR.T-47D_progesterone_siCtrl 147 bp overlap
PHF8 1 dataset
ChIP K-562 ENCSR000AQH.PHF8.K-562 137 bp overlap
POLR2A 8 datasets
ChIP Raji ENCFF613VGX 147 bp overlap
ChIP SK-N-MC ENCFF088IVG 147 bp overlap
ChIP adrenal gland ENCFF843OBJ 126 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 147 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 147 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 147 bp overlap
ChIP sigmoid colon ENCFF754JQR 147 bp overlap
ChIP thyroid gland ENCFF979LRR 147 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 140 bp overlap
PRDM10 1 dataset
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 122 bp overlap
RAD21 2 datasets
ChIP MDM GSE103477.RAD21.MDM 147 bp overlap
ChIP MDM_IFNb GSE103477.RAD21.MDM_IFNb 147 bp overlap
RARA::RXRA 1 dataset
Motif ES_0h ES_0h-RARARXRA_MA0159.1 17 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 106 bp overlap
RBFOX2 2 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 147 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 147 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 86 bp overlap
SMARCA4 4 datasets
ChIP NSC GSE125033.SMARCA4.NSC 147 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 124 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 147 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 147 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 83 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 147 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 147 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 136 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 122 bp overlap
TAF1 5 datasets
ChIP H1 ENCFF478SZO 147 bp overlap
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 138 bp overlap
ChIP K-562 ENCSR000BKS.TAF1.K-562 147 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 147 bp overlap
ChIP liver ENCSR016BMM.TAF1.liver 147 bp overlap
TBP 4 datasets
ChIP K-562 ENCSR000EHA.TBP.K-562 109 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 118 bp overlap
ChIP hESC GSE122298.TBP.hESC 133 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 112 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 102 bp overlap
TCF7L2 1 dataset
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 139 bp overlap
VEZF1 3 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 147 bp overlap
ChIP K562 ENCFF053XDV 147 bp overlap
ChIP K562 ENCFF053XDV 147 bp overlap
YY1 1 dataset
ChIP liver ENCSR994YLZ.YY1.liver 147 bp overlap
ZFX 1 dataset
ChIP K-562 ENCSR920ASP.ZFX.K-562 101 bp overlap
ZNF143 1 dataset
Motif ES_0h ES_0h-ZNF143_MA0088.2 16 bp overlap
ZNF148 2 datasets
ChIP K-562 GSE121133.ZNF148.K-562 147 bp overlap
ChIP K562 ENCFF352SDL 103 bp overlap
ZNF281 1 dataset
ChIP HepG2 ENCFF585QNU 147 bp overlap
ZNF35 1 dataset
Motif ES_0h ES_0h-ZNF35_MA2333.1 7 bp overlap
ZNF384 1 dataset
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 96 bp overlap
ZNF667 1 dataset
Motif ES_0h ES_0h-ZNF667_MA1984.2 11 bp overlap
ZNF740 5 datasets
ChIP K-562 ENCSR737UST.ZNF740.K-562 147 bp overlap
ChIP K562 ENCFF505NFV 147 bp overlap
ChIP K562 ENCFF505NFV 90 bp overlap
ChIP K562 ENCFF913GVQ 147 bp overlap
ChIP K562 ENCFF913GVQ 52 bp overlap
ZNF76 1 dataset
Motif ES_0h ES_0h-ZNF76_MA1716.2 17 bp overlap
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