chr3 : 179,324,601 – 179,324,723
122 bp 70 TFs 1 linked gene
This 122 bp open chromatin element is linked to ZNF639 and is bound by 70 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF639 1.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:179,319,601 – 179,329,723
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 122 bp overlap
ASH2L 1 dataset
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 122 bp overlap
ATF4 1 dataset
ChIP K562 ENCFF030XBX 122 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 122 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 96 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 122 bp overlap
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 121 bp overlap
BRD2 2 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 122 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 101 bp overlap
BRD3 2 datasets
ChIP MV4-11_IBET151_500nM GSE120715.BRD3.MV4-11_IBET151_500nM 69 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 88 bp overlap
BRD4 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 82 bp overlap
CHD1 1 dataset
ChIP MCF-7 ENCSR360JOC.CHD1.MCF-7 122 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 122 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 117 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 64 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 85 bp overlap
EP400 2 datasets
ChIP K-562 ENCSR817QKV.EP400.K-562 61 bp overlap
ChIP K562 ENCFF850OZQ 122 bp overlap
ESR1 5 datasets
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 122 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 122 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 74 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 71 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_3 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_3 100 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 122 bp overlap
ETV1 1 dataset
ChIP K562 ENCFF389WTI 122 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 96 bp overlap
FOXA1 2 datasets
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 115 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 122 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 63 bp overlap
GLYR1 1 dataset
ChIP HeLa GSE20303.GLYR1.HeLa 122 bp overlap
GMEB1 1 dataset
ChIP K562 ENCFF705LHX 122 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 102 bp overlap
ChIP K562 ENCFF928TKZ 122 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 122 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 122 bp overlap
HMBOX1 2 datasets
ChIP K562 ENCFF055GAZ 122 bp overlap
ChIP K562 ENCFF317JJX 122 bp overlap
HOXB13 2 datasets
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 122 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 122 bp overlap
ID3 2 datasets
ChIP K-562 ENCSR005NMT.ID3.K-562 122 bp overlap
ChIP K562 ENCFF170RNI 122 bp overlap
KDM5B 1 dataset
ChIP K562 ENCFF049WWX 122 bp overlap
KMT2A 9 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 122 bp overlap
ChIP HEK293T_C-term GSE90762.KMT2A.HEK293T_C-term 122 bp overlap
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 122 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 103 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 122 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 122 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 122 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 76 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 122 bp overlap
MAX 3 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 51 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 106 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 90 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 72 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 122 bp overlap
MNT 4 datasets
ChIP K-562 ENCSR512NLO.MNT.K-562 122 bp overlap
ChIP K-562 ENCSR390VGH.MNT.K-562 86 bp overlap
ChIP K562 ENCFF820IGH 122 bp overlap
ChIP K562 ENCFF820IGH 122 bp overlap
MXI1 1 dataset
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 113 bp overlap
MYC 2 datasets
ChIP MIA-PaCa-2_DMEM GSE143804.MYC.MIA-PaCa-2_DMEM 122 bp overlap
ChIP P493-6 GSE77061.MYC.P493-6 78 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 51 bp overlap
NFYB 1 dataset
ChIP GM12878 ENCFF474DNH 96 bp overlap
NKRF 1 dataset
ChIP GM12878 ENCFF392NLB 122 bp overlap
NR3C1 1 dataset
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 62 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 122 bp overlap
POLR2A 2 datasets
ChIP prostate gland ENCFF881OMH 122 bp overlap
ChIP thyroid gland ENCFF979LRR 122 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 122 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 103 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 122 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 122 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 122 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 122 bp overlap
SAP30 1 dataset
ChIP K562 ENCFF652WJB 100 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 122 bp overlap
SMAD1 1 dataset
ChIP GM12878 ENCSR813DCK.SMAD1.GM12878 122 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 122 bp overlap
SMARCA4 8 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 86 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 122 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 122 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 81 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 121 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 88 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 122 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 122 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 122 bp overlap
SPI1 13 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 87 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 113 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 122 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 122 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 101 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 102 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 110 bp overlap
ChIP K-562_SAHA GSE74999.SPI1.K-562_SAHA 68 bp overlap
ChIP K562 ENCFF410ORC 122 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 115 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 122 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 66 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 122 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 122 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 104 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 122 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 101 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 69 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 91 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 122 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 122 bp overlap
ZNF207 2 datasets
ChIP GM12878 ENCFF153KBD 122 bp overlap
ChIP GM12878 ENCSR117KWH.ZNF207.GM12878 122 bp overlap
ZNF24 2 datasets
ChIP K-562 ENCSR099NCH.ZNF24.K-562 99 bp overlap
ChIP K-562 ENCSR117WTM.ZNF24.K-562 122 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 122 bp overlap
ZNF26 1 dataset
ChIP HEK293T GSE78099.ZNF26.HEK293T 122 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 122 bp overlap
ZNF362 1 dataset
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 122 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 98 bp overlap
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