chr3 : 73,323,631 73,324,704
1,073 bp 93 TFs 0 linked genes
This 1.1 kb open chromatin element has no linked target genes and is bound by 93 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:73,318,631 – 73,329,704
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 152 bp overlap
ChIP prostate GSE56288.AR.prostate 89 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 50 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 165 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 252 bp overlap
BRD4 4 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 561 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 399 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 346 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 397 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 173 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 403 bp overlap
CTCF 2 datasets
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 169 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 253 bp overlap
E4F1 2 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 276 bp overlap
ChIP K562 ENCFF622HMZ 237 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 283 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 275 bp overlap
EP300 1 dataset
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 89 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 247 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 240 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 333 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 156 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 300 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 327 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 394 bp overlap
GATA2 5 datasets
ChIP ESF GSE108408.GATA2.ESF 67 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 206 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 296 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 84 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 279 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-2 443 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 266 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 245 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 392 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 403 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 502 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 288 bp overlap
ChIP DE DE-GATA6-2 532 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 406 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 380 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 426 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 254 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 309 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1073 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 974 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 890 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 333 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 369 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 199 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 343 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 384 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 415 bp overlap
HOXB13 1 dataset
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 153 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 205 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 184 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 253 bp overlap
KLF5 1 dataset
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 274 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 228 bp overlap
MAFF 1 dataset
ChIP HepG2 ENCFF452YUT 177 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 225 bp overlap
ChIP K562 ENCFF455EEO 272 bp overlap
MAFK 4 datasets
ChIP A549 ENCFF371EPR 52 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 111 bp overlap
ChIP HepG2 ENCFF743ZOF 174 bp overlap
ChIP HepG2 ENCFF767LDG 171 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCFF994GSG 150 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 283 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 147 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 253 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 340 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 352 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 286 bp overlap
MYOG 2 datasets
ChIP RH4 GSE83726.MYOG.RH4 314 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 283 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 283 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 318 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_alpha-amanitin-30min GSE118494.NCAPH2.IMR-90_alpha-amanitin-30min 196 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 260 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 91 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 288 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 199 bp overlap
OVOL3 2 datasets
ChIP HEK293 ENCFF898STB 199 bp overlap
ChIP HEK293 ENCSR768LIO.OVOL3.HEK293 218 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 373 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 304 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 371 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 161 bp overlap
POLR2A 3 datasets
ChIP transverse colon ENCFF607LKE 64 bp overlap
ChIP transverse colon ENCFF610RWV 60 bp overlap
ChIP vagina ENCFF384GAB 218 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 339 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 175 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 213 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 221 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 164 bp overlap
RAD21 2 datasets
ChIP IMR-5 GSE78957.RAD21.IMR-5 201 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 240 bp overlap
RUNX1 1 dataset
ChIP MV4-11 GSE79899.RUNX1.MV4-11 113 bp overlap
SETDB1 4 datasets
ChIP HEK293 ENCFF676PLV 440 bp overlap
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 395 bp overlap
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 374 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 395 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 369 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 221 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 287 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 685 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 1019 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 700 bp overlap
SMARCA4 2 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 314 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 89 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 125 bp overlap
TAL1 3 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 235 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 192 bp overlap
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 154 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 403 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 177 bp overlap
TP63 1 dataset
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 172 bp overlap
TRIM28 5 datasets
ChIP HEK293 ENCFF265CEM 387 bp overlap
ChIP HEK293 ENCFF582MWI 383 bp overlap
ChIP HEK293 ENCFF582MWI 181 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 281 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 115 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 201 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 236 bp overlap
YY1 3 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 297 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 423 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 374 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 90 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 343 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 79 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 193 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 150 bp overlap
ZNF304 1 dataset
ChIP HEK293T GSE78099.ZNF304.HEK293T 114 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 259 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 170 bp overlap
ZNF341 1 dataset
ChIP HEK293 GSE76494.ZNF341.HEK293 111 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 106 bp overlap
ZNF501 3 datasets
ChIP HEK293 ENCFF066RAQ 359 bp overlap
ChIP HEK293 ENCFF066RAQ 159 bp overlap
ChIP HEK293 ENCSR461ZJT.ZNF501.HEK293 140 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 120 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 397 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 392 bp overlap
ZNF677 2 datasets
ChIP HEK293 ENCFF220HCQ 277 bp overlap
ChIP HEK293 ENCSR279KDC.ZNF677.HEK293 251 bp overlap
ZNF707 3 datasets
ChIP HEK293 ENCFF249FMX 272 bp overlap
ChIP HEK293 ENCSR854IPI.ZNF707.HEK293 295 bp overlap
ChIP HEK293T GSE78099.ZNF707.HEK293T 246 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 307 bp overlap