chr2 : 236,572,314 – 236,572,861
547 bp 94 TFs 1 linked gene
This 547 bp open chromatin element is linked to ACKR3 and is bound by 94 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ACKR3 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:236,567,314 – 236,577,861
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast_tumor_Male_20 GSE104399.AR.breast_tumor_Male_20 236 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 547 bp overlap
ARNT::HIF1A 1 dataset
Motif DE_72h DE_72h-ARNTHIF1A_MA0259.2 5 bp overlap
ATF6 1 dataset
Motif DE_72h DE_72h-ATF6_MA1466.2 13 bp overlap
BRD4 4 datasets
ChIP HUVEC-C GSE53998.BRD4.HUVEC-C 133 bp overlap
ChIP HeLa GSE151038.BRD4.HeLa 301 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 538 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 136 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 229 bp overlap
ChIP K562 ENCFF673OEZ 290 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 145 bp overlap
CHD1 1 dataset
ChIP MCF-7 ENCSR360JOC.CHD1.MCF-7 323 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 287 bp overlap
CREB1 5 datasets
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 144 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 267 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 334 bp overlap
ChIP MCF-7 ENCFF341ZEM 369 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 232 bp overlap
CREB3 1 dataset
Motif DE_72h DE_72h-CREB3_MA0638.2 12 bp overlap
CREB3L1 1 dataset
Motif DE_72h DE_72h-CREB3L1_MA0839.2 13 bp overlap
CREB3L4 1 dataset
Motif DE_72h DE_72h-CREB3L4_MA1474.2 10 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 289 bp overlap
DMRTA2 2 datasets
Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_72h DE_72h-DMRTA2_MA1478.2 6 bp overlap
E2F6 2 datasets
Motif DE_60h DE_60h-E2F6_MA0471.3 8 bp overlap
Motif DE_72h DE_72h-E2F6_MA0471.3 8 bp overlap
ESR1 21 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 277 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 203 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 314 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 364 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 234 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 173 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 254 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 405 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 415 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 382 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 421 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 357 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 257 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 463 bp overlap
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 358 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 445 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 440 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 323 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 167 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 249 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 240 bp overlap
ESR2 2 datasets
Motif DE_60h DE_60h-ESR2_MA0258.2 15 bp overlap
Motif DE_72h DE_72h-ESR2_MA0258.2 15 bp overlap
EZH2 2 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 412 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 235 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 465 bp overlap
ChIP DE DE-FOXA2-2 487 bp overlap
GATA1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 146 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 429 bp overlap
ChIP DE DE-GATA4-2 471 bp overlap
ChIP foregut GSE117136.GATA4.foregut 188 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 203 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 255 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 295 bp overlap
ChIP DE DE-GATA6-2 547 bp overlap
ChIP foregut GSE117136.GATA6.foregut 333 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 233 bp overlap
Gli1 2 datasets
Motif DE_60h DE_60h-Gli1_MA1990.2 10 bp overlap
Motif DE_72h DE_72h-Gli1_MA1990.2 10 bp overlap
Gli2 2 datasets
Motif DE_60h DE_60h-Gli2_MA0734.4 9 bp overlap
Motif DE_72h DE_72h-Gli2_MA0734.4 9 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 528 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 264 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 276 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 291 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 307 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 164 bp overlap
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 153 bp overlap
Hand1::Tcf3 1 dataset
Motif DE_72h DE_72h-Hand1Tcf3_MA0092.2 9 bp overlap
JUN 1 dataset
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 130 bp overlap
KLF10 1 dataset
Motif DE_72h DE_72h-KLF10_MA1511.2 9 bp overlap
KLF12 1 dataset
Motif DE_72h DE_72h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_72h DE_72h-KLF14_MA0740.2 9 bp overlap
MAX 1 dataset
ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 78 bp overlap
MED1 3 datasets
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 366 bp overlap
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 191 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 84 bp overlap
MLLT1 1 dataset
ChIP MCF-7 ENCSR427BBI.MLLT1.MCF-7 88 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 313 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 142 bp overlap
NR2C1 2 datasets
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 406 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 453 bp overlap
Nr1H2 2 datasets
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap
PATZ1 1 dataset
Motif DE_72h DE_72h-PATZ1_MA1961.2 11 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 168 bp overlap
PML 1 dataset
ChIP MCF-7 ENCSR000BUZ.PML.MCF-7 170 bp overlap
POLR2A 23 datasets
ChIP MCF-7 ENCFF164XWP 365 bp overlap
ChIP MCF-7 ENCFF164XWP 292 bp overlap
ChIP body of pancreas ENCFF501FEC 427 bp overlap
ChIP body of pancreas ENCFF675RCN 403 bp overlap
ChIP body of pancreas ENCFF727UBE 221 bp overlap
ChIP endothelial cell of umbilical vein ENCFF091YHT 233 bp overlap
ChIP endothelial cell of umbilical vein ENCFF091YHT 405 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 192 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 442 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 402 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 341 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 459 bp overlap
ChIP gastroesophageal sphincter ENCFF826EZZ 417 bp overlap
ChIP gastroesophageal sphincter ENCFF826EZZ 293 bp overlap
ChIP sigmoid colon ENCFF725QFT 219 bp overlap
ChIP sigmoid colon ENCFF748YVT 212 bp overlap
ChIP suprapubic skin ENCFF832BBO 326 bp overlap
ChIP suprapubic skin ENCFF832BBO 365 bp overlap
ChIP thyroid gland ENCFF979LRR 390 bp overlap
ChIP tibial nerve ENCFF983HAU 360 bp overlap
ChIP transverse colon ENCFF193UMS 547 bp overlap
ChIP transverse colon ENCFF607LKE 371 bp overlap
ChIP transverse colon ENCFF840PXT 321 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 429 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 199 bp overlap
RBPJ 4 datasets
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
RELA 8 datasets
Motif DE_72h DE_72h-RELA_MA0107.1 10 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 250 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 275 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 227 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 203 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 79 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 165 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 364 bp overlap
RPA2_phospho 2 datasets
ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 249 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 459 bp overlap
SIN3A 2 datasets
ChIP MCF-7 ENCFF521RDC 477 bp overlap
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 254 bp overlap
SIX1 2 datasets
Motif DE_60h DE_60h-SIX1_MA1118.2 9 bp overlap
Motif DE_72h DE_72h-SIX1_MA1118.2 9 bp overlap
SIX2 5 datasets
Motif DE_60h DE_60h-SIX2_MA1119.2 11 bp overlap
Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap
ChIP HEK GSE73865.SIX2.HEK 219 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 183 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 232 bp overlap
SMAD2 2 datasets
Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap
Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 505 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 150 bp overlap
SMARCA4 3 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 504 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 363 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 286 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 289 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 399 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX13 1 dataset
Motif DE_72h DE_72h-SOX13_MA1120.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 253 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 443 bp overlap
SOX2 2 datasets
Motif DE_72h DE_72h-SOX2_MA0143.5 7 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 168 bp overlap
SP2 1 dataset
Motif DE_72h DE_72h-SP2_MA0516.3 9 bp overlap
SP4 1 dataset
Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 205 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 547 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 547 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 290 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 253 bp overlap
Sox17 1 dataset
Motif DE_72h DE_72h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif DE_72h DE_72h-Sox3_MA0514.3 7 bp overlap
Stat5b 1 dataset
Motif DE_72h DE_72h-Stat5b_MA1625.2 9 bp overlap
TAL1 5 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 218 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 237 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 142 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 215 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 149 bp overlap
TCF12 1 dataset
ChIP K-562 ENCSR744WOO.TCF12.K-562 194 bp overlap
TFAP2A 1 dataset
Motif DE_72h DE_72h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif DE_72h DE_72h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 1 dataset
Motif DE_72h DE_72h-TFAP2C_MA0524.3 11 bp overlap
THRA 1 dataset
Motif DE_72h DE_72h-THRA_MA1969.2 18 bp overlap
Tbx6 2 datasets
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
Motif DE_72h DE_72h-Tbx6_MA1567.3 9 bp overlap
UBN1 1 dataset
ChIP HeLa GSE45024.UBN1.HeLa 294 bp overlap
ZBTB40 1 dataset
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 231 bp overlap
ZIC1 2 datasets
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
Motif DE_72h DE_72h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
Motif DE_72h DE_72h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
Motif DE_72h DE_72h-ZIC5_MA1584.2 15 bp overlap
ZNF282 1 dataset
Motif DE_72h DE_72h-ZNF282_MA1154.2 15 bp overlap
ZNF687 1 dataset
ChIP MCF-7 ENCSR899BKM.ZNF687.MCF-7 228 bp overlap
ZNF75D 1 dataset
Motif DE_72h DE_72h-ZNF75D_MA1601.2 12 bp overlap
ZSCAN16 2 datasets
Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap
Motif DE_72h DE_72h-ZSCAN16_MA2100.1 18 bp overlap
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