chr2 : 230,230,146 230,230,344
198 bp 79 TFs 1 linked gene
This 198 bp open chromatin element is linked to SP140 and is bound by 79 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SP140 65 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:230,225,146 – 230,235,344
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
AR 1 dataset
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 167 bp overlap
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 141 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 142 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 137 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 198 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 189 bp overlap
BACH2 1 dataset
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 198 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 148 bp overlap
BICRA 1 dataset
ChIP Mel270 GSE124720.BICRA.Mel270 162 bp overlap
BRD2 9 datasets
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 63 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 198 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 198 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 198 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 198 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 198 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 198 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 198 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 198 bp overlap
BRD4 19 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 198 bp overlap
ChIP CLL_patient1_4h_CpG_BET GSE109411.BRD4.CLL_patient1_4h_CpG_BET 198 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 182 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 198 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 119 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 198 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 198 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 139 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 198 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 198 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 198 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 198 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 198 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 198 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 198 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 145 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 198 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 181 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 198 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD9.MDA-MB-231_DMSO 198 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 198 bp overlap
CREBBP 1 dataset
ChIP fibroblast_senescent GSE106146.CREBBP.fibroblast_senescent 157 bp overlap
CTCF 5 datasets
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 113 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 198 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 191 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 116 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 136 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF335XTP 142 bp overlap
ChIP BLaER1 ENCFF460KDD 158 bp overlap
ChIP BLaER1 ENCFF896HSY 198 bp overlap
E2F1 2 datasets
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 196 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 80 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 198 bp overlap
ELF3 2 datasets
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 198 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 198 bp overlap
EP300 2 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 134 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 177 bp overlap
ERG 4 datasets
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 198 bp overlap
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 166 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 198 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 75 bp overlap
ESR1 1 dataset
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 175 bp overlap
ETS1 3 datasets
ChIP 786-O GSE86092.ETS1.786-O 198 bp overlap
ChIP GM23338 ENCFF701IZH 198 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 140 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 198 bp overlap
FLI1 5 datasets
ChIP A-673_D10 GSE129155.FLI1.A-673_D10 111 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 198 bp overlap
ChIP A-673_D9 GSE129155.FLI1.A-673_D9 169 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 118 bp overlap
ChIP NB4 GSE23730.FLI1.NB4 150 bp overlap
FOS 3 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 137 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 198 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 198 bp overlap
FOSL1 2 datasets
ChIP 143B GSE74230.FOSL1.143B 198 bp overlap
ChIP MDA-MB-231 GSE95303.FOSL1.MDA-MB-231 149 bp overlap
FOSL2 7 datasets
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 135 bp overlap
ChIP HepG2 ENCFF548CXY 198 bp overlap
ChIP HepG2 ENCFF796NIA 198 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 194 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 148 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 198 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 132 bp overlap
FOXA1 2 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 174 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 198 bp overlap
FOXA2 1 dataset
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 198 bp overlap
FOXL2 1 dataset
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 181 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 187 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF824TGK 198 bp overlap
INTS13 2 datasets
ChIP HL-60 GSE106359.INTS13.HL-60 86 bp overlap
ChIP HL-60_PMA GSE106359.INTS13.HL-60_PMA 133 bp overlap
IRF4 2 datasets
ChIP B-cell GSE142493.IRF4.B-cell 198 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 198 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 142 bp overlap
JUN 10 datasets
ChIP 786-O GSE86092.JUN.786-O 183 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 198 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 198 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 198 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 192 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 198 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 136 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 198 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 198 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 198 bp overlap
JUNB 2 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 198 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 198 bp overlap
JUND 4 datasets
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 103 bp overlap
ChIP SK-N-SH ENCFF551NEQ 198 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 151 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 127 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 198 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 181 bp overlap
MAFK 3 datasets
ChIP H1 ENCFF854XWE 198 bp overlap
ChIP IMR-90 ENCFF336DHZ 198 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 190 bp overlap
MED1 1 dataset
ChIP MDA-MB-231_LQ GSE95121.MED1.MDA-MB-231_LQ 198 bp overlap
MITF 4 datasets
ChIP 501-mel GSE137522.MITF.501-mel 194 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 157 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 99 bp overlap
ChIP K562 ENCFF731XJJ 113 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 198 bp overlap
MYCN 1 dataset
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 137 bp overlap
NANOG 2 datasets
ChIP WA09 GSE105028.NANOG.WA09 193 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 198 bp overlap
NFE2 2 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 113 bp overlap
ChIP ProEs GSE59087.NFE2.ProEs 98 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 198 bp overlap
NFE2L2 6 datasets
ChIP BEAS-2B GSE145834.NFE2L2.BEAS-2B 198 bp overlap
ChIP BEAS-2B_arsenic GSE145834.NFE2L2.BEAS-2B_arsenic 198 bp overlap
ChIP Hep-G2 ENCSR488EES.NFE2L2.Hep-G2 138 bp overlap
ChIP HepG2 ENCFF178DRC 198 bp overlap
ChIP IMR-90 ENCFF059WEE 198 bp overlap
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 161 bp overlap
NR3C1 8 datasets
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 198 bp overlap
ChIP BEAS-2B_DEX_IA1 GSE125623.NR3C1.BEAS-2B_DEX_IA1 198 bp overlap
ChIP BEAS-2B_TNF-DEX_IA1 GSE125623.NR3C1.BEAS-2B_TNF-DEX_IA1 114 bp overlap
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 198 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 198 bp overlap
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 198 bp overlap
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 81 bp overlap
ChIP MDA-MB-231 GSE152203.NR3C1.MDA-MB-231 198 bp overlap
RAD21 2 datasets
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 155 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 198 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 69 bp overlap
RELA 2 datasets
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 194 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 180 bp overlap
RNF2 1 dataset
ChIP HMELBRAF_OVER GSE51929.RNF2.HMELBRAF_OVER 136 bp overlap
RUNX1 4 datasets
ChIP MCF-10A GSE129314.RUNX1.MCF-10A 86 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 198 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 163 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 198 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 198 bp overlap
RXRA 2 datasets
ChIP JMSU-1 GSE107734.RXRA.JMSU-1 175 bp overlap
ChIP JMSU-1_RXRA-S427F GSE107734.RXRA.JMSU-1_RXRA-S427F 184 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 101 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 157 bp overlap
SMAD3 3 datasets
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 197 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 198 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 171 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 151 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 72 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 162 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 160 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 198 bp overlap
SPI1 7 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 178 bp overlap
ChIP GM12891 ENCFF563IUT 198 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 170 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 108 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 164 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 126 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 77 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 198 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 198 bp overlap
STAT1 1 dataset
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 198 bp overlap
STAT3 2 datasets
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 170 bp overlap
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 192 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 198 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 159 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 160 bp overlap
TEAD4 1 dataset
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 198 bp overlap
TFE3 2 datasets
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 136 bp overlap
ChIP K562 ENCFF697ABG 67 bp overlap
TFEB 1 dataset
ChIP HUVEC-C GSE88894.TFEB.HUVEC-C 183 bp overlap
TOE1 1 dataset
ChIP HepG2 ENCFF776YJH 52 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 198 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 145 bp overlap
USF2 3 datasets
ChIP GM12878 GSE97661.USF2.GM12878 84 bp overlap
ChIP IMR-90 ENCFF438KUN 53 bp overlap
ChIP WTC11 ENCFF139JAW 198 bp overlap
ZMYND8 1 dataset
ChIP MDA-MB-231 GSE108833.ZMYND8.MDA-MB-231 192 bp overlap
ZNF441 1 dataset
ChIP HepG2 ENCFF738UDK 198 bp overlap