chr2 : 224,210,628 224,211,437
809 bp 108 TFs 0 linked genes
This 809 bp open chromatin element has no linked target genes and is bound by 108 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:224,205,628 – 224,216,437
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
AR 26 datasets
ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 58 bp overlap
ChIP LNCaP GSE85558.AR.LNCaP 78 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 141 bp overlap
ChIP LNCaP_Bag-1L_WT_DHT GSE89938.AR.LNCaP_Bag-1L_WT_DHT 56 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 121 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 96 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 149 bp overlap
ChIP VCaP GSE83650.AR.VCaP 104 bp overlap
ChIP VCaP GSE98809.AR.VCaP 104 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 119 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 197 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 237 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 451 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 664 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 240 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 78 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 118 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 113 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 143 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 116 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 121 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 157 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 179 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 177 bp overlap
ChIP prostate-cancer_1609 GSE118845.AR.prostate-cancer_1609 120 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 108 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 650 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 170 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 98 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 425 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 221 bp overlap
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 546 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 124 bp overlap
CDK9 7 datasets
ChIP A-375 GSE128080.CDK9.A-375 269 bp overlap
ChIP A-375_1726 GSE128080.CDK9.A-375_1726 340 bp overlap
ChIP A-375_1726plus GSE128080.CDK9.A-375_1726plus 154 bp overlap
ChIP A-375_A771726 GSE68052.CDK9.A-375_A771726 215 bp overlap
ChIP A-375_A771726 GSE68052.CDK9.A-375_A771726 131 bp overlap
ChIP A-375_DMSO GSE57431.CDK9.A-375_DMSO 231 bp overlap
ChIP A-375_DMSO GSE68052.CDK9.A-375_DMSO 193 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 124 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 307 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 153 bp overlap
CTCF 2 datasets
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 225 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 196 bp overlap
DUX4 1 dataset
Motif DE_24h DE_24h-DUX4_MA0468.1 11 bp overlap
Dux 1 dataset
Motif DE_24h DE_24h-Dux_MA0611.3 11 bp overlap
EBF3 1 dataset
Motif DE_24h DE_24h-EBF3_MA1637.2 9 bp overlap
ELF1 1 dataset
Motif DE_24h DE_24h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_24h DE_24h-ELF3_MA0640.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 199 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 179 bp overlap
ERG 6 datasets
ChIP VCaP GSE83650.ERG.VCaP 315 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 315 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 144 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 458 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 158 bp overlap
ChIP aortic-endothelial-cell_D47 GSE139377.ERG.aortic-endothelial-cell_D47 183 bp overlap
ETV1 1 dataset
ChIP A-375 GSE80443.ETV1.A-375 221 bp overlap
ETV3 1 dataset
Motif DE_24h DE_24h-ETV3_MA0763.2 9 bp overlap
Ebf2 1 dataset
Motif DE_24h DE_24h-Ebf2_MA1604.2 9 bp overlap
Erg 1 dataset
Motif DE_24h DE_24h-Erg_MA0474.4 10 bp overlap
FIGLA 1 dataset
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
FLI1 6 datasets
ChIP A-673 GSE99959.FLI1.A-673 201 bp overlap
ChIP A-673 GSE99959.FLI1.A-673 304 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 432 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 244 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 538 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 298 bp overlap
FOSL2 1 dataset
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 157 bp overlap
FOXA1 1 dataset
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 161 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 226 bp overlap
GABPA 2 datasets
Motif DE_24h DE_24h-GABPA_MA0062.4 10 bp overlap
ChIP K-562 ENCSR290MUH.GABPA.K-562 133 bp overlap
GATA2 7 datasets
Motif DE_24h DE_24h-GATA2_MA0036.4 7 bp overlap
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
ChIP SH-SY5Y ENCFF485YIB 319 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 340 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 157 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 91 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 223 bp overlap
GATA3 5 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 393 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 416 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 414 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 278 bp overlap
ChIP SK-N-SH ENCFF040SSB 365 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 203 bp overlap
ChIP DE DE-GATA4-1 325 bp overlap
ChIP DE DE-GATA4-2 275 bp overlap
Motif DE_24h DE_24h-GATA4_MA0482.3 8 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
GATA5 2 datasets
Motif DE_24h DE_24h-GATA5_MA0766.3 8 bp overlap
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 265 bp overlap
ChIP DE DE-GATA6-2 278 bp overlap
Motif DE_24h DE_24h-GATA6_MA1104.3 8 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 629 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 735 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 747 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 556 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 739 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 731 bp overlap
Gata3 2 datasets
Motif DE_24h DE_24h-Gata3_MA0037.5 8 bp overlap
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 462 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 433 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 430 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 232 bp overlap
HOXB13 6 datasets
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 115 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 89 bp overlap
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 72 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 99 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 50 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 73 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 72 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 163 bp overlap
IKZF2 2 datasets
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
IRF3 1 dataset
Motif DE_24h DE_24h-IRF3_MA1418.2 17 bp overlap
IRF7 1 dataset
Motif DE_24h DE_24h-IRF7_MA0772.2 13 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 448 bp overlap
ChIP SK-N-SH ENCFF285GEQ 485 bp overlap
Ikzf3 1 dataset
Motif DE_24h DE_24h-Ikzf3_MA1992.2 9 bp overlap
Irf1 1 dataset
Motif DE_24h DE_24h-Irf1_MA0050.4 11 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 670 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 501 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 789 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 641 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 370 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 775 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 125 bp overlap
KLF17 1 dataset
Motif DE_24h DE_24h-KLF17_MA1514.2 14 bp overlap
KLF4 1 dataset
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
MAFF 2 datasets
Motif DE_24h DE_24h-MAFF_MA0495.4 11 bp overlap
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
MAML3 1 dataset
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 239 bp overlap
MEIS1 5 datasets
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_24h DE_24h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_24h DE_24h-MEIS3_MA0775.2 7 bp overlap
MSANTD3 3 datasets
Motif DE_24h DE_24h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_24h DE_24h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_36h DE_36h-MSANTD3_MA1523.2 7 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 498 bp overlap
MYCN 4 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 319 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 434 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 127 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 164 bp overlap
MYF6 1 dataset
Motif DE_24h DE_24h-MYF6_MA0667.1 10 bp overlap
Mafb 2 datasets
Motif DE_24h DE_24h-Mafb_MA0117.3 11 bp overlap
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
Msgn1 1 dataset
Motif DE_24h DE_24h-Msgn1_MA1524.3 10 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 348 bp overlap
NEUROG2 1 dataset
Motif DE_24h DE_24h-NEUROG2_MA0669.1 10 bp overlap
NFATC3 2 datasets
Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
NRL 2 datasets
Motif DE_24h DE_24h-NRL_MA0842.3 12 bp overlap
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
Nfatc1 2 datasets
Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
PBX3 3 datasets
Motif DE_24h DE_24h-PBX3_MA1114.2 11 bp overlap
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
ChIP SK-N-SH ENCFF876BMC 317 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 511 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 254 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 354 bp overlap
PKNOX1 2 datasets
Motif DE_24h DE_24h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
PLAG1 1 dataset
Motif DE_24h DE_24h-PLAG1_MA0163.1 14 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 135 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 747 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 459 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 388 bp overlap
RELB 1 dataset
ChIP L1236 GSE63736.RELB.L1236 79 bp overlap
RREB1 1 dataset
Motif DE_24h DE_24h-RREB1_MA0073.2 19 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 215 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 184 bp overlap
Rhox11 1 dataset
Motif DE_24h DE_24h-Rhox11_MA0629.2 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 539 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 631 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 680 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 684 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 529 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 456 bp overlap
SMARCA4 3 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 191 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 218 bp overlap
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 167 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 261 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 504 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 173 bp overlap
SP5 1 dataset
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Stat2 1 dataset
Motif DE_24h DE_24h-Stat2_MA1623.2 10 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 468 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 239 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 439 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 439 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 345 bp overlap
TRPS1 2 datasets
Motif DE_24h DE_24h-TRPS1_MA1970.2 8 bp overlap
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 191 bp overlap
Vdr 1 dataset
Motif DE_24h DE_24h-Vdr_MA0693.4 7 bp overlap
Wt1 1 dataset
Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap
ZBTB7A 1 dataset
Motif DE_24h DE_24h-ZBTB7A_MA0750.3 9 bp overlap
ZBTB7C 1 dataset
Motif DE_24h DE_24h-ZBTB7C_MA0695.2 8 bp overlap
ZEB1 1 dataset
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ZFP14 1 dataset
Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap
ZNF16 1 dataset
Motif DE_24h DE_24h-ZNF16_MA1654.2 21 bp overlap
ZNF175 1 dataset
Motif DE_24h DE_24h-ZNF175_MA2332.1 9 bp overlap
ZNF184 3 datasets
Motif DE_24h DE_24h-ZNF184_MA2120.1 13 bp overlap
Motif DE_24h DE_24h-ZNF184_MA2120.1 13 bp overlap
Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap
ZNF675 1 dataset
Motif DE_24h DE_24h-ZNF675_MA1714.2 19 bp overlap
ZNF684 1 dataset
Motif DE_24h DE_24h-ZNF684_MA1600.2 14 bp overlap
ZSCAN4 2 datasets
Motif DE_24h DE_24h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap