chr2 : 198,697,092 198,697,807
715 bp 93 TFs 0 linked genes
This 715 bp open chromatin element has no linked target genes and is bound by 93 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:198,692,092 – 198,702,807
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_M253K_shFOXA1_Ethanol GSE128883.AR.LNCaP_M253K_shFOXA1_Ethanol 200 bp overlap
BCL6B 1 dataset
ChIP HEK293 ENCFF555YRB 365 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 217 bp overlap
BRD4 1 dataset
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 196 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 357 bp overlap
CDX2 4 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 273 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 538 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 600 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 203 bp overlap
CEBPA 4 datasets
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 181 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 133 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 159 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 268 bp overlap
CREB3L1 1 dataset
Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 81 bp overlap
CTNNB1 1 dataset
ChIP LS180_125 GSE31939.CTNNB1.LS180_125 135 bp overlap
DAXX 1 dataset
ChIP PC-3_DAXX GSE68647.DAXX.PC-3_DAXX 452 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
EOMES 2 datasets
Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 200 bp overlap
EZH2 1 dataset
ChIP hepatocyte ENCFF118DKH 357 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 115 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 306 bp overlap
FOXA1 5 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 463 bp overlap
ChIP Huh-7_ASYNC GSE39241.FOXA1.Huh-7_ASYNC 159 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 224 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 448 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 288 bp overlap
FOXA2 10 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 279 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 275 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 311 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 438 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 398 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 300 bp overlap
ChIP DE DE-FOXA2-1 515 bp overlap
ChIP DE DE-FOXA2-2 523 bp overlap
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 242 bp overlap
FOXA3 1 dataset
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
FOXF2 1 dataset
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
FOXI1 1 dataset
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
FOXM1 1 dataset
ChIP HEK293 GSE60032.FOXM1.HEK293 246 bp overlap
FOXP1 1 dataset
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
FOXP4 1 dataset
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 315 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 294 bp overlap
ChIP DE DE-GATA4-1 497 bp overlap
ChIP DE DE-GATA4-2 530 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 567 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 656 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 438 bp overlap
GATA5 1 dataset
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
GATA6 15 datasets
ChIP DE DE-GATA6-1 537 bp overlap
ChIP DE DE-GATA6-2 501 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 301 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 424 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 369 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 491 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 431 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 543 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 479 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 377 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 430 bp overlap
ChIP foregut GSE117136.GATA6.foregut 368 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 538 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 269 bp overlap
Gata3 1 dataset
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
HNF4A 3 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 125 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 398 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 321 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 321 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 286 bp overlap
JUND 2 datasets
Motif DE_36h DE_36h-JUND_MA0492.2 11 bp overlap
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 462 bp overlap
KLF5 3 datasets
ChIP HEK293 GSE88976.KLF5.HEK293 160 bp overlap
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 493 bp overlap
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 310 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 378 bp overlap
NCOR1 2 datasets
ChIP LS180 GSE39277.NCOR1.LS180 106 bp overlap
ChIP LS180_125 GSE39277.NCOR1.LS180_125 115 bp overlap
NFIA 1 dataset
Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 422 bp overlap
NR1H2 2 datasets
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 266 bp overlap
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 367 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 308 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 182 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 178 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 317 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 413 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 485 bp overlap
POLR2A 4 datasets
ChIP stomach ENCFF607ZPU 325 bp overlap
ChIP stomach ENCFF820WZN 112 bp overlap
ChIP stomach ENCFF820WZN 345 bp overlap
ChIP transverse colon ENCFF610RWV 172 bp overlap
POU5F1 1 dataset
Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap
PPARG 2 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 245 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 167 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 247 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 83 bp overlap
RAD21 2 datasets
ChIP GP5D GSE51234.RAD21.GP5D 478 bp overlap
ChIP GP5D_SIRAD21 GSE51234.RAD21.GP5D_SIRAD21 286 bp overlap
REST 2 datasets
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 247 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 238 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 212 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 564 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 563 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 179 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 715 bp overlap
SOX14 1 dataset
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
SOX8 1 dataset
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 240 bp overlap
ChIP Aska-SS GSE108025.SS18.Aska-SS 272 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
TBR1 1 dataset
Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap
TBX2 1 dataset
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
TCF4 1 dataset
ChIP LS180 GSE31939.TCF4.LS180 163 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 505 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 415 bp overlap
TRIM28 5 datasets
ChIP HEK293 ENCFF265CEM 572 bp overlap
ChIP HEK293 ENCFF582MWI 620 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 413 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 387 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 332 bp overlap
TRPS1 1 dataset
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
VDR 1 dataset
ChIP LS180_125 GSE31939.VDR.LS180_125 213 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 412 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 588 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 227 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 144 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 300 bp overlap
ZIC2 2 datasets
ChIP HEK293 ENCFF033NQQ 435 bp overlap
ChIP HEK293 ENCFF033NQQ 471 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 265 bp overlap
ZNF211 1 dataset
Motif DE_12h DE_12h-ZNF211_MA1974.2 10 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 157 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 624 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 512 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 292 bp overlap
ZNF382 1 dataset
Motif DE_36h DE_36h-ZNF382_MA1594.1 24 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 174 bp overlap
ZNF652 1 dataset
Motif DE_36h DE_36h-ZNF652_MA1657.2 9 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 361 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 343 bp overlap