chr2 : 192,749,500 – 192,750,079
579 bp 112 TFs 1 linked gene
This 579 bp open chromatin element is linked to PCGEM1 and is bound by 112 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PCGEM1 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:192,744,500 – 192,755,079
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
112 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 165 bp overlap
BCL6 2 datasets
Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 165 bp overlap
BRD2 3 datasets
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 224 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 236 bp overlap
ChIP SUM159PT_JQ1 GSE116879.BRD2.SUM159PT_JQ1 245 bp overlap
BRD4 4 datasets
ChIP HeLa GSE151038.BRD4.HeLa 265 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 419 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 392 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 285 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 200 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 137 bp overlap
CBX3 1 dataset
ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 166 bp overlap
CDX1 1 dataset
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
CDX4 1 dataset
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 145 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 250 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 406 bp overlap
CTCF 415 datasets
ChIP 22Rv1 ENCFF466OXN 492 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 525 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 560 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 313 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 158 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 517 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 500 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 299 bp overlap
ChIP A-549 ENCSR000BHW.CTCF.A-549 174 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 562 bp overlap
ChIP A549 ENCFF034FVO 331 bp overlap
ChIP A549 ENCFF669BWC 491 bp overlap
ChIP A673 ENCFF123WOM 330 bp overlap
ChIP BE2C ENCFF757SRF 163 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 394 bp overlap
ChIP C4-2B ENCFF821XVN 579 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 364 bp overlap
ChIP Caco-2 ENCFF753NZV 445 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 197 bp overlap
ChIP Calu3 ENCFF526MDS 481 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 226 bp overlap
ChIP D721Med ENCFF513FYD 211 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP DND-41 ENCFF913MRA 317 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 310 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 366 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 297 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 221 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 327 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 304 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 223 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 248 bp overlap
ChIP GM06990 ENCFF471OQT 297 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 311 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 249 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 397 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 156 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 125 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 119 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 127 bp overlap
ChIP GM12872 ENCFF697BYI 285 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 144 bp overlap
ChIP GM12873 ENCFF711LOS 285 bp overlap
ChIP GM12878 ENCFF485TGR 251 bp overlap
ChIP GM12878 ENCFF511URZ 205 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 171 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 285 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 167 bp overlap
ChIP GM23338 ENCFF531QOI 240 bp overlap
ChIP GM23338 ENCFF772DML 102 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 456 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 344 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H54 ENCFF255TVO 101 bp overlap
ChIP H9 ENCFF152GTF 341 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 579 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 261 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 422 bp overlap
ChIP HAP1_SCC4KO GSE94992.CTCF.HAP1_SCC4KO 256 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 358 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 400 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 427 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 452 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 476 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 487 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 423 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 552 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 488 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 512 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 544 bp overlap
ChIP HCT-116 GSE92879.CTCF.HCT-116 405 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 299 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 273 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 454 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 383 bp overlap
ChIP HCT116 ENCFF003KHP 212 bp overlap
ChIP HCT116 ENCFF209YMI 285 bp overlap
ChIP HCT116 ENCFF373YMA 385 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 156 bp overlap
ChIP HEC-1-B_F-mutation GSE140868.CTCF.HEC-1-B_F-mutation 116 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.CTCF.HEC-1-B_FFRR-insertion 263 bp overlap
ChIP HEC-1-B_FFRR-mutation GSE140868.CTCF.HEC-1-B_FFRR-mutation 185 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 280 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 299 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 120 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 232 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 520 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 227 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 117 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 147 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 307 bp overlap
ChIP HEK293T GSE103651.CTCF.HEK293T 63 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 252 bp overlap
ChIP HL-60 ENCSR000DUP.CTCF.HL-60 123 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 191 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 384 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 140 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 233 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 362 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 376 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 376 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 395 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 355 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 375 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 396 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 425 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 251 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 405 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 288 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 176 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 484 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 422 bp overlap
ChIP HeLa-S3_synchro GSE108173.CTCF.HeLa-S3_synchro 177 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 428 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 313 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 391 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 377 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 345 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 251 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 174 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 225 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 149 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 128 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP HepG2 ENCFF194VBQ 311 bp overlap
ChIP HepG2 ENCFF348BUL 58 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 144 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 428 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 407 bp overlap
ChIP IMR-5 GSE78957.CTCF.IMR-5 102 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 167 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 148 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 125 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 141 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 102 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 116 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 129 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 168 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 121 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 164 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 144 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 129 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 172 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 133 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 217 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 96 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 355 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 227 bp overlap
ChIP KMS-11 ENCFF853JKX 468 bp overlap
ChIP KMS-11 ENCFF853JKX 245 bp overlap
ChIP KMS-11_NSD2-High GSE131651.CTCF.KMS-11_NSD2-High 190 bp overlap
ChIP Kasumi-1_ctrl GSE121280.CTCF.Kasumi-1_ctrl 284 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 367 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 202 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 413 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 306 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 252 bp overlap
ChIP LNCAP ENCFF223HIG 361 bp overlap
ChIP LNCAP ENCFF700QXT 359 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 579 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 132 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 133 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 579 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 355 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 473 bp overlap
ChIP Loucy ENCFF359TVQ 252 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 483 bp overlap
ChIP MCF 10A ENCFF988BGF 365 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 408 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 234 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 439 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 364 bp overlap
ChIP MCF-7 ENCFF139NQI 277 bp overlap
ChIP MCF-7 ENCFF162GNE 169 bp overlap
ChIP MCF-7 ENCFF198DQX 102 bp overlap
ChIP MCF-7 ENCFF210JUZ 310 bp overlap
ChIP MCF-7 ENCFF494VXA 102 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 543 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 382 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 337 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 326 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 234 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 181 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 211 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 156 bp overlap
ChIP MCF-7 GSE124667.CTCF.MCF-7 176 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 328 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 457 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 392 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 337 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 359 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 294 bp overlap
ChIP MCF-7_CTCF2 GSE124667.CTCF.MCF-7_CTCF2 140 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 203 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 173 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 313 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 394 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 145 bp overlap
ChIP MCF-7_tamoxifen-resistant GSE118711.CTCF.MCF-7_tamoxifen-resistant 238 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 395 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 328 bp overlap
ChIP MIA-PaCa-2 GSE88734.CTCF.MIA-PaCa-2 305 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 338 bp overlap
ChIP NB4 ENCFF155DNY 251 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 194 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 517 bp overlap
ChIP NCI-H929 ENCFF305JAB 248 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 507 bp overlap
ChIP NPC GSE115407.CTCF.NPC 283 bp overlap
ChIP OCI-LY1 ENCFF455ESK 451 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 382 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 487 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 434 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 532 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 515 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 298 bp overlap
ChIP PC-3 ENCFF487TUI 317 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 536 bp overlap
ChIP PC-9 ENCFF539ULB 518 bp overlap
ChIP Panc1 ENCFF056JQX 364 bp overlap
ChIP RWPE-1 ENCSR303GFI.CTCF.RWPE-1 557 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 579 bp overlap
ChIP RWPE1 ENCFF200GQF 579 bp overlap
ChIP RWPE2 ENCFF911IEE 579 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 365 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 211 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 443 bp overlap
ChIP SK-N-SH ENCFF575DMG 409 bp overlap
ChIP SK-N-SH ENCFF731NJX 81 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 551 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 312 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 297 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 233 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 219 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 575 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 494 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 544 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 393 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 246 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 167 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 464 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 270 bp overlap
ChIP T-47D ENCSR000BNO.CTCF.T-47D 130 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 229 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 330 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 244 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 398 bp overlap
ChIP THP-1_PMA_Dex-0h GSE103477.CTCF.THP-1_PMA_Dex-0h 360 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.CTCF.THP-1_PMA_Dex-6h 317 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 328 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 435 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 573 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 490 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 579 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 461 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 462 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 438 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 503 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 520 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 396 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 462 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 410 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 254 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 298 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 391 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 243 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 376 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 293 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 389 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 370 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 404 bp overlap
ChIP VCaP ENCFF858YQT 579 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 579 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 338 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 253 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 224 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 227 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 270 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 215 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 213 bp overlap
ChIP astrocyte ENCFF042YJV 345 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 323 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 345 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 261 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 291 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 192 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 395 bp overlap
ChIP brain ENCFF067KUH 545 bp overlap
ChIP brain ENCFF099ASU 555 bp overlap
ChIP brain ENCFF099ASU 355 bp overlap
ChIP brain ENCFF163BBN 322 bp overlap
ChIP brain ENCFF163BBN 361 bp overlap
ChIP brain ENCFF685VRG 349 bp overlap
ChIP brain ENCFF685VRG 363 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 281 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 271 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 365 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 273 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 233 bp overlap
ChIP chondrocyte ENCFF134ORZ 579 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 492 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 426 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 471 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 365 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 477 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 350 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 485 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 457 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 500 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 452 bp overlap
ChIP endodermal cell ENCFF471YCZ 343 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 243 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 305 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 579 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 202 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 315 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 395 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 212 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 140 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 480 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 259 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 293 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 278 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 297 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 217 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 271 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 365 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 296 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 513 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 312 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 447 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 271 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 560 bp overlap
ChIP hepatocyte ENCFF263BLJ 171 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 393 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 210 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 186 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 269 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 151 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 190 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 197 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 196 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 145 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 226 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 238 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 344 bp overlap
ChIP islet ERP004003.CTCF.islet 275 bp overlap
ChIP keratinocyte ENCFF667ULX 325 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 579 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 257 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 207 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 139 bp overlap
ChIP keratinocyte_mut2 GSE123711.CTCF.keratinocyte_mut2 148 bp overlap
ChIP kidney ENCFF335EKK 185 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 297 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 367 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 340 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 358 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 460 bp overlap
ChIP liver_right-lobe-of ENCSR911GFJ.CTCF.liver_right-lobe-of 263 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 265 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 269 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 226 bp overlap
ChIP myotube ENCFF981UHL 371 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 386 bp overlap
ChIP nephron ENCFF411ACD 491 bp overlap
ChIP nephron ENCFF589HXU 156 bp overlap
ChIP nephron ENCFF589HXU 376 bp overlap
ChIP nephron ENCFF972IQB 465 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 504 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 503 bp overlap
ChIP neural cell ENCFF335ADI 351 bp overlap
ChIP neural crest cell ENCFF182LWK 197 bp overlap
ChIP neural crest cell ENCFF182LWK 327 bp overlap
ChIP neural progenitor cell ENCFF420RBO 340 bp overlap
ChIP neural progenitor cell ENCFF581WPG 330 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 512 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 389 bp overlap
ChIP neuron GSE115407.CTCF.neuron 231 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 387 bp overlap
ChIP osteocyte ENCFF929FPD 346 bp overlap
ChIP placenta ENCFF029PHY 461 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 319 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 282 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 281 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 407 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 522 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 579 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 239 bp overlap
ChIP prostate gland ENCFF655GBO 341 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 579 bp overlap
ChIP prostate_gland ENCSR829HTO.CTCF.prostate_gland 271 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 233 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 368 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 218 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 257 bp overlap
ChIP right lobe of liver ENCFF011NDG 149 bp overlap
ChIP right lobe of liver ENCFF250KSY 421 bp overlap
ChIP right lobe of liver ENCFF250KSY 355 bp overlap
ChIP right lobe of liver ENCFF523SCB 431 bp overlap
ChIP right lobe of liver ENCFF956UTA 377 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 291 bp overlap
ChIP smooth muscle cell ENCFF656FBT 357 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 340 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 319 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 152 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 219 bp overlap
ERF::HOXB13 1 dataset
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
ESR1 13 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 368 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 337 bp overlap
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 283 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 365 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 393 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 356 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 366 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 399 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 345 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 362 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 366 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 345 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 414 bp overlap
ESR1_pS118 1 dataset
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 362 bp overlap
ETV5::FOXO1 1 dataset
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 211 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 282 bp overlap
FOXA1 6 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 306 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 236 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 173 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 209 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 137 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 83 bp overlap
FOXA2 1 dataset
ChIP KerCT GSE90454.FOXA2.KerCT 186 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 282 bp overlap
FOXO4 1 dataset
ChIP HepG2 ENCFF909ISL 336 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
GATA3 2 datasets
ChIP Kelly GSE94822.GATA3.Kelly 366 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 223 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 396 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 226 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 397 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 213 bp overlap
HOXA10 1 dataset
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
HOXB13 4 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 182 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 82 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 86 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 226 bp overlap
HOXB9 1 dataset
Motif DE_12h DE_12h-HOXB9_MA1503.2 9 bp overlap
HOXC10 1 dataset
Motif DE_12h DE_12h-HOXC10_MA0905.2 9 bp overlap
HOXC11 1 dataset
Motif DE_12h DE_12h-HOXC11_MA0651.3 11 bp overlap
HOXC12 1 dataset
Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap
HOXC9 1 dataset
Motif DE_12h DE_12h-HOXC9_MA0485.3 9 bp overlap
HOXD10 1 dataset
Motif DE_12h DE_12h-HOXD10_MA1506.2 10 bp overlap
HOXD11 1 dataset
Motif DE_12h DE_12h-HOXD11_MA0908.2 9 bp overlap
HOXD12 1 dataset
Motif DE_12h DE_12h-HOXD12_MA0873.2 10 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Hmx2 1 dataset
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Hoxa11 1 dataset
Motif DE_12h DE_12h-Hoxa11_MA0911.2 9 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 389 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 218 bp overlap
KDM5B 2 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 196 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 103 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 164 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 300 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 180 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 242 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 326 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 307 bp overlap
MYF6 1 dataset
Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap
NR2F2 1 dataset
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 153 bp overlap
NR4A1 1 dataset
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
Nr2e1 1 dataset
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 371 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 358 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 382 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 394 bp overlap
PKNOX1 1 dataset
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RAD21 81 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 195 bp overlap
ChIP A549 ENCFF047SFC 251 bp overlap
ChIP A549 ENCFF264AHX 461 bp overlap
ChIP A549 ENCFF264AHX 349 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 220 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 388 bp overlap
ChIP H1 ENCFF698EWO 110 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 544 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 399 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 341 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 350 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 506 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 350 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 306 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 280 bp overlap
ChIP HCT116 ENCFF568PEO 130 bp overlap
ChIP HEC-1-B GSE139679.RAD21.HEC-1-B 268 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 236 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.RAD21.HEC-1-B_FFRR-insertion 64 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.RAD21.HEC-1-B_R1-insertion 159 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 283 bp overlap
ChIP HeLa-S3 ENCFF775CHI 231 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 296 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 453 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 204 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 143 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 98 bp overlap
ChIP HepG2 ENCFF963UBJ 257 bp overlap
ChIP Ishikawa ENCFF570JVV 225 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 228 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 220 bp overlap
ChIP MCF-7 ENCFF694KOM 216 bp overlap
ChIP MCF-7 ENCFF724VCQ 174 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 507 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 462 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 401 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 382 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 258 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 208 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 129 bp overlap
ChIP MDM GSE103477.RAD21.MDM 168 bp overlap
ChIP SK-N-SH ENCFF747MAS 165 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 434 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 579 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 336 bp overlap
ChIP THP-1_PMA_Dex-0h GSE103477.RAD21.THP-1_PMA_Dex-0h 262 bp overlap
ChIP THP-1_PMA_IFNb-0h GSE103477.RAD21.THP-1_PMA_IFNb-0h 317 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 234 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 417 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 330 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 445 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 387 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 302 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 469 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 346 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 232 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 255 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 262 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 367 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.RAD21.THP-1_siCtrl-NS1-Pam3csk-0h 216 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.RAD21.THP-1_siCtrl-NS1-Pam3csk-4h 277 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.RAD21.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 349 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.RAD21.THP-1_siCtrl-eGFP-Pam3csk-0h 248 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.RAD21.THP-1_siCtrl-eGFP-Pam3csk-4h 361 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.RAD21.THP-1_siWAPL-NS1-Pam3csk-4h 242 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.RAD21.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 335 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.RAD21.THP-1_siWAPL-eGFP-Pam3csk-4h 304 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 281 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 250 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 127 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 343 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 258 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 161 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 231 bp overlap
ChIP liver ENCFF485PAC 225 bp overlap
ChIP liver ENCFF522JHE 174 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 466 bp overlap
ChIP neural cell ENCFF564MOT 299 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 340 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 163 bp overlap
REST 1 dataset
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 233 bp overlap
RFX2 1 dataset
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 61 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 282 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 176 bp overlap
SMC1 5 datasets
ChIP DKO GSE131606.SMC1.DKO 191 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 401 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 204 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 243 bp overlap
ChIP HMEC-1 GSE101921.SMC1.HMEC-1 153 bp overlap
SMC1A 7 datasets
ChIP A-549 GSE76893.SMC1A.A-549 193 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 217 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 288 bp overlap
ChIP MCF-7 GSE115602.SMC1A.MCF-7 200 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 166 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 342 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 265 bp overlap
SMC1A-B 3 datasets
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 176 bp overlap
ChIP TC-32 GSE115250.SMC1A-B.TC-32 301 bp overlap
ChIP TC-71 GSE115250.SMC1A-B.TC-71 187 bp overlap
SMC3 16 datasets
ChIP A549 ENCFF079FKB 429 bp overlap
ChIP GP5D GSE51234.SMC3.GP5D 349 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 355 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 355 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 355 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 362 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 328 bp overlap
ChIP HeLa-Kyoto_WT GSE138405.SMC3.HeLa-Kyoto_WT 171 bp overlap
ChIP HeLa-S3 ENCFF992MML 261 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 150 bp overlap
ChIP Hep-G2 ENCSR000EDW.SMC3.Hep-G2 145 bp overlap
ChIP HepG2 ENCFF745UAV 271 bp overlap
ChIP SK-N-SH ENCFF791WFB 241 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 190 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 391 bp overlap
ChIP neural cell ENCFF795YGY 510 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 161 bp overlap
STAG1 11 datasets
ChIP CHRF28811 ERP008568.STAG1.CHRF28811 263 bp overlap
ChIP HMEC-1 GSE101921.STAG1.HMEC-1 249 bp overlap
ChIP HeLa GSE126990.STAG1.HeLa 545 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 545 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 314 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 199 bp overlap
ChIP HepG2 ENCFF843EBZ 301 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 300 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 270 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 187 bp overlap
ChIP OCI-AML-3_deltaSTAG2 GSE111537.STAG1.OCI-AML-3_deltaSTAG2 122 bp overlap
STAG2 3 datasets
ChIP HL-60 GSE131577.STAG2.HL-60 169 bp overlap
ChIP MCF-10A_siSTAG1 GSE101921.STAG2.MCF-10A_siSTAG1 166 bp overlap
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 286 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT3 2 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 241 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Stat5a::Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 325 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 385 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 344 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 344 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 173 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
ChIP SK-N-SH ENCFF869XXQ 275 bp overlap
TFAP2C 4 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 182 bp overlap
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 266 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 308 bp overlap
TRIM22 2 datasets
ChIP MCF-7 ENCFF596XRL 371 bp overlap
ChIP MCF-7 ENCSR875PEI.TRIM22.MCF-7 234 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 216 bp overlap
TWIST1 6 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 384 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 372 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 267 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 259 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 372 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 400 bp overlap
Tcf21 1 dataset
Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 172 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 101 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 155 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 158 bp overlap
ZNF189 1 dataset
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF382 1 dataset
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 181 bp overlap
ZXDC 1 dataset
ChIP MCF-7 GSE97661.ZXDC.MCF-7 249 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Huangfu Lab · Publications · Resources · Contact