chr2 : 181,106,257 181,106,591
334 bp 88 TFs 0 linked genes
This 334 bp open chromatin element has no linked target genes and is bound by 88 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:181,101,257 – 181,111,591
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
ARRB1 1 dataset
ChIP prostate GSE55615.ARRB1.prostate 177 bp overlap
ATRX 2 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 334 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 334 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 283 bp overlap
BRD2 1 dataset
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 217 bp overlap
BRD3 2 datasets
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 279 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 332 bp overlap
BRD4 10 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 334 bp overlap
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 314 bp overlap
ChIP KK-1_DMSO GSE94732.BRD4.KK-1_DMSO 334 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 77 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 267 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 116 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 272 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 113 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 292 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 173 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 254 bp overlap
CDK9 1 dataset
ChIP A-375_DMSO GSE68052.CDK9.A-375_DMSO 133 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 334 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 322 bp overlap
CRY2 1 dataset
ChIP U2OS GSE130602.CRY2.U2OS 272 bp overlap
CSRNP3 1 dataset
ChIP SK-N-SH ENCFF710BXD 258 bp overlap
CTCF 6 datasets
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 115 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 209 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 181 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 97 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 116 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 173 bp overlap
EP300 3 datasets
ChIP SK-N-SH ENCFF829RWA 301 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 301 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 200 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 129 bp overlap
ESRRA 1 dataset
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 219 bp overlap
EZH2 1 dataset
ChIP SU-DHL-6 GSE45982.EZH2.SU-DHL-6 194 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 181 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 197 bp overlap
ChIP DE DE-FOXA2-1 282 bp overlap
ChIP DE DE-FOXA2-2 235 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 319 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 188 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 305 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 314 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 334 bp overlap
ChIP SK-N-SH ENCFF764OZD 325 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 322 bp overlap
GATA3 8 datasets
ChIP BE2C GSE65664.GATA3.BE2C 253 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 179 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 247 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 232 bp overlap
ChIP SH-SY5Y ENCFF475HYF 302 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 184 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 174 bp overlap
ChIP SK-N-SH ENCFF040SSB 331 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 291 bp overlap
ChIP DE DE-GATA4-1 334 bp overlap
ChIP DE DE-GATA4-2 334 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 334 bp overlap
ChIP DE DE-GATA6-2 334 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 334 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 334 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 334 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 157 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 334 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 334 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 334 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 99 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 334 bp overlap
HDAC2 2 datasets
ChIP PC-3 GSE147455.HDAC2.PC-3 155 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 247 bp overlap
HMGA2 1 dataset
ChIP WTC11 ENCFF535JLP 56 bp overlap
IRF4 2 datasets
ChIP BC-3 GSE132777.IRF4.BC-3 324 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 334 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 334 bp overlap
ChIP SK-N-SH ENCFF285GEQ 254 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 333 bp overlap
JUNB 2 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 192 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 247 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 214 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 334 bp overlap
KMT2A 2 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 207 bp overlap
ChIP MV4-11 GSE79899.KMT2A.MV4-11 220 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 152 bp overlap
MAX 2 datasets
ChIP SK-N-SH ENCFF285LXR 298 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 161 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 334 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 135 bp overlap
MYCN 13 datasets
ChIP BE2C GSE80151.MYCN.BE2C 214 bp overlap
ChIP CHP-134 GSE129588.MYCN.CHP-134 207 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 307 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 331 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 239 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 334 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 334 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 252 bp overlap
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 114 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 211 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 205 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 214 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 299 bp overlap
MYOD1 3 datasets
ChIP RD GSE137168.MYOD1.RD 239 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 267 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 167 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 243 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 302 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 321 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 175 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 202 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 232 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 150 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 245 bp overlap
OTX2 2 datasets
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 186 bp overlap
ChIP retina_pigment GSE60024.OTX2.retina_pigment 232 bp overlap
PAX3-FOXO1 2 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 325 bp overlap
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 236 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 307 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 334 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 202 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 334 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 247 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 334 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 135 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 138 bp overlap
RAD21 3 datasets
ChIP IMR-5 GSE78957.RAD21.IMR-5 139 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 265 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 257 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 334 bp overlap
REST 1 dataset
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 184 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 248 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 174 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 299 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 334 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 334 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 273 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 334 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 334 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 334 bp overlap
SMAD3 3 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 194 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 218 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 266 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 156 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 260 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 263 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 259 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 269 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 334 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 264 bp overlap
SMC1 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 163 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 156 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 209 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 149 bp overlap
STAT1 1 dataset
ChIP FaDu_DMSO GSE78212.STAT1.FaDu_DMSO 191 bp overlap
STAT3 2 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 307 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 253 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 126 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 271 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 299 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 150 bp overlap
TCF4 3 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 295 bp overlap
ChIP SK-N-SH ENCFF270OWF 334 bp overlap
ChIP SK-N-SH ENCFF270OWF 155 bp overlap
TEAD1 2 datasets
ChIP CCLP1 GSE62272.TEAD1.CCLP1 151 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 223 bp overlap
TEAD4 3 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 334 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 334 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 188 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 255 bp overlap
TOX2 1 dataset
ChIP SK-N-SH ENCFF415OYE 247 bp overlap
TP53 1 dataset
ChIP SaOS-2 GSE15780.TP53.SaOS-2 295 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 267 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 200 bp overlap
TWIST1 6 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 279 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 334 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 228 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 234 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 334 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 279 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 195 bp overlap
YY1 2 datasets
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 334 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 233 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 249 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 237 bp overlap
ZC3H10 1 dataset
ChIP SK-N-SH ENCFF465WAR 291 bp overlap
ZNF311 2 datasets
ChIP K-562 ENCSR388ZRV.ZNF311.K-562 156 bp overlap
ChIP K562 ENCFF986QSP 164 bp overlap
ZNF549 4 datasets
ChIP HEK293 ENCFF528IUI 324 bp overlap
ChIP HEK293 ENCFF565EYY 323 bp overlap
ChIP HEK293 ENCSR185QFX.ZNF549.HEK293 288 bp overlap
ChIP HEK293 GSE76494.ZNF549.HEK293 157 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 271 bp overlap
ZNF8 1 dataset
ChIP SK-N-SH ENCFF131SMT 282 bp overlap