chr2 : 174,328,457 – 174,328,986
529 bp 86 TFs 3 linked genes
This 529 bp open chromatin element is linked to LINC01305, SP9, and ENSG00000280414 and is bound by 86 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC01305 2.4 kb Proximal Proximity
SP9 6.0 kb Proximal Proximity
ENSG00000280414 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:174,323,457 – 174,333,986
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
AHR 2 datasets
ChIP MCF-7_DMSO_45min GSE90550.AHR.MCF-7_DMSO_45min 108 bp overlap
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 139 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 146 bp overlap
ARID1A 1 dataset
ChIP RMG-I GSE104545.ARID1A.RMG-I 236 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 331 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 233 bp overlap
BCL6 4 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 293 bp overlap
ChIP CD4 GSE59933.BCL6.CD4 136 bp overlap
ChIP HepG2 ENCFF423EJH 244 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 253 bp overlap
BCOR 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 324 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 529 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 529 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 346 bp overlap
BRD2 2 datasets
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 529 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 352 bp overlap
BRD4 5 datasets
ChIP 402-91 GSE111253.BRD4.402-91 212 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 266 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 238 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 335 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 342 bp overlap
CBX2 1 dataset
ChIP HepG2 ENCFF838BNI 293 bp overlap
CBX7 2 datasets
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 52 bp overlap
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 343 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 285 bp overlap
CREB1 2 datasets
ChIP A-549 ENCSR000BRB.CREB1.A-549 362 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 346 bp overlap
CREB3L1 2 datasets
ChIP K-562 ENCSR109YGM.CREB3L1.K-562 128 bp overlap
ChIP K562 ENCFF701TVD 187 bp overlap
CTCF 7 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 137 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 156 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 100 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 231 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 171 bp overlap
ChIP chondrocyte ENCFF134ORZ 255 bp overlap
ChIP endodermal cell ENCFF471YCZ 219 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 355 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 204 bp overlap
DNMT3B 1 dataset
ChIP Hep-G2 ENCSR283OLA.DNMT3B.Hep-G2 160 bp overlap
E2F6 2 datasets
ChIP A-549 ENCSR000BTC.E2F6.A-549 154 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 222 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 147 bp overlap
EP300 1 dataset
ChIP A-549 ENCSR000BPW.EP300.A-549 339 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 270 bp overlap
EZH2 27 datasets
ChIP B cell ENCFF803EMO 219 bp overlap
ChIP GM23248 ENCFF404ZHM 53 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 91 bp overlap
ChIP GM23338 ENCFF613YON 209 bp overlap
ChIP GM23338 ENCFF613YON 209 bp overlap
ChIP H1 ENCFF232NZA 173 bp overlap
ChIP H1 ENCFF232NZA 435 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 366 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 378 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 341 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 113 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 529 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 529 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 270 bp overlap
ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 203 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 376 bp overlap
ChIP SK-N-SH ENCFF657FZK 211 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 391 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 202 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 283 bp overlap
ChIP fibroblast of lung ENCFF479BAW 444 bp overlap
ChIP fibroblast of lung ENCFF479BAW 192 bp overlap
ChIP hepatocyte ENCFF552DZB 241 bp overlap
ChIP keratinocyte ENCFF070STK 113 bp overlap
ChIP neural progenitor cell ENCFF018MKA 166 bp overlap
ChIP neural progenitor cell ENCFF018MKA 462 bp overlap
ChIP neural progenitor cell ENCFF472NFV 529 bp overlap
EZH2_phosphoT487 2 datasets
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 215 bp overlap
ChIP OCI-Ly7 ENCSR565XSL.EZH2_phosphoT487.OCI-Ly7 169 bp overlap
FOSL2 1 dataset
ChIP A-549 ENCSR000BQO.FOSL2.A-549 275 bp overlap
FOXA1 4 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 260 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 175 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 142 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 156 bp overlap
GATA3 3 datasets
ChIP A-549 ENCSR000BTI.GATA3.A-549 231 bp overlap
ChIP A549 ENCFF226FVV 361 bp overlap
ChIP A549 ENCFF226FVV 161 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 231 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 203 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 201 bp overlap
HNRNPLL 3 datasets
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 300 bp overlap
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 300 bp overlap
ChIP HepG2 ENCFF952XAB 396 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 250 bp overlap
JARID2 6 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 267 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 346 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 291 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 307 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 288 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 303 bp overlap
JUN 1 dataset
ChIP A549 ENCFF846DUV 521 bp overlap
KDM1A 2 datasets
ChIP H1 ENCFF696SGD 178 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 453 bp overlap
KDM2A 1 dataset
ChIP HepG2 ENCFF491GTR 386 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 529 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 210 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KMT2A 4 datasets
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 250 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 281 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 435 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 334 bp overlap
MAX 3 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 317 bp overlap
ChIP A549 ENCFF310XGQ 337 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 313 bp overlap
MBD1 2 datasets
ChIP Hep-G2 ENCSR260UJI.MBD1.Hep-G2 169 bp overlap
ChIP K562 ENCFF741LIL 245 bp overlap
MBD1_ISOF1 1 dataset
ChIP Hep-G2 ENCSR396QWK.MBD1_ISOF1.Hep-G2 146 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 313 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 152 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 113 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 114 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 247 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 259 bp overlap
NR3C1 4 datasets
ChIP A-549 ENCSR000BJR.NR3C1.A-549 507 bp overlap
ChIP A-549 ENCSR000BHF.NR3C1.A-549 294 bp overlap
ChIP A-549 ENCSR000BHG.NR3C1.A-549 168 bp overlap
ChIP A-549 ENCSR000BJT.NR3C1.A-549 100 bp overlap
NR5A2 2 datasets
ChIP A-549 ENCSR190GIW.NR5A2.A-549 244 bp overlap
ChIP A549 ENCFF834RVE 330 bp overlap
OVOL1 2 datasets
ChIP MCF-7 ENCFF537GWI 371 bp overlap
ChIP MCF-7 ENCSR829WBA.OVOL1.MCF-7 224 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 250 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 200 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 177 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF706IUS 293 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 529 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 245 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 168 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 529 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 193 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 87 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 182 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 59 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 390 bp overlap
RNF2 6 datasets
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 135 bp overlap
ChIP H1 ENCFF239FFS 249 bp overlap
ChIP H1 ENCFF239FFS 59 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 71 bp overlap
ChIP K-562 ENCSR138FUZ.RNF2.K-562 130 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 529 bp overlap
SIN3A 2 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 180 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 75 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 94 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 129 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 344 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 219 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 317 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 529 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 54 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 124 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 315 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 482 bp overlap
SUZ12 9 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 224 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 151 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 251 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 100 bp overlap
ChIP H1 ENCFF881NFR 186 bp overlap
ChIP H1 ENCFF881NFR 529 bp overlap
ChIP NT2/D1 ENCFF574SXS 363 bp overlap
ChIP NT2/D1 ENCFF574SXS 529 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 389 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 350 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 234 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 208 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 282 bp overlap
YY1 2 datasets
ChIP WA01 ENCSR000BKD.YY1.WA01 75 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 127 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 77 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 393 bp overlap
ChIP K562 ENCFF875HLX 372 bp overlap
ZBTB7A 1 dataset
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 91 bp overlap
ZBTB7B 1 dataset
ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 172 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 205 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 213 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 79 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 289 bp overlap
ZNF777 1 dataset
ChIP Hep-G2 ENCSR068ZQR.ZNF777.Hep-G2 215 bp overlap
ZNF800 1 dataset
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 164 bp overlap
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