chr2 : 152,434,228 152,435,046
818 bp 129 TFs 0 linked genes
This 818 bp open chromatin element has no linked target genes and is bound by 129 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:152,429,228 – 152,440,046
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
129 transcription factors
Source
Cell type
ALX3 2 datasets
Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap
Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap
AR 17 datasets
ChIP LNCaP GSE110655.AR.LNCaP 151 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 291 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 170 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 180 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 186 bp overlap
ChIP LTAD_EtOH GSE94577.AR.LTAD_EtOH 315 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 261 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 109 bp overlap
ChIP VCaP GSE148358.AR.VCaP 276 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 317 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 242 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 347 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 374 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 223 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 148 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 150 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.AR.prostate-cancer_PDX_136 122 bp overlap
ARGFX 2 datasets
Motif DE_36h DE_36h-ARGFX_MA1463.2 8 bp overlap
Motif DE_36h DE_36h-ARGFX_MA1463.2 8 bp overlap
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 398 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 326 bp overlap
ASCL1 2 datasets
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 172 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 137 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 272 bp overlap
ATF6 1 dataset
Motif DE_12h DE_12h-ATF6_MA1466.2 13 bp overlap
Alx1 2 datasets
Motif DE_36h DE_36h-Alx1_MA0854.2 8 bp overlap
Motif DE_36h DE_36h-Alx1_MA0854.2 8 bp overlap
Alx4 1 dataset
Motif DE_36h DE_36h-Alx4_MA0853.2 12 bp overlap
Arid3a 1 dataset
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
Arx 1 dataset
Motif DE_36h DE_36h-Arx_MA0874.2 10 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 194 bp overlap
BRD4 2 datasets
ChIP NMC24335 GSE96775.BRD4.NMC24335 159 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 126 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 417 bp overlap
CHD7 2 datasets
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 204 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 191 bp overlap
CREB3L1 1 dataset
Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap
DRGX 2 datasets
Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap
Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap
EMX1 2 datasets
Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap
Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap
EMX2 2 datasets
Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap
Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap
EN1 2 datasets
Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap
Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap
EN2 1 dataset
Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 340 bp overlap
ESX1 2 datasets
Motif DE_36h DE_36h-ESX1_MA0644.3 7 bp overlap
Motif DE_36h DE_36h-ESX1_MA0644.3 7 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 493 bp overlap
EVX1 2 datasets
Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap
Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap
EVX2 2 datasets
Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap
Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 356 bp overlap
FOXA1 8 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 227 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 169 bp overlap
ChIP HepG2 ENCFF207NVJ 243 bp overlap
ChIP HepG2 ENCFF740VZW 271 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 156 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 105 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 109 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 80 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 395 bp overlap
ChIP DE DE-FOXA2-2 497 bp overlap
ChIP HepG2 ENCFF533COJ 266 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 156 bp overlap
FOXP4 1 dataset
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 152 bp overlap
Foxq1 1 dataset
Motif DE_36h DE_36h-Foxq1_MA0040.2 10 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 594 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 685 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 438 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 530 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 511 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 592 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 662 bp overlap
GATAD2A 2 datasets
ChIP HepG2 ENCFF252XNH 341 bp overlap
ChIP HepG2 ENCFF252XNH 115 bp overlap
GBX1 1 dataset
Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
GSX1 2 datasets
Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap
Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_36h DE_36h-GSX2_MA0893.3 7 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 324 bp overlap
HNF1A 1 dataset
Motif DE_36h DE_36h-HNF1A_MA0046.3 13 bp overlap
HNF1B 1 dataset
Motif DE_36h DE_36h-HNF1B_MA0153.2 13 bp overlap
HNF4A 4 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 134 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 129 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 116 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 129 bp overlap
HOXA1 2 datasets
Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap
Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap
HOXA10 1 dataset
Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap
HOXA2 2 datasets
Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap
Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap
HOXA5 1 dataset
Motif DE_36h DE_36h-HOXA5_MA0158.2 8 bp overlap
HOXB1 1 dataset
Motif DE_36h DE_36h-HOXB1_MA2093.1 7 bp overlap
HOXB2 2 datasets
Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap
Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap
HOXB3 2 datasets
Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap
Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap
HOXB5 2 datasets
Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap
Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap
HOXC8 2 datasets
Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap
Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap
ISX 2 datasets
Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap
Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap
JUND 1 dataset
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 134 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 163 bp overlap
KMT2A 1 dataset
ChIP SEM GSE83671.KMT2A.SEM 670 bp overlap
LBX1 1 dataset
Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap
LHX5 1 dataset
Motif DE_36h DE_36h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap
LHX9 1 dataset
Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap
LMX1A 2 datasets
Motif DE_36h DE_36h-LMX1A_MA0702.3 7 bp overlap
Motif DE_36h DE_36h-LMX1A_MA0702.3 7 bp overlap
LMX1B 2 datasets
Motif DE_36h DE_36h-LMX1B_MA0703.3 8 bp overlap
Motif DE_36h DE_36h-LMX1B_MA0703.3 8 bp overlap
Lef1 1 dataset
Motif DE_36h DE_36h-Lef1_MA0768.3 8 bp overlap
Lhx1 1 dataset
Motif DE_36h DE_36h-Lhx1_MA1518.3 10 bp overlap
Lhx4 2 datasets
Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap
Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap
Lhx8 2 datasets
Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap
Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap
MAX 3 datasets
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 195 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF507HCX 466 bp overlap
MEOX1 1 dataset
Motif DE_36h DE_36h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_36h DE_36h-MEOX2_MA0706.2 7 bp overlap
MIXL1 2 datasets
Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap
Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap
MNX1 2 datasets
Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap
Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 217 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 278 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 807 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 242 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 818 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 816 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 817 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 645 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 818 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 145 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 139 bp overlap
NKX6-1 1 dataset
Motif DE_36h DE_36h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 2 datasets
Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap
Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap
NOTO 2 datasets
Motif DE_36h DE_36h-NOTO_MA0710.2 7 bp overlap
Motif DE_36h DE_36h-NOTO_MA0710.2 7 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 138 bp overlap
Nr2e3 1 dataset
Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap
ONECUT3 1 dataset
Motif DE_36h DE_36h-ONECUT3_MA0757.2 12 bp overlap
PAX4 1 dataset
Motif DE_36h DE_36h-PAX4_MA0068.2 8 bp overlap
PAXIP1 3 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 216 bp overlap
ChIP HepG2 ENCFF526NOJ 436 bp overlap
ChIP HepG2 ENCFF526NOJ 235 bp overlap
PDX1 2 datasets
Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap
Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap
PLAGL2 1 dataset
Motif DE_36h DE_36h-PLAGL2_MA1548.2 8 bp overlap
POU4F1 1 dataset
Motif DE_36h DE_36h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_36h DE_36h-POU4F3_MA0791.2 12 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 718 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 665 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 688 bp overlap
POU6F1 2 datasets
Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap
Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap
POU6F2 1 dataset
Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap
PRRX1 2 datasets
Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap
Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap
PRRX2 1 dataset
Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap
RAX2 2 datasets
Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap
Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap
RBM22 1 dataset
ChIP HepG2 ENCFF561IAJ 388 bp overlap
RELA 1 dataset
ChIP KB GSE52469.RELA.KB 103 bp overlap
SHOX 2 datasets
Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap
Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 355 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 303 bp overlap
SMARCA4 6 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 218 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 227 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 240 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 222 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 300 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 761 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 224 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 797 bp overlap
SMARCC1 5 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 327 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 318 bp overlap
ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 272 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 283 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 728 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 174 bp overlap
Shox2 2 datasets
Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap
Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 225 bp overlap
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 255 bp overlap
TLX2 2 datasets
Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap
Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap
UNCX 2 datasets
Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap
Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap
VAX1 2 datasets
Motif DE_36h DE_36h-VAX1_MA0722.2 7 bp overlap
Motif DE_36h DE_36h-VAX1_MA0722.2 7 bp overlap
VAX2 2 datasets
Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap
Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap
VSX1 2 datasets
Motif DE_36h DE_36h-VSX1_MA0725.2 7 bp overlap
Motif DE_36h DE_36h-VSX1_MA0725.2 7 bp overlap
VSX2 2 datasets
Motif DE_36h DE_36h-VSX2_MA0726.2 7 bp overlap
Motif DE_36h DE_36h-VSX2_MA0726.2 7 bp overlap
ZBTB26 1 dataset
ChIP HepG2 ENCFF492SAJ 255 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 153 bp overlap
ZIC2 2 datasets
ChIP HEK293 ENCFF033NQQ 471 bp overlap
ChIP HEK293 ENCFF033NQQ 471 bp overlap
ZNF331 1 dataset
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
ZNF354A 1 dataset
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
ZNF384 1 dataset
Motif DE_36h DE_36h-ZNF384_MA1125.2 8 bp overlap
ZNF558 1 dataset
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 254 bp overlap
mix-a 1 dataset
Motif DE_36h DE_36h-mix-a_MA0621.2 7 bp overlap