chr20 : 46,995,396 46,995,949
553 bp 85 TFs 2 linked genes
This 553 bp open chromatin element is linked to EYA2 and SLC2A10 and is bound by 85 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
EYA2 101.1 kb Distal Multiome
SLC2A10 286.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:46,990,396 – 47,000,949
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
ATF7 3 datasets
ChIP GM12878 ENCFF037PYH 249 bp overlap
ChIP GM12878 ENCFF037PYH 309 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 451 bp overlap
BACH1 2 datasets
ChIP GM12878 ENCFF576UEQ 365 bp overlap
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 264 bp overlap
BCL11A 3 datasets
ChIP GM12878 ENCFF717YPR 163 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 302 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 151 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 308 bp overlap
BCOR 3 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 87 bp overlap
ChIP K562 ENCFF343XWA 231 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 156 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCFF521IZR 405 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 362 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 251 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 214 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 496 bp overlap
BRD4 3 datasets
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 538 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 453 bp overlap
ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 259 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 327 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 221 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 553 bp overlap
EBF1 5 datasets
ChIP GM12878 ENCFF167CZS 228 bp overlap
ChIP GM12878 ENCFF813OXE 81 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 406 bp overlap
ChIP LCL GSE75503.EBF1.LCL 230 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 490 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 304 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 427 bp overlap
EP300 4 datasets
ChIP GM12878 ENCFF039QRE 351 bp overlap
ChIP GM12878 ENCSR000DZG.EP300.GM12878 215 bp overlap
ChIP hESC GSE17917.EP300.hESC 368 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 301 bp overlap
ESRRA 3 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 153 bp overlap
ChIP K562 ENCFF968PEP 215 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 91 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 342 bp overlap
EZH2 2 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 330 bp overlap
ChIP neural progenitor cell ENCFF018MKA 450 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 211 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 490 bp overlap
ChIP DE DE-FOXA2-2 492 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 164 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 524 bp overlap
ChIP DE DE-GATA4-2 530 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 480 bp overlap
ChIP DE DE-GATA6-2 553 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 352 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 471 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 448 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 428 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 515 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 431 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 395 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 463 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 509 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 553 bp overlap
GTF2I 2 datasets
ChIP K562 ENCFF539BYI 161 bp overlap
ChIP WTC11 ENCFF255XXZ 205 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000BNR.HDAC2.WA01 115 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 71 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 390 bp overlap
ChIP GM12878 ENCFF824TGK 333 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 206 bp overlap
ChIP GM12878 ENCFF918AID 443 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 547 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 353 bp overlap
IRF4 1 dataset
ChIP BC-3 GSE132777.IRF4.BC-3 159 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 314 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 304 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 425 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 382 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 425 bp overlap
KDM1A 2 datasets
ChIP H1 ENCFF696SGD 191 bp overlap
ChIP K562 ENCFF934ZRG 214 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 553 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 553 bp overlap
MED1 2 datasets
ChIP GM12878 GSE93080.MED1.GM12878 196 bp overlap
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 519 bp overlap
MEF2B 2 datasets
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 553 bp overlap
ChIP KARPAS422 GSE69558.MEF2B.KARPAS422 348 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 398 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 278 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 520 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 531 bp overlap
MYC 2 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 446 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 529 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 383 bp overlap
NANOG 5 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 320 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 291 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 424 bp overlap
ChIP hESC GSE18292.NANOG.hESC 296 bp overlap
NBN 3 datasets
ChIP GM12878 ENCFF213ZNN 499 bp overlap
ChIP GM12878 ENCFF213ZNN 296 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 460 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 284 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 280 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 457 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 336 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 373 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 182 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 429 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 341 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 217 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 118 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 328 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 512 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 496 bp overlap
RBM25 1 dataset
ChIP K-562 ENCSR791OZM.RBM25.K-562 161 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 304 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 523 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 550 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 170 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 236 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 274 bp overlap
SMAD1 1 dataset
ChIP GM12878 ENCSR813DCK.SMAD1.GM12878 221 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 181 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 529 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 517 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 421 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 359 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 500 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 408 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 428 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 502 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMARCA5 3 datasets
ChIP GM12878 ENCFF327LDR 130 bp overlap
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 270 bp overlap
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 90 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 379 bp overlap
ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 162 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 207 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 386 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 479 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 96 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 339 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 368 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 138 bp overlap
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 361 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 335 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 388 bp overlap
TCF12 4 datasets
ChIP GM12878 ENCFF433DMU 341 bp overlap
ChIP GM12878 ENCFF506WWB 257 bp overlap
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 249 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 253 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 175 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 395 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 132 bp overlap
ZMYM3 4 datasets
ChIP Hep-G2_Ab_JH39-2-2F10 GSE97661.ZMYM3.Hep-G2_Ab_JH39-2-2F10 91 bp overlap
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 141 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 126 bp overlap
ChIP K562 ENCFF361LXT 213 bp overlap
ZNF217 2 datasets
ChIP GM12878 ENCFF978IGL 231 bp overlap
ChIP GM12878 ENCSR764CZW.ZNF217.GM12878 211 bp overlap
ZNF24 8 datasets
ChIP GM12878 ENCFF688STO 128 bp overlap
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 500 bp overlap
ChIP K-562 ENCSR385AHH.ZNF24.K-562 169 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 71 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 69 bp overlap
ChIP K562 ENCFF615YYW 161 bp overlap
ChIP K562 ENCFF781QQQ 143 bp overlap
ChIP K562 ENCFF877JCX 186 bp overlap
ZNF384 1 dataset
ChIP GM12878 ENCFF229VSP 321 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 107 bp overlap
ChIP HepG2 ENCFF490FFQ 197 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 208 bp overlap