chr20 : 36,736,742 – 36,737,107
365 bp 131 TFs 1 linked gene
This 365 bp open chromatin element is linked to NDRG3 and is bound by 131 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NDRG3 9.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:36,731,742 – 36,742,107
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
131 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 365 bp overlap
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BRD4 2 datasets
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 203 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 151 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 214 bp overlap
CTCF 3 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
DMRTA1 1 dataset
Motif DE_24h DE_24h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_24h DE_24h-DMRTA2_MA1478.2 6 bp overlap
EHF 1 dataset
Motif DE_24h DE_24h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_24h DE_24h-ELF1_MA0473.4 9 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 168 bp overlap
ELF2 1 dataset
Motif DE_24h DE_24h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_24h DE_24h-ELF3_MA0640.3 9 bp overlap
ELF4 1 dataset
Motif DE_24h DE_24h-ELF4_MA0641.1 12 bp overlap
ELK1 1 dataset
Motif DE_24h DE_24h-ELK1_MA0028.3 9 bp overlap
ELK4 1 dataset
Motif DE_24h DE_24h-ELK4_MA0076.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 357 bp overlap
EP300 2 datasets
ChIP AML GSE131939.EP300.AML 194 bp overlap
ChIP AML_shaml1-eto GSE131939.EP300.AML_shaml1-eto 199 bp overlap
ERF 1 dataset
Motif DE_24h DE_24h-ERF_MA0760.2 9 bp overlap
ERF::FOXI1 2 datasets
Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_24h DE_24h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 1 dataset
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
ERG 4 datasets
ChIP ME-1 GSE46044.ERG.ME-1 344 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 275 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 332 bp overlap
ChIP aortic-endothelial-cell_D44 GSE139377.ERG.aortic-endothelial-cell_D44 167 bp overlap
ETS1 2 datasets
Motif DE_24h DE_24h-ETS1_MA0098.4 9 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 314 bp overlap
ETS2 1 dataset
Motif DE_24h DE_24h-ETS2_MA1484.2 9 bp overlap
ETV1 1 dataset
Motif DE_24h DE_24h-ETV1_MA0761.3 9 bp overlap
ETV2 1 dataset
Motif DE_24h DE_24h-ETV2_MA0762.2 9 bp overlap
ETV2::FIGLA 1 dataset
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV2::FOXI1 2 datasets
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_24h DE_24h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV3 1 dataset
Motif DE_24h DE_24h-ETV3_MA0763.2 9 bp overlap
ETV4 1 dataset
Motif DE_24h DE_24h-ETV4_MA0764.4 9 bp overlap
ETV5::FIGLA 1 dataset
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
ETV5::FOXI1 1 dataset
Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap
ETV6 1 dataset
Motif DE_24h DE_24h-ETV6_MA0645.2 9 bp overlap
ETV7 1 dataset
Motif DE_24h DE_24h-ETV7_MA1708.2 9 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
Elf5 1 dataset
Motif DE_24h DE_24h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_24h DE_24h-Erg_MA0474.4 10 bp overlap
FEV 1 dataset
Motif DE_24h DE_24h-FEV_MA0156.4 9 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 156 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FLI1 2 datasets
Motif DE_24h DE_24h-FLI1_MA0475.3 9 bp overlap
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 296 bp overlap
FLI1::FOXI1 2 datasets
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_24h DE_24h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 322 bp overlap
ChIP DE DE-FOXA2-2 279 bp overlap
FOXJ2::ELF1 1 dataset
Motif DE_24h DE_24h-FOXJ2ELF1_MA1952.2 11 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 163 bp overlap
FOXO1::ELF1 2 datasets
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif DE_24h DE_24h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 2 datasets
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_24h DE_24h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 1 dataset
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 1 dataset
Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap
GABPA 1 dataset
Motif DE_24h DE_24h-GABPA_MA0062.4 10 bp overlap
GATA2 3 datasets
ChIP SKH1 GSE87283.GATA2.SKH1 217 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 164 bp overlap
ChIP TSU-1621MT GSE60477.GATA2.TSU-1621MT 323 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 365 bp overlap
ChIP DE DE-GATA4-2 365 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 365 bp overlap
ChIP DE DE-GATA6-2 365 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 365 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 365 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 365 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 365 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 365 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 365 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 365 bp overlap
ChIP foregut GSE117136.GATA6.foregut 312 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 365 bp overlap
GLI2 1 dataset
ChIP HEK293 ENCFF700EUN 72 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 159 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 365 bp overlap
GRHL2 1 dataset
ChIP T-47D GSE99680.GRHL2.T-47D 90 bp overlap
Hnf1A 1 dataset
Motif DE_24h DE_24h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 2 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 185 bp overlap
Ikzf3 1 dataset
Motif DE_24h DE_24h-Ikzf3_MA1992.2 9 bp overlap
JMJD1C 1 dataset
ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 255 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 365 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 365 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 365 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 365 bp overlap
KDM1A 1 dataset
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 181 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 232 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 182 bp overlap
LEF1 2 datasets
ChIP K-562 ENCSR832OGB.LEF1.K-562 218 bp overlap
ChIP K562 ENCFF889WGL 349 bp overlap
LMO2 2 datasets
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 166 bp overlap
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 365 bp overlap
LYL1 1 dataset
ChIP TSU-1621MT GSE60477.LYL1.TSU-1621MT 260 bp overlap
Lef1 1 dataset
Motif DE_24h DE_24h-Lef1_MA0768.3 8 bp overlap
MAF::NFE2 1 dataset
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
MAFG::NFE2L1 1 dataset
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 1 dataset
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
MSC 1 dataset
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 338 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 334 bp overlap
NCOR2 2 datasets
ChIP AML GSE131939.NCOR2.AML 149 bp overlap
ChIP AML_shaml1-eto GSE131939.NCOR2.AML_shaml1-eto 207 bp overlap
NR4A1 1 dataset
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 134 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 221 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 365 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 260 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 75 bp overlap
PKNOX1 1 dataset
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 309 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 346 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 63 bp overlap
RNF2 2 datasets
ChIP ME-1_Con GSE128771.RNF2.ME-1_Con 307 bp overlap
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 206 bp overlap
RUNX1 7 datasets
ChIP Kasumi-1 GSE65427.RUNX1.Kasumi-1 129 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 315 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 295 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 276 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 276 bp overlap
ChIP ME-1_Human-leukemia_AI-10-49 GSE101789.RUNX1.ME-1_Human-leukemia_AI-10-49 196 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 295 bp overlap
RUNX1T1 3 datasets
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 275 bp overlap
ChIP Kasumi-1_shControl-AE GSE115115.RUNX1T1.Kasumi-1_shControl-AE 257 bp overlap
ChIP Kasumi-1_shTAF1-AE GSE115115.RUNX1T1.Kasumi-1_shTAF1-AE 227 bp overlap
SCRT1 1 dataset
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 343 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 365 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 365 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 365 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 365 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 365 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 339 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 365 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 156 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 320 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 304 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 173 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 327 bp overlap
SPDEF 1 dataset
Motif DE_24h DE_24h-SPDEF_MA0686.2 10 bp overlap
SPI1 2 datasets
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 208 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 192 bp overlap
SPIC 1 dataset
Motif DE_24h DE_24h-SPIC_MA0687.2 13 bp overlap
Spi1 1 dataset
Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 240 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TAL1 2 datasets
ChIP ME-1 GSE46044.TAL1.ME-1 301 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 282 bp overlap
TCF12 3 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 252 bp overlap
ChIP ME-1 GSE46044.TCF12.ME-1 317 bp overlap
TCF3 2 datasets
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 230 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TCF7 2 datasets
Motif DE_24h DE_24h-TCF7_MA0769.3 7 bp overlap
ChIP K-562 ENCSR863KUB.TCF7.K-562 118 bp overlap
TCF7L1 1 dataset
Motif DE_24h DE_24h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 3 datasets
Motif DE_24h DE_24h-TCF7L2_MA0523.2 9 bp overlap
ChIP HEK293 ENCFF513JQN 365 bp overlap
ChIP Panc1 ENCFF829HHL 365 bp overlap
TFAP2A 1 dataset
Motif DE_24h DE_24h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 1 dataset
Motif DE_24h DE_24h-TFAP2C_MA0814.3 9 bp overlap
TFAP4::ETV1 1 dataset
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
ZBTB11 1 dataset
Motif DE_24h DE_24h-ZBTB11_MA2329.1 9 bp overlap
ZBTB16 1 dataset
ChIP KG-1_shEZH2 GSE109619.ZBTB16.KG-1_shEZH2 253 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 260 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZBTB7A 2 datasets
Motif DE_24h DE_24h-ZBTB7A_MA0750.3 9 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 271 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 145 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 176 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF175 1 dataset
Motif DE_24h DE_24h-ZNF175_MA2332.1 9 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 72 bp overlap
ZNF264 1 dataset
ChIP HEK293 GSE76494.ZNF264.HEK293 258 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 365 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 292 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 152 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 243 bp overlap
ZNF561 1 dataset
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 201 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCFF096ELQ 61 bp overlap
Zbtb2 1 dataset
Motif DE_24h DE_24h-Zbtb2_MA2340.1 10 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap
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