chr2 : 12,754,703 – 12,755,115

412 bp 102 TFs 0 linked genes

This 412 bp open chromatin element has no linked target genes and is bound by 102 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

102 transcription factors

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 204 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 174 bp overlap

BRD4 1 dataset

ChIP hESC GSE33281.BRD4.hESC 61 bp overlap

CHD2 1 dataset

ChIP WA01 ENCSR000EBT.CHD2.WA01 259 bp overlap

CHD7 2 datasets

ChIP WA01 ENCSR000AVA.CHD7.WA01 113 bp overlap

ChIP WA01 ENCSR000AVA.CHD7.WA01 155 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 363 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 209 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF364PUR 258 bp overlap

EBF1 2 datasets

Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap

Motif ES_0h ES_0h-EBF1_MA0154.5 11 bp overlap

EHF 1 dataset

Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

ELF3 1 dataset

Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 125 bp overlap

ESR1 1 dataset

ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 204 bp overlap

ETV6 1 dataset

ChIP WTC11 ENCFF812SCD 354 bp overlap

ETV7 1 dataset

Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap

Ebf4 2 datasets

Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap

Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap

Elf5 1 dataset

Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap

Erg 1 dataset

Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 189 bp overlap

GABPA 1 dataset

Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap

GATA2 1 dataset

ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap

IKZF1 1 dataset

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

IRF2 1 dataset

ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 171 bp overlap

Ikzf3 1 dataset

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

JUN 2 datasets

ChIP ESC S24-ESC-d0-JUN-exp1 377 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 326 bp overlap

KLF13 2 datasets

Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap

Motif ES_0h ES_0h-KLF13_MA0657.2 17 bp overlap

KLF7 2 datasets

Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap

Motif ES_0h ES_0h-KLF7_MA1959.2 8 bp overlap

MAFF 1 dataset

Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MGA 2 datasets

Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap

Motif ES_0h ES_0h-MGA_MA0801.1 8 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 412 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 342 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 171 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 207 bp overlap

NFKB1 1 dataset

ChIP HEK293T GSE129618.NFKB1.HEK293T 215 bp overlap

NR2F2 2 datasets

ChIP liver ENCFF565JGD 284 bp overlap

ChIP liver ENCSR168SMX.NR2F2.liver 355 bp overlap

PAX1 1 dataset

Motif DE_12h DE_12h-PAX1_MA0779.2 16 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 166 bp overlap

PAX9 1 dataset

Motif DE_12h DE_12h-PAX9_MA0781.2 16 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU5F1 12 datasets

ChIP BG03 GSE21614.POU5F1.BG03 239 bp overlap

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 412 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 408 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 264 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 221 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 228 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 128 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 345 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 412 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 284 bp overlap

ChIP hiPSC GSE149017.POU5F1.hiPSC 222 bp overlap

PRDM9 2 datasets

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Prdm15 2 datasets

Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap

Motif ES_0h ES_0h-Prdm15_MA1616.2 11 bp overlap

RARA::RXRA 2 datasets

Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap

Motif ES_0h ES_0h-RARARXRA_MA0159.1 17 bp overlap

RBM39 1 dataset

ChIP K-562 GSE120104.RBM39.K-562 149 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SIX1 2 datasets

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap

SIX2 5 datasets

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

Motif ES_0h ES_0h-SIX2_MA1119.2 11 bp overlap

ChIP HEK GSE73865.SIX2.HEK 299 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 206 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 303 bp overlap

SIX4 1 dataset

ChIP WTC11 ENCFF891HYW 358 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 198 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 178 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 287 bp overlap

SMARCC1 1 dataset

ChIP hiPSC GSE124903.SMARCC1.hiPSC 203 bp overlap

SMC1A 1 dataset

ChIP LCL GSE38395.SMC1A.LCL 98 bp overlap

SNAI2 1 dataset

ChIP RD GSE137168.SNAI2.RD 298 bp overlap

SOX13 1 dataset

Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap

SOX2 5 datasets

Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap

ChIP H9 GSE46837.SOX2.H9 205 bp overlap

ChIP hESC GSE69479.SOX2.hESC 265 bp overlap

ChIP hESC GSE18292.SOX2.hESC 97 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 340 bp overlap

SOX4 1 dataset

Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap

SOX8 1 dataset

Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap

SOX9 1 dataset

Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap

SP1 1 dataset

ChIP WTC11 ENCFF688PEU 412 bp overlap

SP4 2 datasets

Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap

Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap

SP5 2 datasets

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

SPIB 2 datasets

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

SRY 1 dataset

Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap

STAT1 1 dataset

Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap

STAT3 2 datasets

Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap

ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 269 bp overlap

Sox17 1 dataset

Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap

Sox3 1 dataset

Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap

Sox5 1 dataset

Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap

Sox6 1 dataset

Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap

Sox7 1 dataset

Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Stat4 1 dataset

Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap

Stat5a 1 dataset

Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap

Stat5a::Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap

Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap

TBX1 2 datasets

Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap

Motif ES_0h ES_0h-TBX1_MA0805.1 8 bp overlap

TBX15 2 datasets

Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap

Motif ES_0h ES_0h-TBX15_MA0803.1 8 bp overlap

TBX18 2 datasets

Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap

Motif ES_0h ES_0h-TBX18_MA1565.2 9 bp overlap

TBX4 2 datasets

Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap

Motif ES_0h ES_0h-TBX4_MA0806.1 8 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 297 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 259 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap

ZFP14 2 datasets

Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap

Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap

ZKSCAN3 1 dataset

Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap

ZNF114 1 dataset

ChIP GM23338 ENCFF631OSW 340 bp overlap

ZNF143 1 dataset

ChIP WA01 ENCSR000EBW.ZNF143.WA01 149 bp overlap

ZNF175 1 dataset

Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap

ZNF213 2 datasets

Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap

Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap

ZNF263 2 datasets

Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap

Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap

ZNF320 2 datasets

Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap

Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 317 bp overlap

ZNF460 2 datasets

Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap

Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 341 bp overlap

ZNF530 2 datasets

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap

ZNF574 2 datasets

Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap

Motif ES_0h ES_0h-ZNF574_MA1982.2 14 bp overlap

ZNF675 2 datasets

Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap

Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap

ZNF682 2 datasets

Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap

Motif ES_0h ES_0h-ZNF682_MA1599.2 11 bp overlap

ZNF85 2 datasets

Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap

Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap