chr17 : 34,798,552 34,799,335
783 bp 89 TFs 4 linked genes
This 783 bp open chromatin element is linked to 4 target genes and is bound by 89 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
ZNF830 162.7 kb Distal Multiome
LIG3 181.6 kb Distal Multiome
CCT6B 182.2 kb Distal Multiome
RFFL 290.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:34,793,552 – 34,804,335
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
89 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 291 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 206 bp overlap
Arid3a 1 dataset
Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap
BCL6 2 datasets
Motif DE_36h DE_36h-BCL6_MA0463.3 13 bp overlap
Motif DE_60h DE_60h-BCL6_MA0463.3 13 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 415 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 303 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 341 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 223 bp overlap
BRD4 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 121 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 321 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 220 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 334 bp overlap
DUX4 2 datasets
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EBF1 2 datasets
Motif DE_60h DE_60h-EBF1_MA0154.5 11 bp overlap
Motif DE_72h DE_72h-EBF1_MA0154.5 11 bp overlap
EBF3 2 datasets
Motif DE_60h DE_60h-EBF3_MA1637.2 9 bp overlap
Motif DE_72h DE_72h-EBF3_MA1637.2 9 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 580 bp overlap
ChIP hESC GSE26097.EOMES.hESC 111 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 294 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 252 bp overlap
Ebf4 2 datasets
Motif DE_60h DE_60h-Ebf4_MA2122.1 11 bp overlap
Motif DE_72h DE_72h-Ebf4_MA2122.1 11 bp overlap
Elf5 1 dataset
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 783 bp overlap
ChIP DE DE-FOXA2-2 783 bp overlap
FOXD2 2 datasets
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
Motif DE_72h DE_72h-FOXD2_MA0847.4 11 bp overlap
FOXE1 2 datasets
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXO1::FLI1 2 datasets
Motif DE_60h DE_60h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif DE_72h DE_72h-FOXO1FLI1_MA1956.2 13 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 215 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 783 bp overlap
ChIP DE DE-GATA4-2 783 bp overlap
ChIP foregut GSE117136.GATA4.foregut 505 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 783 bp overlap
ChIP DE DE-GATA6-2 783 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 537 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 523 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 615 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 677 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 783 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 621 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 503 bp overlap
ChIP foregut GSE117136.GATA6.foregut 322 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 271 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 457 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 410 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 437 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 197 bp overlap
HIC2 2 datasets
Motif DE_60h DE_60h-HIC2_MA0738.2 6 bp overlap
Motif DE_72h DE_72h-HIC2_MA0738.2 6 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
Irf1 2 datasets
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
Motif DE_72h DE_72h-Irf1_MA0050.4 11 bp overlap
JARID2 1 dataset
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 275 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 292 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 508 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 549 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 411 bp overlap
Lhx3 1 dataset
Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 207 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 553 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 520 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 399 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 753 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 547 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 482 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
ChIP hESC GSE20650.NANOG.hESC 393 bp overlap
ChIP hESC GSE18292.NANOG.hESC 137 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 278 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 336 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 365 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 346 bp overlap
Nr2f6 2 datasets
Motif DE_60h DE_60h-Nr2f6_MA0677.2 13 bp overlap
Motif DE_72h DE_72h-Nr2f6_MA0677.2 13 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 430 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 335 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 452 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 371 bp overlap
PPARD 2 datasets
Motif DE_60h DE_60h-PPARD_MA1550.2 14 bp overlap
Motif DE_72h DE_72h-PPARD_MA1550.2 14 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 241 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 445 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 375 bp overlap
RBPJ 2 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
REST 10 datasets
ChIP GM23338 ENCFF024TCL 265 bp overlap
ChIP H1 ENCFF429RUE 245 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 448 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 138 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 214 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 151 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 369 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 315 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 242 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 451 bp overlap
RXRB 2 datasets
Motif DE_60h DE_60h-RXRB_MA0855.1 14 bp overlap
Motif DE_72h DE_72h-RXRB_MA0855.1 14 bp overlap
RXRG 2 datasets
Motif DE_60h DE_60h-RXRG_MA0856.1 14 bp overlap
Motif DE_72h DE_72h-RXRG_MA0856.1 14 bp overlap
Rxra 2 datasets
Motif DE_60h DE_60h-Rxra_MA0512.2 14 bp overlap
Motif DE_72h DE_72h-Rxra_MA0512.2 14 bp overlap
SMAD2 4 datasets
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 435 bp overlap
ChIP hESC GSE29422.SMAD2.hESC 245 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 595 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 646 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 552 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 501 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 556 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 554 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 687 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 640 bp overlap
SMAD3 4 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 404 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 429 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 362 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 359 bp overlap
SMAD4 2 datasets
ChIP endoderm GSE29422.SMAD4.endoderm 454 bp overlap
ChIP hESC GSE29422.SMAD4.hESC 175 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 650 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 395 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 629 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 353 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 569 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 423 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 564 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 570 bp overlap
SOX2 2 datasets
ChIP H9 GSE46837.SOX2.H9 415 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 496 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 282 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 189 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 194 bp overlap
STAT1::STAT2 2 datasets
Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_72h DE_72h-STAT1STAT2_MA0517.2 13 bp overlap
Sox1 2 datasets
Motif DE_60h DE_60h-Sox1_MA0870.1 15 bp overlap
Motif DE_72h DE_72h-Sox1_MA0870.1 15 bp overlap
Stat2 2 datasets
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
Stat5b 2 datasets
Motif DE_36h DE_36h-Stat5b_MA1625.2 9 bp overlap
Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 474 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 343 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 337 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 116 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 280 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 188 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 302 bp overlap
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 204 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 520 bp overlap
ZIC4 2 datasets
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
Motif DE_72h DE_72h-ZIC4_MA0751.2 14 bp overlap
ZIM3 2 datasets
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap
ZNF213 1 dataset
Motif DE_72h DE_72h-ZNF213_MA2121.1 12 bp overlap
ZNF263 3 datasets
ChIP HEK293 ENCFF336CWQ 591 bp overlap
ChIP WTC11 ENCFF893RTM 437 bp overlap
ChIP WTC11 ENCFF893RTM 359 bp overlap
ZNF398 2 datasets
ChIP BG01V GSE133630.ZNF398.BG01V 212 bp overlap
ChIP H9 GSE133630.ZNF398.H9 197 bp overlap
ZNF416 2 datasets
Motif DE_36h DE_36h-ZNF416_MA1979.2 10 bp overlap
Motif DE_60h DE_60h-ZNF416_MA1979.2 10 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF460 2 datasets
Motif DE_36h DE_36h-ZNF460_MA1596.1 16 bp overlap
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 453 bp overlap
ZNF496 1 dataset
ChIP HEK293T GSE78099.ZNF496.HEK293T 294 bp overlap
ZNF574 2 datasets
Motif DE_36h DE_36h-ZNF574_MA1982.2 14 bp overlap
Motif DE_60h DE_60h-ZNF574_MA1982.2 14 bp overlap
ZNF652 1 dataset
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
ZNF675 2 datasets
Motif DE_60h DE_60h-ZNF675_MA1714.2 19 bp overlap
Motif DE_72h DE_72h-ZNF675_MA1714.2 19 bp overlap
ZNF766 2 datasets
Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap
Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap
Znf423 2 datasets
Motif DE_60h DE_60h-Znf423_MA0116.1 15 bp overlap
Motif DE_72h DE_72h-Znf423_MA0116.1 15 bp overlap