chr14 : 66,009,018 66,009,460
442 bp 75 TFs 1 linked gene
This 442 bp open chromatin element is linked to YBX1P1 and is bound by 75 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
YBX1P1 4.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:66,004,018 – 66,014,460
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 133 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 252 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 190 bp overlap
BRD4 3 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 377 bp overlap
ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 174 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 285 bp overlap
CBX3 1 dataset
ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 123 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 145 bp overlap
CEBPA 7 datasets
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 211 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 346 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 411 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 376 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 339 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 349 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 317 bp overlap
CEBPB 5 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 244 bp overlap
ChIP THP-1_NS1-Pam3csk-0h GSE103477.CEBPB.THP-1_NS1-Pam3csk-0h 204 bp overlap
ChIP THP-1_NS1-Pam3csk-4h GSE103477.CEBPB.THP-1_NS1-Pam3csk-4h 184 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 312 bp overlap
ChIP hMSC GSE68864.CEBPB.hMSC 333 bp overlap
CEBPG 2 datasets
ChIP MCF-7 ENCFF155HZI 412 bp overlap
ChIP MCF-7 ENCFF155HZI 341 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 369 bp overlap
CRY2 1 dataset
ChIP U2OS GSE130602.CRY2.U2OS 207 bp overlap
CTCF 5 datasets
ChIP HAP1 GSE152721.CTCF.HAP1 179 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 164 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 77 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 186 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 254 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 63 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 261 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 162 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 302 bp overlap
FOS 5 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 347 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 236 bp overlap
ChIP MCF-7 ENCFF282FWZ 278 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 343 bp overlap
ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 69 bp overlap
FOSL1 3 datasets
ChIP BT-549 GSE46166.FOSL1.BT-549 442 bp overlap
ChIP BT-549 GSE112961.FOSL1.BT-549 274 bp overlap
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 150 bp overlap
FOSL2 6 datasets
ChIP LPS141 GSE111253.FOSL2.LPS141 186 bp overlap
ChIP MCF-7 ENCFF188KBZ 442 bp overlap
ChIP MCF-7 ENCFF716UWP 291 bp overlap
ChIP MCF-7 ENCSR546KCN.FOSL2.MCF-7 324 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 167 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 334 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 322 bp overlap
FOXL2 1 dataset
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 251 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 149 bp overlap
FOXP2 1 dataset
ChIP SK-N-MC ENCFF865YOS 285 bp overlap
GATA2 5 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 169 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 169 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 200 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 438 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 203 bp overlap
GATA3 4 datasets
ChIP MCF-7 ENCFF352QVM 380 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 268 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 252 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 182 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 435 bp overlap
ChIP DE DE-GATA4-2 442 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 405 bp overlap
ChIP DE DE-GATA6-2 442 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 441 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 286 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 277 bp overlap
HIF1A 1 dataset
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 290 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 164 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 299 bp overlap
JUN 10 datasets
ChIP 786-O GSE86092.JUN.786-O 203 bp overlap
ChIP BT-549 GSE46166.JUN.BT-549 429 bp overlap
ChIP BT-549 GSE71976.JUN.BT-549 280 bp overlap
ChIP BT-549_TNF GSE71976.JUN.BT-549_TNF 238 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 358 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 442 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 428 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 411 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 312 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 273 bp overlap
JUNB 1 dataset
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 198 bp overlap
JUND 3 datasets
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 129 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 123 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 127 bp overlap
KMT2B 1 dataset
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 326 bp overlap
MAFF 1 dataset
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 140 bp overlap
MAFK 2 datasets
ChIP A549 ENCFF371EPR 360 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 152 bp overlap
MED12 1 dataset
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 127 bp overlap
MGA 1 dataset
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 287 bp overlap
MRTFA 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFA.A-673-clone-Asp114 281 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 348 bp overlap
MYB 1 dataset
ChIP THP-1 GSE90769.MYB.THP-1 217 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 123 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 391 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 247 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 191 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 123 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 227 bp overlap
PGR 1 dataset
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 161 bp overlap
POLR2A 2 datasets
ChIP SK-N-MC ENCFF088IVG 411 bp overlap
ChIP vagina ENCFF305NWS 380 bp overlap
RAD21 5 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 231 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 106 bp overlap
ChIP THP-1_PMA_IFNb-0h GSE103477.RAD21.THP-1_PMA_IFNb-0h 191 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 229 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 172 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 157 bp overlap
ChIP neural cell ENCFF882LXX 333 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 363 bp overlap
RUNX1 1 dataset
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 156 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 442 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 276 bp overlap
SMAD3 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 206 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 262 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 410 bp overlap
SMARCA4 21 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 171 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 63 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 82 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 126 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 77 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 98 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 142 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 251 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 275 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 162 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 167 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 234 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 212 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 215 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 320 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 442 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 368 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 363 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 241 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCA4.TTC-549_Dox 190 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 259 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 249 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCB1.TTC-1240_delC 211 bp overlap
SMARCC1 9 datasets
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 442 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 394 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 219 bp overlap
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 344 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 364 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 202 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 219 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 407 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 260 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 415 bp overlap
SOX2 1 dataset
ChIP KYSE-70 GSE46837.SOX2.KYSE-70 150 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 200 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 261 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 235 bp overlap
STAT3 3 datasets
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 228 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.STAT3.MCF10A-Er-Src_EtOH 172 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 147 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 244 bp overlap
TEAD1 3 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 160 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 303 bp overlap
ChIP adipocyte GSE140782.TEAD1.adipocyte 415 bp overlap
TEAD4 5 datasets
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 163 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 442 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 413 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 396 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 246 bp overlap
TFAP4 1 dataset
ChIP Kasumi-1 GSE45738.TFAP4.Kasumi-1 287 bp overlap
TP53 1 dataset
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 173 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 442 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 273 bp overlap
ZEB1 1 dataset
ChIP NCI-H1975_resistant GSE106896.ZEB1.NCI-H1975_resistant 219 bp overlap
ZIC2 1 dataset
ChIP HCT-116_WT GSE127960.ZIC2.HCT-116_WT 301 bp overlap
ZIC5 1 dataset
ChIP HCT-116_WT-FL290 GSE127960.ZIC5.HCT-116_WT-FL290 197 bp overlap