chr12 : 94,186,964 – 94,187,189
225 bp 91 TFs 1 linked gene
This 225 bp open chromatin element is linked to ENSG00000258035 and is bound by 91 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000258035 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:94,181,964 – 94,192,189
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
AR 2 datasets
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 173 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 200 bp overlap
ATF1 1 dataset
ChIP HCT-116 GSE130477.ATF1.HCT-116 225 bp overlap
ATRX 2 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 225 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 225 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 225 bp overlap
BMI1 2 datasets
ChIP GM12878 ENCSR469WII.BMI1.GM12878 159 bp overlap
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 225 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 189 bp overlap
BRD4 18 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 154 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 148 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 88 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 123 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 51 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 225 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 182 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 216 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 189 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 225 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 212 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 225 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 225 bp overlap
ChIP hESC GSE33281.BRD4.hESC 73 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 176 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 225 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 53 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 116 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 147 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 191 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 192 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 169 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 194 bp overlap
COMMD3-BMI1,BMI1 2 datasets
ChIP MCF-7 ENCFF570JPP 225 bp overlap
ChIP MCF-7 ENCFF570JPP 70 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 170 bp overlap
CTCF 7 datasets
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 225 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 225 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 136 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 139 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 172 bp overlap
ChIP islet ERP004003.CTCF.islet 153 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 216 bp overlap
E2F1 2 datasets
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 166 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 185 bp overlap
E2F8 1 dataset
Motif ES_0h ES_0h-E2F8_MA0865.3 9 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 134 bp overlap
EP300 4 datasets
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 114 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 225 bp overlap
ChIP neural cell ENCFF442QNK 225 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 225 bp overlap
ERG 1 dataset
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 210 bp overlap
ESR1 1 dataset
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 182 bp overlap
EWSR1-FLI1 1 dataset
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 3 datasets
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 225 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 225 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 111 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 123 bp overlap
GABPA 1 dataset
ChIP RWPE-1 GSE29808.GABPA.RWPE-1 225 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCFF485YIB 195 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 185 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 70 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 121 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 199 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 147 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 225 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 209 bp overlap
JUN 1 dataset
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 175 bp overlap
KDM1A 3 datasets
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 225 bp overlap
ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 225 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 164 bp overlap
KDM5B 2 datasets
ChIP SUM159 GSE46055.KDM5B.SUM159 201 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 134 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 175 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 190 bp overlap
MBD1 1 dataset
ChIP K562 ENCFF741LIL 165 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 73 bp overlap
MXI1 6 datasets
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 142 bp overlap
ChIP SK-N-SH ENCFF746HVJ 225 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 175 bp overlap
ChIP WA01 ENCSR000EBR.MXI1.WA01 172 bp overlap
ChIP neural ENCSR934NHU.MXI1.neural 225 bp overlap
ChIP neural cell ENCFF623HQN 225 bp overlap
MYCN 4 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 225 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 179 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 224 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 225 bp overlap
NFKB1 1 dataset
Motif ES_0h ES_0h-NFKB1_MA0105.4 13 bp overlap
NFYB 1 dataset
ChIP WTC11 ENCFF751ZTQ 225 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 225 bp overlap
OLIG2 2 datasets
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 165 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 128 bp overlap
PAX5 1 dataset
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 139 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 225 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 221 bp overlap
POLR2A 3 datasets
ChIP neural cell ENCFF604SPB 225 bp overlap
ChIP spleen ENCFF706IUS 192 bp overlap
ChIP vagina ENCFF384GAB 225 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 163 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
PRPF4 1 dataset
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 143 bp overlap
Prdm5 2 datasets
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RAD21 5 datasets
ChIP SK-N-SH ENCFF747MAS 159 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 164 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 125 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 225 bp overlap
ChIP neural cell ENCFF564MOT 185 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 172 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 183 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 156 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 225 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 225 bp overlap
ChIP neural cell ENCFF882LXX 225 bp overlap
RFX1 11 datasets
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
Motif ES_0h ES_0h-RFX1_MA0509.3 16 bp overlap
ChIP HepG2 ENCFF144SCF 225 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 225 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 225 bp overlap
ChIP K562 ENCFF421AVO 225 bp overlap
ChIP K562 ENCFF809XVG 225 bp overlap
ChIP MCF-7 ENCFF782EZS 208 bp overlap
ChIP MCF-7 ENCFF973QAD 225 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 225 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 225 bp overlap
RFX2 2 datasets
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
Motif ES_0h ES_0h-RFX2_MA0600.3 14 bp overlap
RFX3 2 datasets
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
Motif ES_0h ES_0h-RFX3_MA0798.3 16 bp overlap
RFX5 4 datasets
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
Motif ES_0h ES_0h-RFX5_MA0510.3 14 bp overlap
ChIP SK-N-SH ENCFF755HLO 209 bp overlap
ChIP SK-N-SH ENCSR000EHY.RFX5.SK-N-SH 203 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 225 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 123 bp overlap
Rfx6 2 datasets
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Motif ES_0h ES_0h-Rfx6_MA1724.2 9 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 74 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 191 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 148 bp overlap
SMARCA4 5 datasets
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 188 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 204 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 225 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 185 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 225 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 225 bp overlap
ChIP neural cell ENCFF795YGY 134 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 178 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 103 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 225 bp overlap
Stat2 1 dataset
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
TAF1 2 datasets
ChIP neural ENCSR000BTX.TAF1.neural 225 bp overlap
ChIP neural cell ENCFF468SPD 225 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 121 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 190 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 190 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 196 bp overlap
YY1 5 datasets
ChIP H1 ENCFF524BTL 225 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 108 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 225 bp overlap
ChIP SK-N-SH ENCSR000BSM.YY1.SK-N-SH 144 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 203 bp overlap
YY2 1 dataset
Motif ES_0h ES_0h-YY2_MA0748.3 7 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 155 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 225 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 158 bp overlap
ZKSCAN5 2 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif ES_0h ES_0h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF213 1 dataset
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF257 2 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF528 1 dataset
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF610 1 dataset
Motif ES_0h ES_0h-ZNF610_MA1713.2 10 bp overlap
ZNF692 1 dataset
Motif ES_0h ES_0h-ZNF692_MA1986.2 8 bp overlap
ZNF701 1 dataset
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Zfx 1 dataset
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
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