chr11 : 128,525,910 128,526,290
380 bp 112 TFs 2 linked genes
This 380 bp open chromatin element is linked to ETS1-AS1 and MIR6090 and is bound by 112 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ETS1-AS1 at TSS At TSS Proximity
MIR6090 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:128,520,910 – 128,531,290
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
112 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 107 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 51 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 148 bp overlap
BATF 1 dataset
ChIP CD4_T-cell_d1_anti-BATF GSE108600.BATF.CD4_T-cell_d1_anti-BATF 76 bp overlap
BATF_GFP 1 dataset
ChIP CD4_T-cell_d1_GFP-BATF_anti-GFP GSE108600.BATF_GFP.CD4_T-cell_d1_GFP-BATF_anti-GFP 61 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 89 bp overlap
BRD4 11 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 191 bp overlap
ChIP CHL-1 GSE95585.BRD4.CHL-1 105 bp overlap
ChIP DND41 GSE54379.BRD4.DND41 122 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 166 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 75 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 177 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 205 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 194 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 56 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 171 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 163 bp overlap
CDK7 1 dataset
ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 194 bp overlap
CDX2 1 dataset
Motif DE_48h DE_48h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_48h DE_48h-CDX4_MA1473.2 9 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 121 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 102 bp overlap
E2F6 1 dataset
Motif DE_48h DE_48h-E2F6_MA0471.3 8 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 330 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 271 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 88 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 142 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 258 bp overlap
FOXA2 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 128 bp overlap
FOXC2 1 dataset
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
FOXD3 1 dataset
Motif DE_48h DE_48h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
FOXF2 1 dataset
Motif DE_48h DE_48h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_48h DE_48h-FOXG1_MA0613.1 8 bp overlap
FOXH1 1 dataset
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
FOXK1 1 dataset
Motif DE_48h DE_48h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_48h DE_48h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_48h DE_48h-FOXL1_MA0033.2 7 bp overlap
FOXM1 1 dataset
ChIP MDA-MB-231_THIOS GSE40762.FOXM1.MDA-MB-231_THIOS 153 bp overlap
FOXN3 2 datasets
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_48h DE_48h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_48h DE_48h-FOXO6_MA0849.1 7 bp overlap
FOXP2 1 dataset
Motif DE_48h DE_48h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_48h DE_48h-FOXP3_MA0850.1 7 bp overlap
Foxf1 1 dataset
Motif DE_48h DE_48h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_48h DE_48h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_48h DE_48h-Foxj3_MA0851.2 9 bp overlap
Foxo1 1 dataset
Motif DE_48h DE_48h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_48h DE_48h-Foxo3_MA0157.4 7 bp overlap
Foxq1 2 datasets
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
GATA2 1 dataset
ChIP SK-N-SH ENCFF764OZD 227 bp overlap
GCM1 1 dataset
Motif DE_48h DE_48h-GCM1_MA0646.2 10 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 205 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 70 bp overlap
Hoxa13 1 dataset
Motif DE_48h DE_48h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif DE_48h DE_48h-Hoxd13_MA0909.4 7 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 167 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 160 bp overlap
ChIP GM12878 ENCFF918AID 184 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 87 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 68 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 161 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 103 bp overlap
Irf1 1 dataset
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
JUN 2 datasets
ChIP Karpas-299 GSE151413.JUN.Karpas-299 136 bp overlap
ChIP T-cell GSE136853.JUN.T-cell 348 bp overlap
JUNB 2 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 119 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 148 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 115 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 109 bp overlap
MAF 2 datasets
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 240 bp overlap
ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 147 bp overlap
MEF2A 1 dataset
ChIP SK-N-SH ENCFF053MLP 166 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 93 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 88 bp overlap
MYB 4 datasets
ChIP CD4_TH2 GSE72266.MYB.CD4_TH2 62 bp overlap
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 245 bp overlap
ChIP DU528 GSE94000.MYB.DU528 79 bp overlap
ChIP U-937_vehicle-treated_MYB GSE98006.MYB.U-937_vehicle-treated_MYB 160 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 218 bp overlap
ChIP hESC GSE18292.NANOG.hESC 99 bp overlap
NBN 1 dataset
ChIP GM12878 ENCFF213ZNN 167 bp overlap
NFYA 1 dataset
Motif DE_48h DE_48h-NFYA_MA0060.4 8 bp overlap
NFYB 1 dataset
Motif DE_48h DE_48h-NFYB_MA0502.3 9 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 186 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 290 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 109 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 159 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 76 bp overlap
POLR2A 3 datasets
ChIP PFSK-1 ENCFF576NIT 380 bp overlap
ChIP Raji ENCFF613VGX 84 bp overlap
ChIP esophagus squamous epithelium ENCFF708IOX 77 bp overlap
Prdm4 1 dataset
Motif DE_48h DE_48h-Prdm4_MA1647.3 11 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 109 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 144 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 109 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 179 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 167 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 132 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 132 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 356 bp overlap
RXRA 1 dataset
ChIP SK-N-SH ENCFF893DLM 109 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD3 1 dataset
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 245 bp overlap
SMARCA4 4 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 97 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 143 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 69 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 173 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 160 bp overlap
SOX15 1 dataset
Motif DE_48h DE_48h-SOX15_MA1152.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 362 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 301 bp overlap
SOX18 2 datasets
Motif DE_48h DE_48h-SOX18_MA1563.2 8 bp overlap
Motif DE_48h DE_48h-SOX18_MA1563.2 8 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 180 bp overlap
SOX4 1 dataset
Motif DE_48h DE_48h-SOX4_MA0867.3 8 bp overlap
SOX8 2 datasets
Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap
Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap
SOX9 2 datasets
Motif DE_48h DE_48h-SOX9_MA0077.2 8 bp overlap
Motif DE_48h DE_48h-SOX9_MA0077.2 8 bp overlap
SRY 2 datasets
Motif DE_48h DE_48h-SRY_MA0084.2 7 bp overlap
Motif DE_48h DE_48h-SRY_MA0084.2 7 bp overlap
STAT1 1 dataset
Motif DE_48h DE_48h-STAT1_MA0137.4 9 bp overlap
STAT3 2 datasets
Motif DE_48h DE_48h-STAT3_MA0144.3 9 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 249 bp overlap
STAT5B 3 datasets
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 266 bp overlap
ChIP CD8_H9RET GSE64713.STAT5B.CD8_H9RET 237 bp overlap
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 253 bp overlap
Sox17 2 datasets
Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap
Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap
Sox5 2 datasets
Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap
Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
Sox7 2 datasets
Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap
Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap
Spz1 1 dataset
Motif DE_48h DE_48h-Spz1_MA0111.1 11 bp overlap
Stat2 1 dataset
Motif DE_48h DE_48h-Stat2_MA1623.2 10 bp overlap
Stat4 1 dataset
Motif DE_48h DE_48h-Stat4_MA0518.2 10 bp overlap
Stat5b 1 dataset
Motif DE_48h DE_48h-Stat5b_MA1625.2 9 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 143 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 147 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 192 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 97 bp overlap
TRIM22 2 datasets
ChIP GM12878 ENCFF919OMX 97 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 58 bp overlap
ZNF16 1 dataset
Motif DE_48h DE_48h-ZNF16_MA1654.2 21 bp overlap
ZNF239 1 dataset
ChIP K562 ENCFF703IKI 102 bp overlap
ZNF341 1 dataset
ChIP HIES_T-cell_anti-CD3_anti-CD28 GSE113194.ZNF341.HIES_T-cell_anti-CD3_anti-CD28 85 bp overlap
ZNF664 1 dataset
ChIP HEK293 ENCFF343XSW 72 bp overlap
ZNF677 1 dataset
Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap