chr11 : 116,457,361 116,458,220
859 bp 101 TFs 0 linked genes
This 859 bp open chromatin element has no linked target genes and is bound by 101 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:116,452,361 – 116,463,220
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
101 transcription factors
Source
Cell type
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 426 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 575 bp overlap
BRD4 15 datasets
ChIP BE2C GSE80151.BRD4.BE2C 228 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 446 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 859 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 855 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 825 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 633 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 228 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 150 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 305 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 186 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 323 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 313 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 761 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 708 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 859 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 244 bp overlap
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 277 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 192 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 269 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 342 bp overlap
CTBP1 1 dataset
ChIP HEK293T ENCFF003PDY 331 bp overlap
CTCF 3 datasets
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 444 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 374 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 261 bp overlap
Crx 4 datasets
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
Dmbx1 4 datasets
Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_48h DE_48h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 318 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 722 bp overlap
ChIP neural cell ENCFF442QNK 537 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 303 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 430 bp overlap
EZH2 3 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 342 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 252 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 347 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 441 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 303 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 261 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 277 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 444 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 582 bp overlap
ChIP DE DE-GATA4-2 720 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 208 bp overlap
ChIP foregut GSE117136.GATA4.foregut 527 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 732 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 424 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 512 bp overlap
ChIP DE DE-GATA6-2 791 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 744 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 744 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 751 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 859 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 859 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 859 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 658 bp overlap
ChIP foregut GSE117136.GATA6.foregut 600 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 661 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 562 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 617 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 315 bp overlap
GFI1 1 dataset
Motif DE_72h DE_72h-GFI1_MA0038.3 11 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 210 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 378 bp overlap
GSC 4 datasets
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 4 datasets
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 249 bp overlap
IKZF2 1 dataset
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 120 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 365 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 369 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 426 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 593 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 546 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 379 bp overlap
KLF5 4 datasets
ChIP HEK293 GSE88976.KLF5.HEK293 161 bp overlap
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 336 bp overlap
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 360 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 458 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 455 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 161 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCFF994GSG 190 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 534 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 171 bp overlap
MEF2D 1 dataset
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 358 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 290 bp overlap
ChIP K562 ENCFF320GSD 381 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 63 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 134 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 365 bp overlap
NEUROD1 4 datasets
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 218 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 351 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 541 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 443 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 329 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 271 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 220 bp overlap
OTX1 4 datasets
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 344 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 234 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 220 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 695 bp overlap
PHIP 2 datasets
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 84 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 326 bp overlap
PITX1 4 datasets
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 5 datasets
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 767 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 250 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 364 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 446 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 416 bp overlap
PRDM9 1 dataset
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
RAD21 3 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 511 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 611 bp overlap
ChIP neural cell ENCFF564MOT 335 bp overlap
REST 5 datasets
Motif DE_36h DE_36h-REST_MA0138.3 20 bp overlap
Motif DE_48h DE_48h-REST_MA0138.3 20 bp overlap
Motif DE_60h DE_60h-REST_MA0138.3 20 bp overlap
Motif DE_72h DE_72h-REST_MA0138.3 20 bp overlap
ChIP neural ENCSR000BTV.REST.neural 634 bp overlap
RHOXF1 4 datasets
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 259 bp overlap
Rhox11 1 dataset
Motif DE_72h DE_72h-Rhox11_MA0629.2 9 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 176 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 235 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 151 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 810 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 788 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 563 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 386 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 566 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 562 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 571 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 475 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 209 bp overlap
SMARCA4 3 datasets
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 468 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 317 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 175 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 315 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 132 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 573 bp overlap
ChIP neural cell ENCFF795YGY 531 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 297 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 673 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 470 bp overlap
SP1 1 dataset
Motif DE_72h DE_72h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_72h DE_72h-SP2_MA0516.3 9 bp overlap
SP4 1 dataset
Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 857 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 446 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 218 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 377 bp overlap
TAF1 3 datasets
ChIP neural ENCSR000BTX.TAF1.neural 113 bp overlap
ChIP neural cell ENCFF468SPD 283 bp overlap
ChIP neural cell ENCFF468SPD 536 bp overlap
TBX5 1 dataset
ChIP G296S_4 GSE85628.TBX5.G296S_4 488 bp overlap
TFAP2A 1 dataset
Motif DE_72h DE_72h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 1 dataset
Motif DE_72h DE_72h-TFAP2B_MA0813.1 13 bp overlap
TFAP2C 1 dataset
Motif DE_72h DE_72h-TFAP2C_MA0815.1 13 bp overlap
TFAP4 1 dataset
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 157 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 370 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 411 bp overlap
ZBTB6 4 datasets
Motif DE_36h DE_36h-ZBTB6_MA1581.2 9 bp overlap
Motif DE_48h DE_48h-ZBTB6_MA1581.2 9 bp overlap
Motif DE_60h DE_60h-ZBTB6_MA1581.2 9 bp overlap
Motif DE_72h DE_72h-ZBTB6_MA1581.2 9 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 465 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 270 bp overlap
ZIC1 1 dataset
Motif DE_72h DE_72h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 679 bp overlap
ZIC4 1 dataset
Motif DE_72h DE_72h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_72h DE_72h-ZIC5_MA1584.2 15 bp overlap
ZNF263 3 datasets
Motif DE_72h DE_72h-ZNF263_MA0528.3 7 bp overlap
ChIP HEK293 ENCFF336CWQ 317 bp overlap
ChIP HEK293T GSE78099.ZNF263.HEK293T 178 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 398 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 779 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 144 bp overlap
ZNF454 1 dataset
Motif DE_72h DE_72h-ZNF454_MA1712.2 17 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 634 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 257 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 170 bp overlap
ZNF674 1 dataset
ChIP HEK293T GSE78099.ZNF674.HEK293T 236 bp overlap
ZNF677 1 dataset
Motif DE_72h DE_72h-ZNF677_MA2101.1 12 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 859 bp overlap
ZNF740 1 dataset
Motif DE_72h DE_72h-ZNF740_MA0753.3 10 bp overlap
ZNF770 3 datasets
ChIP HEK293 ENCFF468FCG 252 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 196 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 165 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 337 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 458 bp overlap
Zic2 1 dataset
Motif DE_72h DE_72h-Zic2_MA1629.2 9 bp overlap