chr11 : 88,930,521 88,930,905
384 bp 92 TFs 0 linked genes
This 384 bp open chromatin element has no linked target genes and is bound by 92 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:88,925,521 – 88,935,905
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 325 bp overlap
ATF2 1 dataset
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 134 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 99 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap
BATF 1 dataset
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
BRD4 2 datasets
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 214 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 203 bp overlap
CBX3 1 dataset
ChIP HCT116 ENCFF947BOL 300 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 213 bp overlap
CEBPB 2 datasets
ChIP HCT116 ENCFF097OLY 384 bp overlap
ChIP HeLa-S3 ENCFF722WEG 209 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
CREBBP 2 datasets
ChIP PC-3 GSE147455.CREBBP.PC-3 118 bp overlap
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 126 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 282 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
EGR1 3 datasets
ChIP HCT-116 ENCSR000BRZ.EGR1.HCT-116 140 bp overlap
ChIP HCT116 ENCFF456NPQ 192 bp overlap
ChIP Ishikawa ENCFF550FKT 235 bp overlap
EP300 3 datasets
ChIP Ishikawa ENCFF364ZWT 313 bp overlap
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 242 bp overlap
ChIP PC-3 GSE147455.EP300.PC-3 126 bp overlap
ESR1 3 datasets
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 293 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 258 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 318 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
FOSL1 5 datasets
ChIP BT-549 GSE112961.FOSL1.BT-549 384 bp overlap
ChIP BT-549 GSE46166.FOSL1.BT-549 337 bp overlap
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 195 bp overlap
ChIP HCT116 ENCFF540ZXN 130 bp overlap
FOSL2 3 datasets
ChIP A549 ENCFF195CES 248 bp overlap
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
ChIP MCF-7 ENCFF716UWP 220 bp overlap
FOXM1 1 dataset
ChIP Ishikawa ENCFF578VDD 348 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 161 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUN 7 datasets
ChIP BT-549 GSE46166.JUN.BT-549 329 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 310 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 384 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 379 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 329 bp overlap
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 332 bp overlap
ChIP MCF-7_TamR_BD610326 GSE128445.JUN.MCF-7_TamR_BD610326 362 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 4 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
ChIP HCT116 ENCFF748ZQX 265 bp overlap
ChIP HeLa-S3 ENCFF642OHL 214 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 305 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 126 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
NFIC 1 dataset
ChIP Ishikawa ENCFF029AAD 272 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 255 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 322 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 242 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PAX6 1 dataset
Motif DE_12h DE_12h-PAX6_MA0069.1 14 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 238 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 320 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 61 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 59 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 53 bp overlap
SP1 1 dataset
ChIP HCT116 ENCFF800LBN 300 bp overlap
SRF 1 dataset
ChIP HCT116 ENCFF497JOF 320 bp overlap
STAT3 4 datasets
ChIP HCC70 GSE152203.STAT3.HCC70 148 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 310 bp overlap
ChIP HeLa-S3 ENCSR000EDC.STAT3.HeLa-S3 133 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 226 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCFF467DDW 310 bp overlap
TCF7L2 3 datasets
ChIP HeLa-S3 ENCFF673QAB 374 bp overlap
ChIP HeLa-S3 ENCFF673QAB 301 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 308 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD4 3 datasets
ChIP HCT116 ENCFF526YYD 205 bp overlap
ChIP Ishikawa ENCFF772OTG 252 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 155 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 262 bp overlap
ZBTB44 1 dataset
ChIP HEK293 ENCFF560VPN 249 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 361 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF324 1 dataset
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
ZNF449 1 dataset
ChIP HEK293 ENCFF764ZIC 352 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap