chr11 : 45,145,615 45,145,877
262 bp 80 TFs 1 linked gene
This 262 bp open chromatin element is linked to PRDM11 and is bound by 80 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PRDM11 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:45,140,615 – 45,150,877
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
AGO2 1 dataset
ChIP HepG2 ENCFF252VFI 231 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 223 bp overlap
ARID4A 2 datasets
ChIP Hep-G2 ENCSR386UBO.ARID4A.Hep-G2 230 bp overlap
ChIP HepG2 ENCFF142DIE 262 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 104 bp overlap
BCOR 2 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 126 bp overlap
ChIP K562 ENCFF343XWA 174 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 89 bp overlap
BRD4 11 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 125 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 262 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 262 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 262 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 118 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 262 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 225 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 198 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 262 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 80 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 147 bp overlap
CEBPA 1 dataset
ChIP liver ERP002306.CEBPA.liver 139 bp overlap
CEBPB 1 dataset
ChIP H1 ENCFF871PTR 191 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 256 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 133 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 205 bp overlap
CTCF 1 dataset
ChIP colon_transverse ENCSR769WKR.CTCF.colon_transverse 89 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 157 bp overlap
ChIP BLaER1 ENCFF274GAT 155 bp overlap
ESR1 2 datasets
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 198 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 262 bp overlap
EZH2 3 datasets
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 148 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 161 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 262 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 262 bp overlap
FOXK1 2 datasets
ChIP WTC11 ENCFF875IGU 262 bp overlap
ChIP WTC11 ENCFF875IGU 136 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 221 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 262 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 131 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF750ZWM 65 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 262 bp overlap
HMGXB3 1 dataset
ChIP HepG2 ENCFF161CYU 262 bp overlap
INO80 3 datasets
ChIP Hep-G2 GSE97411.INO80.Hep-G2 56 bp overlap
ChIP Hep-G2 GSE107730.INO80.Hep-G2 56 bp overlap
ChIP Huh-7 GSE97411.INO80.Huh-7 262 bp overlap
JUN 1 dataset
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 211 bp overlap
KDM1A 13 datasets
ChIP H1 ENCFF696SGD 181 bp overlap
ChIP HepG2 ENCFF240UWG 112 bp overlap
ChIP HepG2 ENCFF730KKG 233 bp overlap
ChIP HepG2 ENCFF730KKG 139 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 116 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 156 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 97 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 81 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 115 bp overlap
ChIP keratinocyte_diff GSE57702.KDM1A.keratinocyte_diff 67 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 191 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 185 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 139 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 156 bp overlap
MAX 4 datasets
ChIP H1 ENCFF601FOM 262 bp overlap
ChIP H1 ENCFF914VQY 261 bp overlap
ChIP HepG2 ENCFF507HCX 262 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 143 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 104 bp overlap
MXI1 5 datasets
ChIP H1 ENCFF963FZS 262 bp overlap
ChIP H1 ENCFF963FZS 90 bp overlap
ChIP HepG2 ENCFF493ITN 262 bp overlap
ChIP WA01 ENCSR000EBR.MXI1.WA01 249 bp overlap
ChIP neural ENCSR934NHU.MXI1.neural 188 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 148 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 245 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 142 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 57 bp overlap
NFYA 2 datasets
ChIP Hep-G2 ENCSR124APT.NFYA.Hep-G2 227 bp overlap
ChIP HepG2 ENCFF883OMO 262 bp overlap
NFYB 2 datasets
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 228 bp overlap
ChIP WTC11 ENCFF751ZTQ 262 bp overlap
NFYC 2 datasets
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 233 bp overlap
ChIP HepG2 ENCFF836FYP 262 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 171 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 130 bp overlap
POLR2A 4 datasets
ChIP H1 ENCFF833NJP 262 bp overlap
ChIP H54 ENCFF398BXN 143 bp overlap
ChIP HepG2 ENCFF718XAJ 262 bp overlap
ChIP spleen ENCFF446ZGT 225 bp overlap
POLR2G 1 dataset
ChIP HepG2 ENCFF508UTS 262 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 262 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 135 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 59 bp overlap
PTBP1 3 datasets
ChIP K-562 ENCSR948KMB.PTBP1.K-562 107 bp overlap
ChIP K-562 GSE120104.PTBP1.K-562 77 bp overlap
ChIP K562 ENCFF773HPT 180 bp overlap
RBM25 1 dataset
ChIP K-562 ENCSR791OZM.RBM25.K-562 167 bp overlap
RCOR1 2 datasets
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 73 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 97 bp overlap
REST 5 datasets
ChIP A-549 ENCSR000BQP.REST.A-549 52 bp overlap
ChIP H1 ENCFF429RUE 90 bp overlap
ChIP HEK293 ENCFF073DOT 190 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 118 bp overlap
ChIP HeLa-S3 ENCFF911DTC 94 bp overlap
RFX1 6 datasets
ChIP Hep-G2 ENCSR928API.RFX1.Hep-G2 232 bp overlap
ChIP HepG2 ENCFF144SCF 262 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 262 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 262 bp overlap
ChIP K562 ENCFF421AVO 262 bp overlap
ChIP K562 ENCFF809XVG 235 bp overlap
RFX3 2 datasets
ChIP Hep-G2 ENCSR633OVO.RFX3.Hep-G2 233 bp overlap
ChIP HepG2 ENCFF681ZHO 262 bp overlap
SAP30 2 datasets
ChIP H1 ENCFF149IOE 71 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 262 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 262 bp overlap
ChIP H1 ENCFF896IJG 262 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 262 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 236 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 233 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 262 bp overlap
SMARCC1 2 datasets
ChIP HeLa-S3 ENCFF971JGA 125 bp overlap
ChIP HeLa-S3 ENCFF971JGA 262 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 262 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 182 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFE-AID GSE144786.SUPT5H.DLD-1_NELFE-AID 106 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 262 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 158 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 60 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 82 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 262 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 224 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 114 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 143 bp overlap
YY1 6 datasets
ChIP H1 ENCFF524BTL 241 bp overlap
ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 123 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 134 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 103 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 165 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 168 bp overlap
ZC3H13 1 dataset
ChIP HepG2 ENCFF444JZJ 242 bp overlap
ZMYM3 7 datasets
ChIP Hep-G2 ENCSR848YWD.ZMYM3.Hep-G2 91 bp overlap
ChIP Hep-G2_Ab_JH39-2-2F10 GSE97661.ZMYM3.Hep-G2_Ab_JH39-2-2F10 91 bp overlap
ChIP HepG2 ENCFF408KTI 138 bp overlap
ChIP HepG2 ENCFF667RVD 145 bp overlap
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 92 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 119 bp overlap
ChIP K562 ENCFF361LXT 128 bp overlap
ZNF274 1 dataset
ChIP HepG2 ENCFF155SWH 262 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 253 bp overlap