chr11 : 5,422,688 5,423,926
1,238 bp 141 TFs 0 linked genes
This 1.2 kb open chromatin element has no linked target genes and is bound by 141 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:5,417,688 – 5,428,926
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
141 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap
AR 3 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 174 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 102 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 53 bp overlap
ARGFX 1 dataset
Motif DE_36h DE_36h-ARGFX_MA1463.2 8 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 231 bp overlap
ATF3 3 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 309 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 441 bp overlap
ChIP K562 ENCFF604FPV 505 bp overlap
Alx1 1 dataset
Motif DE_36h DE_36h-Alx1_MA0854.2 8 bp overlap
Alx4 1 dataset
Motif DE_36h DE_36h-Alx4_MA0853.2 12 bp overlap
Arx 1 dataset
Motif DE_36h DE_36h-Arx_MA0874.2 10 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 165 bp overlap
BARX2 1 dataset
Motif DE_72h DE_72h-BARX2_MA1471.2 9 bp overlap
BRD4 4 datasets
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 171 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 527 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 247 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 333 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 244 bp overlap
CREB1 2 datasets
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 279 bp overlap
ChIP HepG2 ENCFF792THT 391 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 148 bp overlap
DMRTC2 1 dataset
Motif DE_36h DE_36h-DMRTC2_MA1479.2 11 bp overlap
DRGX 1 dataset
Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap
DUXA 1 dataset
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
EMX1 1 dataset
Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap
EN2 1 dataset
Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 172 bp overlap
ChIP hESC GSE26097.EOMES.hESC 280 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 310 bp overlap
ESX1 1 dataset
Motif DE_36h DE_36h-ESX1_MA0644.3 7 bp overlap
EVX1 1 dataset
Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 400 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 321 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 397 bp overlap
FOS 6 datasets
ChIP Hep-G2 ENCSR177HDZ.FOS.Hep-G2 133 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 149 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 153 bp overlap
ChIP MCF-7 ENCFF282FWZ 147 bp overlap
ChIP MCF-7 ENCFF282FWZ 421 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 452 bp overlap
FOSL1 3 datasets
ChIP 143B GSE74230.FOSL1.143B 227 bp overlap
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 220 bp overlap
ChIP HCT116 ENCFF540ZXN 397 bp overlap
FOSL2 2 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 499 bp overlap
ChIP A549 ENCFF195CES 365 bp overlap
FOXA1 1 dataset
Motif DE_72h DE_72h-FOXA1_MA0148.5 8 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 795 bp overlap
ChIP DE DE-FOXA2-2 734 bp overlap
Motif DE_72h DE_72h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif DE_72h DE_72h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif DE_72h DE_72h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_72h DE_72h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_72h DE_72h-FOXC2_MA0846.2 11 bp overlap
FOXD1 1 dataset
Motif DE_72h DE_72h-FOXD1_MA0031.2 7 bp overlap
FOXD2 1 dataset
Motif DE_72h DE_72h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXF2 1 dataset
Motif DE_72h DE_72h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_72h DE_72h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_72h DE_72h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_72h DE_72h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_72h DE_72h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_72h DE_72h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif DE_72h DE_72h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_72h DE_72h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_72h DE_72h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_72h DE_72h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_72h DE_72h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_72h DE_72h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_72h DE_72h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_72h DE_72h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_72h DE_72h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_72h DE_72h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_72h DE_72h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_72h DE_72h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_72h DE_72h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_72h DE_72h-Foxo3_MA0157.4 7 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 1096 bp overlap
ChIP DE DE-GATA4-2 907 bp overlap
ChIP foregut GSE117136.GATA4.foregut 666 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 441 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 909 bp overlap
ChIP DE DE-GATA6-2 972 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 569 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 887 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 344 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 657 bp overlap
ChIP foregut GSE117136.GATA6.foregut 273 bp overlap
GBX1 1 dataset
Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap
GSX1 1 dataset
Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_36h DE_36h-GSX2_MA0893.3 7 bp overlap
HNF4A 1 dataset
Motif DE_48h DE_48h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_48h DE_48h-HNF4G_MA0484.3 9 bp overlap
HOXA1 1 dataset
Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap
HOXB1 1 dataset
Motif DE_36h DE_36h-HOXB1_MA2093.1 7 bp overlap
HOXB13 2 datasets
ChIP LNCaP GSE96652.HOXB13.LNCaP 186 bp overlap
ChIP LNCaP GSE56288.HOXB13.LNCaP 59 bp overlap
HOXB2 1 dataset
Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap
HOXC8 1 dataset
Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap
ISX 1 dataset
Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap
JUN 6 datasets
ChIP 786-O GSE86092.JUN.786-O 227 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 279 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 368 bp overlap
ChIP Hep-G2 ENCSR000EEK.JUN.Hep-G2 168 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 135 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 163 bp overlap
JUNB 1 dataset
ChIP CD4 GSE116695.JUNB.CD4 197 bp overlap
JUND 4 datasets
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 159 bp overlap
ChIP HepG2 ENCFF869OPW 271 bp overlap
ChIP SK-N-SH ENCFF971JKN 291 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 332 bp overlap
LBX1 1 dataset
Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap
LHX5 1 dataset
Motif DE_36h DE_36h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap
LHX9 1 dataset
Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap
LMX1A 1 dataset
Motif DE_36h DE_36h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_36h DE_36h-LMX1B_MA0703.3 8 bp overlap
Lhx1 1 dataset
Motif DE_36h DE_36h-Lhx1_MA1518.3 10 bp overlap
Lhx4 1 dataset
Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap
MEOX1 1 dataset
Motif DE_36h DE_36h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_36h DE_36h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap
NFYA 1 dataset
Motif DE_48h DE_48h-NFYA_MA0060.4 8 bp overlap
NFYC 1 dataset
Motif DE_48h DE_48h-NFYC_MA1644.2 7 bp overlap
NKX6-1 1 dataset
Motif DE_36h DE_36h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 1 dataset
Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap
NOTO 1 dataset
Motif DE_36h DE_36h-NOTO_MA0710.2 7 bp overlap
Nfatc2 1 dataset
Motif DE_48h DE_48h-Nfatc2_MA0152.3 8 bp overlap
PAX4 1 dataset
Motif DE_36h DE_36h-PAX4_MA0068.2 8 bp overlap
PAX6 1 dataset
Motif DE_48h DE_48h-PAX6_MA0069.1 14 bp overlap
PDX1 1 dataset
Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap
PHOX2A 1 dataset
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
PKNOX1 1 dataset
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF215CWW 240 bp overlap
POU3F3 1 dataset
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
POU6F1 1 dataset
Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap
POU6F2 1 dataset
Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap
PROP1 1 dataset
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
PRRX1 1 dataset
Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap
PRRX2 1 dataset
Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap
RAX2 1 dataset
Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap
REL 1 dataset
Motif DE_48h DE_48h-REL_MA0101.1 10 bp overlap
RELA 1 dataset
Motif DE_48h DE_48h-RELA_MA0107.1 10 bp overlap
RORA 2 datasets
Motif DE_36h DE_36h-RORA_MA0072.2 11 bp overlap
Motif DE_48h DE_48h-RORA_MA0071.1 10 bp overlap
RORB 2 datasets
Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap
Motif DE_72h DE_72h-RORB_MA1150.2 10 bp overlap
SHOX 1 dataset
Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 758 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 527 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 480 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 202 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 572 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 541 bp overlap
SUPT5H 6 datasets
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 384 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 395 bp overlap
ChIP HCT-116_DMSO_pSer666 GSE138548.SUPT5H.HCT-116_DMSO_pSer666 381 bp overlap
ChIP HCT-116_DMSO_pThr806 GSE138548.SUPT5H.HCT-116_DMSO_pThr806 239 bp overlap
ChIP HCT-116_DMSO_pThr806 GSE138548.SUPT5H.HCT-116_DMSO_pThr806 188 bp overlap
ChIP HCT-116_Nut3 GSE138548.SUPT5H.HCT-116_Nut3 103 bp overlap
SUPT6H 2 datasets
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 216 bp overlap
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 287 bp overlap
SUZ12 1 dataset
ChIP LNCaP GSE39459.SUZ12.LNCaP 176 bp overlap
Shox2 1 dataset
Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap
TBX2 1 dataset
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
TLX2 1 dataset
Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_36h DE_36h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_36h DE_36h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_36h DE_36h-VSX2_MA0726.2 7 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 104 bp overlap
ChIP K562 ENCFF875HLX 221 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 387 bp overlap
ZNF354A 1 dataset
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
mix-a 1 dataset
Motif DE_36h DE_36h-mix-a_MA0621.2 7 bp overlap