chr10 : 51,083,422 51,083,922
500 bp 86 TFs 1 linked gene
This 500 bp open chromatin element is linked to PRKG1 and is bound by 86 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PRKG1 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:51,078,422 – 51,088,922
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 85 bp overlap
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 500 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 434 bp overlap
BCL11A 1 dataset
Motif DE_12h DE_12h-BCL11A_MA2324.1 7 bp overlap
CDK8 3 datasets
ChIP leiomyoma_PT848 GSE128230.CDK8.leiomyoma_PT848 168 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 62 bp overlap
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 247 bp overlap
CDX1 1 dataset
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 242 bp overlap
CRY1 1 dataset
ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 305 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 240 bp overlap
CTCF 107 datasets
ChIP 22Rv1 ENCFF466OXN 500 bp overlap
ChIP AG04450 ENCFF116DJL 243 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 103 bp overlap
ChIP GM23338 ENCFF531QOI 185 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 139 bp overlap
ChIP H9 ENCFF152GTF 273 bp overlap
ChIP H9 ENCFF152GTF 169 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 150 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 147 bp overlap
ChIP HEK293 ENCFF821TIC 381 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 288 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 202 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 162 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 180 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 221 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 128 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 171 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 193 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 250 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 259 bp overlap
ChIP PC-3 ENCFF487TUI 347 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 236 bp overlap
ChIP Panc1 ENCFF056JQX 491 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 260 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 128 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 58 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 182 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 141 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 188 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 217 bp overlap
ChIP WI-38 ENCSR000DYB.CTCF.WI-38 145 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 500 bp overlap
ChIP ascending aorta ENCFF138DXQ 296 bp overlap
ChIP ascending aorta ENCFF451CCT 307 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 487 bp overlap
ChIP ascending-aorta ENCSR555DCD.CTCF.ascending-aorta 162 bp overlap
ChIP brain ENCFF163BBN 426 bp overlap
ChIP brain ENCFF163BBN 223 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 278 bp overlap
ChIP breast_epithelium ENCSR661NXJ.CTCF.breast_epithelium 280 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 252 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 173 bp overlap
ChIP chondrocyte ENCFF134ORZ 366 bp overlap
ChIP chondrocyte ENCFF134ORZ 229 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 263 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 173 bp overlap
ChIP endodermal cell ENCFF471YCZ 278 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 176 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 202 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 163 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 146 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 500 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 234 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 445 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 261 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 253 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 251 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 123 bp overlap
ChIP fibroblast_LUNG ENCSR000DVA.CTCF.fibroblast_LUNG 163 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 161 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 149 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 166 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 203 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 362 bp overlap
ChIP gastroesophageal sphincter ENCFF582GAX 210 bp overlap
ChIP gastroesophageal-sphincter ENCSR206ETG.CTCF.gastroesophageal-sphincter 500 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 472 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 367 bp overlap
ChIP gastroesophageal-sphincter ENCSR661XNQ.CTCF.gastroesophageal-sphincter 213 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 199 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 240 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 185 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 339 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 229 bp overlap
ChIP heart left ventricle ENCFF548XHH 327 bp overlap
ChIP heart right ventricle ENCFF027ORH 371 bp overlap
ChIP hepatocyte ENCFF263BLJ 229 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 193 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 296 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 224 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 118 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 134 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 200 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 215 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 174 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 155 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 227 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 264 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 421 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 383 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 157 bp overlap
ChIP neural progenitor cell ENCFF420RBO 180 bp overlap
ChIP neural progenitor cell ENCFF581WPG 467 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 286 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 131 bp overlap
ChIP parathyroid adenoma ENCFF173NJK 312 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 351 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 235 bp overlap
ChIP sigmoid colon ENCFF219LPW 401 bp overlap
ChIP thoracic aorta ENCFF166PKA 407 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 151 bp overlap
ChIP uterus ENCFF924IAA 367 bp overlap
ChIP uterus ENCSR684PGO.CTCF.uterus 188 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 251 bp overlap
DMRTA1 1 dataset
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA1 11 datasets
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 109 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 99 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 95 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 147 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 136 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 100 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 175 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 105 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 167 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 151 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 110 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 148 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 125 bp overlap
ChIP DE DE-FOXA2-2 217 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 189 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 178 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 111 bp overlap
HNF4A 2 datasets
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 219 bp overlap
HNF4G 1 dataset
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
HOXA10 1 dataset
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Hoxa13 1 dataset
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif DE_12h DE_12h-Hoxd13_MA0909.4 7 bp overlap
Isl1 1 dataset
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 328 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 301 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 310 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 323 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 398 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 389 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 323 bp overlap
JUND 2 datasets
ChIP WA01 ENCSR000BKP.JUND.WA01 123 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 131 bp overlap
MED12 4 datasets
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 86 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 96 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 130 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 134 bp overlap
MYC 1 dataset
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 161 bp overlap
MYOD1 2 datasets
ChIP RD GSE137168.MYOD1.RD 183 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 145 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 500 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 183 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 274 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 340 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 178 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 97 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
Nr2f6 1 dataset
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
PGR 3 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 487 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 326 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 181 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF566JSR 500 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 291 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 133 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 151 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 221 bp overlap
ChIP H1 ENCFF967OJF 204 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 222 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 312 bp overlap
RFX7 1 dataset
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 423 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Runx1 1 dataset
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 143 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 188 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SNAI2 2 datasets
ChIP RD GSE137168.SNAI2.RD 62 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 193 bp overlap
SNAI3 1 dataset
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SRF 3 datasets
ChIP H1 ENCFF036PEF 225 bp overlap
ChIP Ishikawa ENCSR000BTD.SRF.Ishikawa 149 bp overlap
ChIP WA01 ENCSR000BIV.SRF.WA01 236 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 182 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 451 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 448 bp overlap
TBP 3 datasets
ChIP hESC GSE122298.TBP.hESC 152 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 115 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 130 bp overlap
TCF12 1 dataset
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TEAD1 1 dataset
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 140 bp overlap
TEAD4 1 dataset
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 232 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 250 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 71 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 184 bp overlap
ZNF134 1 dataset
ChIP HEK293 GSE76494.ZNF134.HEK293 77 bp overlap
ZNF274 1 dataset
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 337 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 261 bp overlap
ZNF382 1 dataset
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
ZNF384 2 datasets
ChIP HEK293T ENCFF019DZX 310 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 260 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 51 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap