chr10 : 43,389,987 – 43,390,371
384 bp 92 TFs 1 linked gene
This 384 bp open chromatin element is linked to HNRNPF and is bound by 92 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
HNRNPF 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:43,384,987 – 43,395,371
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE63202.AR.LNCaP 150 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 254 bp overlap
ChIP K562 ENCFF938UXQ 215 bp overlap
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 265 bp overlap
BCL11A 7 datasets
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 64 bp overlap
ChIP CD34_Day9_15min GSE104676.BCL11A.CD34_Day9_15min 78 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 135 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 124 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 123 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 69 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 68 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 233 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 243 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 239 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 256 bp overlap
BRD4 5 datasets
ChIP HCC1937 GSE124748.BRD4.HCC1937 154 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 262 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 172 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 216 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 308 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 250 bp overlap
ChIP K562 ENCFF673OEZ 195 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 124 bp overlap
CEBPB 4 datasets
ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 125 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 146 bp overlap
ChIP K562 ENCFF584CTB 384 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 169 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 131 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 245 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 230 bp overlap
CTCF 1 dataset
ChIP keratinocyte GSE154221.CTCF.keratinocyte 307 bp overlap
CTNNB1 1 dataset
ChIP LS180 GSE31939.CTNNB1.LS180 144 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 273 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 190 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 212 bp overlap
ChIP K562 ENCFF775HUO 162 bp overlap
E2F5 2 datasets
ChIP K562 ENCFF688PUB 153 bp overlap
ChIP K562 ENCFF688PUB 384 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 338 bp overlap
EP300 1 dataset
ChIP K562 ENCFF226VMS 246 bp overlap
ESRRA 2 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 276 bp overlap
ChIP K562 ENCFF968PEP 384 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 384 bp overlap
GATA1 6 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 72 bp overlap
ChIP CD34_Day9_30min GSE104676.GATA1.CD34_Day9_30min 70 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 276 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 201 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 203 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 205 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000EWG.GATA2.K-562 151 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 138 bp overlap
ChIP K562 ENCFF544PCK 231 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 292 bp overlap
ChIP DE DE-GATA4-2 323 bp overlap
ChIP foregut GSE117136.GATA4.foregut 267 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 253 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 289 bp overlap
ChIP DE DE-GATA6-2 353 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 384 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 346 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 332 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 344 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 353 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 384 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 304 bp overlap
ChIP foregut GSE117136.GATA6.foregut 379 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 228 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 124 bp overlap
HDAC1 4 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 279 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 216 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 102 bp overlap
ChIP K562 ENCFF968WBH 363 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 243 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 228 bp overlap
ChIP K562 ENCFF744ALD 327 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 166 bp overlap
HDGF 2 datasets
ChIP K562 ENCFF195BET 101 bp overlap
ChIP K562 ENCFF682FBH 100 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 147 bp overlap
ChIP HepG2 ENCFF854JLR 236 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 310 bp overlap
IKZF1 4 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 362 bp overlap
ChIP K562 ENCFF348IBL 384 bp overlap
ChIP K562 ENCFF771OHZ 213 bp overlap
ChIP K562 ENCFF771OHZ 258 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 57 bp overlap
JUND 2 datasets
ChIP K562 ENCFF336RCR 328 bp overlap
ChIP K562 ENCFF336RCR 317 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 185 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 238 bp overlap
LIN54 1 dataset
ChIP HepG2 ENCFF662XDE 77 bp overlap
MAFG 3 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 384 bp overlap
ChIP K562 ENCFF455EEO 337 bp overlap
ChIP K562 ENCFF455EEO 277 bp overlap
MAFK 1 dataset
ChIP K562 ENCFF380WHM 228 bp overlap
MAX 5 datasets
ChIP HepG2 ENCFF479OHI 376 bp overlap
ChIP HepG2 ENCFF479OHI 119 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 181 bp overlap
ChIP K562 ENCFF110LJS 265 bp overlap
ChIP K562 ENCFF524IJO 152 bp overlap
MNT 3 datasets
ChIP K-562 ENCSR512NLO.MNT.K-562 224 bp overlap
ChIP K-562 ENCSR390VGH.MNT.K-562 241 bp overlap
ChIP K562 ENCFF820IGH 384 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 345 bp overlap
MYC 6 datasets
ChIP K-562 ENCSR000EGJ.MYC.K-562 144 bp overlap
ChIP K-562 ENCSR000EGS.MYC.K-562 118 bp overlap
ChIP K-562 ENCSR000FAZ.MYC.K-562 180 bp overlap
ChIP K-562 ENCSR000FAG.MYC.K-562 144 bp overlap
ChIP K-562 ENCSR000DLZ.MYC.K-562 70 bp overlap
ChIP K562 ENCFF988ZRU 284 bp overlap
NCOR1 4 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 216 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 177 bp overlap
ChIP K562 ENCFF788MPU 241 bp overlap
ChIP K562 ENCFF866HRM 279 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 228 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 66 bp overlap
NFE2L2 1 dataset
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 145 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 210 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 181 bp overlap
NR3C1 1 dataset
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 127 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 304 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 176 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 198 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 350 bp overlap
POLR2A 22 datasets
ChIP GM12878 ENCFF412KAE 384 bp overlap
ChIP GM12878 ENCFF412KAE 171 bp overlap
ChIP GM12878 ENCFF521FXC 384 bp overlap
ChIP GM12878 ENCFF521FXC 164 bp overlap
ChIP GM12891 ENCFF127ICP 216 bp overlap
ChIP GM12891 ENCFF379FCI 368 bp overlap
ChIP GM12892 ENCFF542ZFO 129 bp overlap
ChIP H1 ENCFF566JSR 384 bp overlap
ChIP H1 ENCFF833NJP 301 bp overlap
ChIP HL-60 ENCFF321XKE 331 bp overlap
ChIP HL-60 ENCFF321XKE 106 bp overlap
ChIP HeLa-S3 ENCFF224LWS 384 bp overlap
ChIP HeLa-S3 ENCFF773DNG 359 bp overlap
ChIP HepG2 ENCFF252NAR 384 bp overlap
ChIP HepG2 ENCFF252NAR 273 bp overlap
ChIP HepG2 ENCFF736SLT 180 bp overlap
ChIP K562 ENCFF215CWW 384 bp overlap
ChIP K562 ENCFF514URW 384 bp overlap
ChIP K562 ENCFF757TUO 288 bp overlap
ChIP PFSK-1 ENCFF576NIT 384 bp overlap
ChIP PFSK-1 ENCFF576NIT 151 bp overlap
ChIP Panc1 ENCFF290KAB 270 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 325 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 310 bp overlap
PTBP1 1 dataset
ChIP K-562 GSE120104.PTBP1.K-562 201 bp overlap
RBBP5 1 dataset
ChIP K562 ENCFF070CVK 384 bp overlap
RBFOX2 7 datasets
ChIP HepG2 ENCFF554DMZ 384 bp overlap
ChIP HepG2 ENCFF939HTZ 384 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 326 bp overlap
ChIP K562 ENCFF196WTG 384 bp overlap
ChIP K562 ENCFF196WTG 278 bp overlap
ChIP K562 ENCFF967GRF 170 bp overlap
ChIP K562 ENCFF967GRF 384 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 384 bp overlap
ChIP HepG2 ENCFF561IAJ 384 bp overlap
REST 2 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 183 bp overlap
ChIP K562 ENCFF430APM 218 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 232 bp overlap
RPA2_phospho 3 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 226 bp overlap
ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 186 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 198 bp overlap
SIRT6 1 dataset
ChIP K-562 ENCSR000AUB.SIRT6.K-562 286 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 197 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 284 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 361 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 219 bp overlap
SPI1 1 dataset
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 109 bp overlap
STAT5A 1 dataset
ChIP K562 ENCFF226BTJ 172 bp overlap
SUPT5H 3 datasets
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 92 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 384 bp overlap
ChIP K562 ENCFF902PAW 61 bp overlap
SUPT6H 1 dataset
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 292 bp overlap
TAL1 12 datasets
ChIP CD34 GSE52924.TAL1.CD34 122 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 249 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 332 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 171 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 215 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 193 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 202 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 218 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 226 bp overlap
ChIP K562 ENCFF620GMX 156 bp overlap
ChIP K562 ENCFF661CCK 237 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 133 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 207 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 224 bp overlap
ChIP K562 ENCFF931DJY 332 bp overlap
TCF15 1 dataset
ChIP K562 ENCFF099NVR 194 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 229 bp overlap
ChIP K562 ENCFF319QZT 302 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 270 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 377 bp overlap
THRB 1 dataset
ChIP K562 ENCFF620NFN 51 bp overlap
XRCC5 2 datasets
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 200 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 200 bp overlap
YY1 2 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 158 bp overlap
ChIP K562 ENCFF660QRE 231 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 246 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 151 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 326 bp overlap
ZNF398 1 dataset
ChIP HEK293 ENCFF184XEW 91 bp overlap
ZNF598 1 dataset
ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 233 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 131 bp overlap
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