chr1 : 185,679,108 185,679,592
484 bp 110 TFs 0 linked genes
This 484 bp open chromatin element has no linked target genes and is bound by 110 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:185,674,108 – 185,684,592
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
110 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 146 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 76 bp overlap
BRD4 1 dataset
ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 76 bp overlap
CEBPA 1 dataset
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 138 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 282 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 216 bp overlap
Crx 1 dataset
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
Dmbx1 1 dataset
Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap
E2F7 1 dataset
Motif DE_36h DE_36h-E2F7_MA0758.1 14 bp overlap
EBF1 1 dataset
Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap
EBF3 1 dataset
Motif DE_36h DE_36h-EBF3_MA1637.2 9 bp overlap
EHF 5 datasets
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
Motif DE_24h DE_24h-EHF_MA0598.4 9 bp overlap
Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap
Motif DE_48h DE_48h-EHF_MA0598.4 9 bp overlap
Motif DE_72h DE_72h-EHF_MA0598.4 9 bp overlap
ELF2 5 datasets
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
Motif DE_24h DE_24h-ELF2_MA1483.3 10 bp overlap
Motif DE_36h DE_36h-ELF2_MA1483.3 10 bp overlap
Motif DE_48h DE_48h-ELF2_MA1483.3 10 bp overlap
Motif DE_72h DE_72h-ELF2_MA1483.3 10 bp overlap
ELF3 6 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif DE_24h DE_24h-ELF3_MA0640.3 9 bp overlap
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
Motif DE_72h DE_72h-ELF3_MA0640.3 9 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 484 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 430 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 224 bp overlap
ESR1 2 datasets
Motif DE_36h DE_36h-ESR1_MA0112.4 15 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 148 bp overlap
ESR2 1 dataset
Motif DE_36h DE_36h-ESR2_MA0258.2 15 bp overlap
ESRRA 5 datasets
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
Motif DE_24h DE_24h-ESRRA_MA0592.4 9 bp overlap
Motif DE_36h DE_36h-ESRRA_MA0592.4 9 bp overlap
Motif DE_48h DE_48h-ESRRA_MA0592.4 9 bp overlap
Motif DE_72h DE_72h-ESRRA_MA0592.4 9 bp overlap
ESRRB 5 datasets
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
Motif DE_24h DE_24h-ESRRB_MA0141.4 10 bp overlap
Motif DE_36h DE_36h-ESRRB_MA0141.4 10 bp overlap
Motif DE_48h DE_48h-ESRRB_MA0141.4 10 bp overlap
Motif DE_72h DE_72h-ESRRB_MA0141.4 10 bp overlap
Ebf4 1 dataset
Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap
Elf5 6 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif DE_24h DE_24h-Elf5_MA0136.4 8 bp overlap
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Motif DE_72h DE_72h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
FLI1 4 datasets
ChIP A-673 GSE99959.FLI1.A-673 437 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 480 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 423 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 334 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 470 bp overlap
ChIP DE DE-FOXA2-2 474 bp overlap
GABPA 1 dataset
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 484 bp overlap
ChIP DE DE-GATA4-2 484 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 480 bp overlap
ChIP DE DE-GATA6-2 484 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 446 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 484 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 484 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 405 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 484 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 484 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 355 bp overlap
GSC 1 dataset
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 73 bp overlap
ChIP HepG2 ENCFF854JLR 83 bp overlap
HOXB4 1 dataset
Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap
Hnf1A 1 dataset
Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 1 dataset
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
IKZF2 6 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
IRF2 1 dataset
Motif DE_36h DE_36h-IRF2_MA0051.2 16 bp overlap
Irf1 1 dataset
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 258 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 439 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 431 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 378 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 457 bp overlap
KMT2B 1 dataset
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 263 bp overlap
Lef1 1 dataset
Motif DE_36h DE_36h-Lef1_MA0768.3 8 bp overlap
MAFF 2 datasets
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
Motif DE_48h DE_48h-MAFF_MA0495.4 11 bp overlap
MEIS1 2 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MYB 2 datasets
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 252 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 395 bp overlap
Mafb 2 datasets
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
Motif DE_48h DE_48h-Mafb_MA0117.3 11 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 242 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 346 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 313 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 153 bp overlap
NFIA 2 datasets
Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap
Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap
NFIX 2 datasets
Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap
Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap
NR1I3 5 datasets
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
Motif DE_24h DE_24h-NR1I3_MA1534.2 8 bp overlap
Motif DE_36h DE_36h-NR1I3_MA1534.2 8 bp overlap
Motif DE_48h DE_48h-NR1I3_MA1534.2 8 bp overlap
Motif DE_72h DE_72h-NR1I3_MA1534.2 8 bp overlap
NR6A1 1 dataset
Motif DE_36h DE_36h-NR6A1_MA1541.2 14 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 127 bp overlap
NRL 2 datasets
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
Motif DE_48h DE_48h-NRL_MA0842.3 12 bp overlap
Nfatc2 1 dataset
Motif DE_36h DE_36h-Nfatc2_MA0152.3 8 bp overlap
Nr1h3::Rxra 5 datasets
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_24h DE_24h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_36h DE_36h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_48h DE_48h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_72h DE_72h-Nr1h3Rxra_MA0494.2 16 bp overlap
Nr5A2 5 datasets
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_24h DE_24h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_36h DE_36h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_48h DE_48h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_72h DE_72h-Nr5A2_MA0505.3 9 bp overlap
OTX1 1 dataset
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 233 bp overlap
PITX1 1 dataset
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
POLR2A 2 datasets
ChIP sigmoid colon ENCFF754JQR 341 bp overlap
ChIP upper lobe of left lung ENCFF095BJW 371 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 114 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 263 bp overlap
POU6F1 1 dataset
Motif DE_36h DE_36h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap
PPARG 1 dataset
Motif DE_36h DE_36h-PPARG_MA0066.2 19 bp overlap
RAD21 1 dataset
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 251 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 165 bp overlap
RELB 3 datasets
Motif DE_24h DE_24h-RELB_MA1117.2 7 bp overlap
Motif DE_36h DE_36h-RELB_MA1117.2 7 bp overlap
Motif DE_48h DE_48h-RELB_MA1117.2 7 bp overlap
RFX2 1 dataset
Motif DE_36h DE_36h-RFX2_MA0600.3 14 bp overlap
RFX3 1 dataset
Motif DE_36h DE_36h-RFX3_MA0798.3 16 bp overlap
RFX5 1 dataset
Motif DE_36h DE_36h-RFX5_MA0510.3 14 bp overlap
RHOXF1 1 dataset
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
RUNX1 1 dataset
ChIP THP-1 GSE79899.RUNX1.THP-1 214 bp overlap
Rarg 5 datasets
Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap
Motif DE_24h DE_24h-Rarg_MA0860.1 17 bp overlap
Motif DE_36h DE_36h-Rarg_MA0860.1 17 bp overlap
Motif DE_48h DE_48h-Rarg_MA0860.1 17 bp overlap
Motif DE_72h DE_72h-Rarg_MA0860.1 17 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 368 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 442 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 399 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 412 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 375 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 364 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 63 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 202 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 233 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 288 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 181 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 333 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 230 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 416 bp overlap
SPI1 2 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 253 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 147 bp overlap
SPIB 1 dataset
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
SREBF1 2 datasets
Motif DE_36h DE_36h-SREBF1_MA0595.1 10 bp overlap
Motif DE_48h DE_48h-SREBF1_MA0595.1 10 bp overlap
SREBF2 2 datasets
Motif DE_36h DE_36h-SREBF2_MA0596.1 10 bp overlap
Motif DE_48h DE_48h-SREBF2_MA0596.1 10 bp overlap
STAT3 5 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 120 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 126 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 201 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 438 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 406 bp overlap
Spi1 1 dataset
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap
Stat6 2 datasets
Motif DE_36h DE_36h-Stat6_MA0520.2 10 bp overlap
Motif DE_48h DE_48h-Stat6_MA0520.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 236 bp overlap
TFAP2A 2 datasets
Motif DE_36h DE_36h-TFAP2A_MA0872.1 13 bp overlap
Motif DE_48h DE_48h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 2 datasets
Motif DE_36h DE_36h-TFAP2B_MA0813.1 13 bp overlap
Motif DE_48h DE_48h-TFAP2B_MA0813.1 13 bp overlap
TFAP2C 2 datasets
Motif DE_36h DE_36h-TFAP2C_MA0815.1 13 bp overlap
Motif DE_48h DE_48h-TFAP2C_MA0815.1 13 bp overlap
THRA 5 datasets
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
Motif DE_24h DE_24h-THRA_MA1969.2 18 bp overlap
Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap
Motif DE_48h DE_48h-THRA_MA1969.2 18 bp overlap
Motif DE_72h DE_72h-THRA_MA1969.2 18 bp overlap
THRB 5 datasets
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
Motif DE_24h DE_24h-THRB_MA1576.2 18 bp overlap
Motif DE_36h DE_36h-THRB_MA1576.2 18 bp overlap
Motif DE_48h DE_48h-THRB_MA1576.2 18 bp overlap
Motif DE_72h DE_72h-THRB_MA1576.2 18 bp overlap
TP53 1 dataset
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 333 bp overlap
VDR 2 datasets
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 312 bp overlap
ChIP THP-1_EtOH_1d GSE89431.VDR.THP-1_EtOH_1d 276 bp overlap
VEZF1 2 datasets
Motif DE_36h DE_36h-VEZF1_MA1578.2 6 bp overlap
Motif DE_48h DE_48h-VEZF1_MA1578.2 6 bp overlap
ZBTB17 1 dataset
Motif DE_36h DE_36h-ZBTB17_MA2102.1 8 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 196 bp overlap
ZNF157 2 datasets
Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap
Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap
ZNF189 1 dataset
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
Znf423 1 dataset
Motif DE_36h DE_36h-Znf423_MA0116.1 15 bp overlap