chr1 : 19,288,747 19,289,146
399 bp 78 TFs 1 linked gene
This 399 bp open chromatin element is linked to AKR7A3 and is bound by 78 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
AKR7A3 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:19,283,747 – 19,294,146
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP WTC11 ENCFF556XTF 231 bp overlap
AR 4 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 115 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 122 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 144 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 312 bp overlap
ARID4B 1 dataset
ChIP WTC11 ENCFF441HDK 272 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 399 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 248 bp overlap
ATF1 1 dataset
ChIP HCT-116 GSE130477.ATF1.HCT-116 137 bp overlap
BCL11A 7 datasets
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 57 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 98 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 69 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 68 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 67 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 93 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 98 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34pos GSE84677.BCL11B.thymus_CD34pos 95 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 211 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 154 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 135 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 399 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 191 bp overlap
ChIP RKO GSE47190.BRD1.RKO 345 bp overlap
BRD4 4 datasets
ChIP 22Rv1_DHT-ABBV-744 GSE118247.BRD4.22Rv1_DHT-ABBV-744 92 bp overlap
ChIP hESC GSE33281.BRD4.hESC 77 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 389 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 289 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 89 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 202 bp overlap
CTCF 2 datasets
ChIP Peyer's patch ENCFF701KWW 218 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 148 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 161 bp overlap
ChIP BLaER1 ENCFF460KDD 129 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 120 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 399 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 153 bp overlap
ChIP K-562 GSE23730.ERG.K-562 153 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 198 bp overlap
ESR1 9 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 207 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 98 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 232 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 277 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 269 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 281 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 175 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 364 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 357 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 251 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 245 bp overlap
EZH2 7 datasets
ChIP GM23338 ENCFF613YON 236 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 139 bp overlap
ChIP H1 ENCFF232NZA 342 bp overlap
ChIP H1 ENCFF232NZA 399 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 305 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 390 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 277 bp overlap
FOXA1 2 datasets
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 230 bp overlap
ChIP liver ERP002306.FOXA1.liver 173 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 290 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 294 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 240 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 154 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000AVB.HDAC2.WA01 174 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 70 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 196 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 362 bp overlap
HNF4A 2 datasets
ChIP IM95 GSE114018.HNF4A.IM95 149 bp overlap
ChIP liver ERP002306.HNF4A.liver 205 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 280 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 273 bp overlap
KDM4A 4 datasets
ChIP H1 ENCFF078LED 399 bp overlap
ChIP H1 ENCFF078LED 365 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 372 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 310 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 399 bp overlap
KLF4 2 datasets
ChIP PDAC GSE64557.KLF4.PDAC 399 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 289 bp overlap
KLF5 2 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 399 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 243 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 327 bp overlap
KLF9 1 dataset
ChIP MCF-7 ENCFF618FCM 399 bp overlap
KMT2A 2 datasets
ChIP MV4-11 GSE83671.KMT2A.MV4-11 300 bp overlap
ChIP RS4-11_DMSO-D3-180402 GSE127507.KMT2A.RS4-11_DMSO-D3-180402 313 bp overlap
MAX 5 datasets
ChIP H1 ENCFF914VQY 229 bp overlap
ChIP WTC11 ENCFF223QFY 365 bp overlap
ChIP WTC11 ENCFF223QFY 399 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 141 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 242 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 376 bp overlap
MYC 4 datasets
ChIP CD34 GSE85488.MYC.CD34 116 bp overlap
ChIP CD34 GSE85488.MYC.CD34 103 bp overlap
ChIP LoVo_PHASES GSE51290.MYC.LoVo_PHASES 293 bp overlap
ChIP MDA-MB-453_DHT GSE45201.MYC.MDA-MB-453_DHT 177 bp overlap
MYCN 4 datasets
ChIP 22Rv1_castrated GSE117304.MYCN.22Rv1_castrated 251 bp overlap
ChIP 22Rv1_intact GSE117304.MYCN.22Rv1_intact 255 bp overlap
ChIP BE2C GSE80151.MYCN.BE2C 150 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 150 bp overlap
MYOD1 2 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 163 bp overlap
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 149 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 262 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 341 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 366 bp overlap
POLR2A 19 datasets
ChIP Peyer's patch ENCFF767HVN 154 bp overlap
ChIP Peyer's patch ENCFF990IYL 163 bp overlap
ChIP adrenal gland ENCFF892SFM 225 bp overlap
ChIP body of pancreas ENCFF084VJR 139 bp overlap
ChIP body of pancreas ENCFF501FEC 399 bp overlap
ChIP body of pancreas ENCFF675RCN 299 bp overlap
ChIP body of pancreas ENCFF675RCN 302 bp overlap
ChIP body of pancreas ENCFF727UBE 270 bp overlap
ChIP body of pancreas ENCFF727UBE 331 bp overlap
ChIP prostate gland ENCFF832RQK 234 bp overlap
ChIP right lobe of liver ENCFF026NCK 290 bp overlap
ChIP spleen ENCFF706IUS 269 bp overlap
ChIP stomach ENCFF607ZPU 325 bp overlap
ChIP stomach ENCFF820WZN 172 bp overlap
ChIP thyroid gland ENCFF979LRR 368 bp overlap
ChIP transverse colon ENCFF193UMS 212 bp overlap
ChIP transverse colon ENCFF193UMS 377 bp overlap
ChIP transverse colon ENCFF607LKE 127 bp overlap
ChIP transverse colon ENCFF610RWV 380 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 137 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 399 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 399 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 399 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 281 bp overlap
REST 1 dataset
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 79 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 271 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 91 bp overlap
RUNX1 4 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 213 bp overlap
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 133 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 213 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 133 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 285 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 282 bp overlap
SIN3A 3 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 216 bp overlap
ChIP brain-prefrontal-cortex_ad1 GSE106870.SIN3A.brain-prefrontal-cortex_ad1 272 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 125 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 74 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 165 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 266 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 390 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 253 bp overlap
STAT3 2 datasets
ChIP HCC70 GSE152203.STAT3.HCC70 174 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 171 bp overlap
SUZ12 4 datasets
ChIP H1 ENCFF881NFR 399 bp overlap
ChIP H1 ENCFF881NFR 399 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 256 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 163 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 103 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 154 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 202 bp overlap
USF1 1 dataset
ChIP WTC11 ENCFF699QGS 292 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 229 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 341 bp overlap
ZBTB43 1 dataset
ChIP WTC11 ENCFF058JUB 390 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 213 bp overlap
ZNF219 1 dataset
ChIP WTC11 ENCFF998WKU 248 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 103 bp overlap