chr1 : 177,044,426 – 177,044,780

354 bp 91 TFs 0 linked genes

This 354 bp open chromatin element has no linked target genes and is bound by 91 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

91 transcription factors

ASCL1 1 dataset

Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 354 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 188 bp overlap

BCOR 2 datasets

ChIP WA01 GSE104690.BCOR.WA01 166 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 354 bp overlap

BRD1 1 dataset

ChIP HUES-64 GSE104059.BRD1.HUES-64 257 bp overlap

BRD4 1 dataset

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 196 bp overlap

CEBPB 2 datasets

ChIP H1 ENCFF871PTR 159 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 156 bp overlap

CHD8 1 dataset

ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap

CREB1 2 datasets

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 229 bp overlap

ChIP WA01 ENCSR000BSN.CREB1.WA01 144 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 341 bp overlap

DMRT3 1 dataset

Motif ES_0h ES_0h-DMRT3_MA0610.2 7 bp overlap

E2F6 3 datasets

Motif ES_0h ES_0h-E2F6_MA0471.3 8 bp overlap

ChIP H1 ENCFF785DWK 113 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 234 bp overlap

E2F8 1 dataset

Motif ES_0h ES_0h-E2F8_MA0865.3 9 bp overlap

ELK1::HOXB13 1 dataset

Motif ES_0h ES_0h-ELK1HOXB13_MA1932.2 15 bp overlap

EP300 2 datasets

ChIP H1 ENCFF927IYK 297 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 162 bp overlap

ERF::HOXB13 1 dataset

Motif ES_0h ES_0h-ERFHOXB13_MA1937.2 13 bp overlap

ESR1 1 dataset

ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 235 bp overlap

ESR2 1 dataset

Motif ES_0h ES_0h-ESR2_MA0258.2 15 bp overlap

ETS1 1 dataset

ChIP HUVEC-C_VEGF_1H GSE41166.ETS1.HUVEC-C_VEGF_1H 211 bp overlap

ETV6 1 dataset

ChIP WTC11 ENCFF812SCD 296 bp overlap

EZH2 2 datasets

ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 50 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 354 bp overlap

EZH2_phosphoT487 1 dataset

ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 354 bp overlap

FIGLA 1 dataset

Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap

FOXP1 2 datasets

ChIP H9 GSE31006.FOXP1.H9 157 bp overlap

ChIP WTC11 ENCFF338WGC 341 bp overlap

FOXP4 1 dataset

ChIP WTC11 ENCFF708TAF 352 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 136 bp overlap

HDAC2 3 datasets

ChIP H1 ENCFF939VKA 237 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 146 bp overlap

ChIP WA01 ENCSR000AVB.HDAC2.WA01 141 bp overlap

HNF4A 1 dataset

Motif ES_0h ES_0h-HNF4A_MA1494.2 14 bp overlap

HOXD12::ELK1 1 dataset

Motif ES_0h ES_0h-HOXD12ELK1_MA1958.2 13 bp overlap

Irf1 1 dataset

Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 209 bp overlap

JUN 2 datasets

ChIP ESC S34-ESC-d0-JUN-exp2 276 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 354 bp overlap

KDM1A 1 dataset

ChIP H1 ENCFF696SGD 276 bp overlap

MAFF 1 dataset

Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap

MAX 4 datasets

ChIP H1 ENCFF601FOM 312 bp overlap

ChIP H1 ENCFF914VQY 302 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 228 bp overlap

ChIP WTC11 ENCFF223QFY 354 bp overlap

MEIS1 2 datasets

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

MYC 1 dataset

ChIP H1 ENCFF794ZJT 262 bp overlap

Mafb 1 dataset

Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap

Msgn1 2 datasets

Motif ES_0h ES_0h-Msgn1_MA1524.3 10 bp overlap

NANOG 7 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 354 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 269 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 216 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 354 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 266 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 240 bp overlap

ChIP hESC GSE18292.NANOG.hESC 93 bp overlap

NFATC3 1 dataset

Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap

NIPBL 1 dataset

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 307 bp overlap

NR2C1 1 dataset

Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap

NRL 1 dataset

Motif ES_0h ES_0h-NRL_MA0842.3 12 bp overlap

Nfatc1 1 dataset

Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap

Nr1H2 1 dataset

Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap

Nr2F6 1 dataset

Motif ES_0h ES_0h-Nr2F6_MA0728.1 15 bp overlap

POU5F1 4 datasets

ChIP BG03 GSE21614.POU5F1.BG03 183 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 354 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 354 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 115 bp overlap

Pou5f1::Sox2 1 dataset

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

RARA 1 dataset

Motif ES_0h ES_0h-RARA_MA0730.1 17 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 354 bp overlap

RREB1 1 dataset

Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap

Rarb 1 dataset

Motif ES_0h ES_0h-Rarb_MA0858.1 17 bp overlap

SIN3A 3 datasets

ChIP H1 ENCFF042ZSL 354 bp overlap

ChIP WA01 ENCSR000EBO.SIN3A.WA01 225 bp overlap

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 188 bp overlap

SIX1 1 dataset

Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 205 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 300 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 327 bp overlap

SNAI1 1 dataset

Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap

SNAI3 1 dataset

Motif ES_0h ES_0h-SNAI3_MA1559.2 9 bp overlap

SOX10 1 dataset

Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap

SOX2 2 datasets

ChIP HNSC GSE69479.SOX2.HNSC 273 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 354 bp overlap

SOX21 1 dataset

Motif ES_0h ES_0h-SOX21_MA0866.1 15 bp overlap

SP1 1 dataset

ChIP H1 ENCFF263FUH 321 bp overlap

SPIC 1 dataset

Motif ES_0h ES_0h-SPIC_MA0687.2 13 bp overlap

STAT1 1 dataset

Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap

STAT3 1 dataset

Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap

Six4 1 dataset

Motif ES_0h ES_0h-Six4_MA2001.2 7 bp overlap

Sox1 1 dataset

Motif ES_0h ES_0h-Sox1_MA0870.1 15 bp overlap

Stat5b 1 dataset

Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 143 bp overlap

TCF12 3 datasets

Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap

ChIP H1 ENCFF203EBH 251 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 171 bp overlap

TCF3 1 dataset

Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap

TCF4 1 dataset

Motif ES_0h ES_0h-TCF4_MA0830.3 8 bp overlap

TEAD1 1 dataset

ChIP WTC11 ENCFF502QUV 354 bp overlap

TFAP2C 2 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 278 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 256 bp overlap

USF1 1 dataset

ChIP WA01 ENCSR000BIU.USF1.WA01 123 bp overlap

YY1 2 datasets

ChIP H1 ENCFF524BTL 336 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 303 bp overlap

ZBTB24 1 dataset

Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap

ZEB1 1 dataset

Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap

ZFP14 1 dataset

Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap

ZNF143 1 dataset

ChIP WA01 ENCSR000EBW.ZNF143.WA01 97 bp overlap

ZNF324 1 dataset

Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap

ZNF341 1 dataset

Motif ES_0h ES_0h-ZNF341_MA1655.2 8 bp overlap

ZNF454 1 dataset

Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 291 bp overlap

ZNF610 1 dataset

Motif ES_0h ES_0h-ZNF610_MA1713.2 10 bp overlap

Zfp809 1 dataset

Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap