chr1 : 168,693,692 168,694,391
699 bp 87 TFs 0 linked genes
This 699 bp open chromatin element has no linked target genes and is bound by 87 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:168,688,692 – 168,699,391
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
AR 39 datasets
ChIP LNCaP GSE85558.AR.LNCaP 55 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 189 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 103 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 281 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 369 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 198 bp overlap
ChIP LNCaP_DHT_100nM_3279 GSE86456.AR.LNCaP_DHT_100nM_3279 92 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 194 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 168 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 193 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 149 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 110 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 155 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 140 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 135 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 191 bp overlap
ChIP LTAD_EtOH GSE94577.AR.LTAD_EtOH 221 bp overlap
ChIP VCaP GSE148358.AR.VCaP 64 bp overlap
ChIP VCaP-LTAD_DHT_10nM GSE94577.AR.VCaP-LTAD_DHT_10nM 185 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 118 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 264 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 151 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 490 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 160 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 83 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 169 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.AR.primary-prostate-cancer_P2_DSG 66 bp overlap
ChIP prostate GSE56288.AR.prostate 51 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 106 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 116 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 90 bp overlap
ChIP prostate_1636_T GSE130408.AR.prostate_1636_T 64 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 68 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 314 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 78 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 92 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 233 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 150 bp overlap
ChIP prostate_P7_T GSE130408.AR.prostate_P7_T 54 bp overlap
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 105 bp overlap
ASH2L 2 datasets
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 242 bp overlap
ChIP HepG2 ENCFF207QHL 208 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 109 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 187 bp overlap
BAP1 1 dataset
ChIP UM-RC-6_BAP1-C91A-mutant GSE101987.BAP1.UM-RC-6_BAP1-C91A-mutant 455 bp overlap
BRD4 7 datasets
ChIP HT29 GSE73319.BRD4.HT29 443 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 590 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 458 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 597 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.BRD4.LNCaP-clone-FGC_DHT-DMSO 263 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 284 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 161 bp overlap
CDX2 3 datasets
ChIP LS180 GSE31939.CDX2.LS180 130 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 190 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 180 bp overlap
CHD4 1 dataset
ChIP HepG2 ENCFF615GUT 286 bp overlap
CREB1 5 datasets
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 139 bp overlap
ChIP HepG2 ENCFF576ERP 196 bp overlap
ChIP HepG2 ENCFF792THT 247 bp overlap
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 61 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 59 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 80 bp overlap
CREM 2 datasets
ChIP Hep-G2 ENCSR903ELW.CREM.Hep-G2 114 bp overlap
ChIP HepG2 ENCFF049UDY 131 bp overlap
CTCFL 2 datasets
Motif DE_60h DE_60h-CTCFL_MA1102.3 8 bp overlap
Motif DE_72h DE_72h-CTCFL_MA1102.3 8 bp overlap
DLX6 1 dataset
ChIP HepG2 ENCFF371CVH 86 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 165 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 146 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 231 bp overlap
ERG 8 datasets
ChIP VCaP GSE83650.ERG.VCaP 154 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 154 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 184 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 212 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 129 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 148 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 192 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 247 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 181 bp overlap
ESRRA 2 datasets
ChIP HepG2 ENCFF033DVS 132 bp overlap
ChIP HepG2 ENCFF033DVS 344 bp overlap
ETV5 1 dataset
ChIP HepG2 ENCFF456LSA 264 bp overlap
FOXA1 14 datasets
ChIP LNCaP GSE56288.FOXA1.LNCaP 77 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 57 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 382 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 142 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 305 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 148 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 105 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 67 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 94 bp overlap
ChIP prostate_P19 GSE130408.FOXA1.prostate_P19 74 bp overlap
ChIP prostate_P19_T GSE130408.FOXA1.prostate_P19_T 138 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 63 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 159 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 111 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 518 bp overlap
ChIP DE DE-FOXA2-2 547 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 144 bp overlap
FOXN3 1 dataset
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
Foxq1 1 dataset
Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap
GATA1 2 datasets
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
Motif DE_72h DE_72h-GATA1_MA0035.5 7 bp overlap
GATA2 2 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 115 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 434 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 677 bp overlap
ChIP DE DE-GATA4-2 699 bp overlap
ChIP foregut GSE117136.GATA4.foregut 581 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 665 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 615 bp overlap
ChIP DE DE-GATA6-2 665 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 650 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 371 bp overlap
ChIP foregut GSE117136.GATA6.foregut 487 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 480 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 286 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 120 bp overlap
GFI1 1 dataset
ChIP HepG2 ENCFF472INF 243 bp overlap
HAND2 1 dataset
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP HepG2 ENCFF990GUQ 216 bp overlap
HOXA3 1 dataset
ChIP HepG2 ENCFF374TCI 266 bp overlap
HOXB13 18 datasets
ChIP LNCaP GSE96652.HOXB13.LNCaP 77 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.HOXB13.prostate-cancer_PDX_189-4 115 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 69 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 110 bp overlap
ChIP prostate_2030 GSE130408.HOXB13.prostate_2030 51 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 109 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 118 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 91 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 64 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 160 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 134 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 227 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 55 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 60 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 158 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 150 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 155 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 159 bp overlap
HOXC13 1 dataset
Motif DE_60h DE_60h-HOXC13_MA0907.2 9 bp overlap
INSM1 1 dataset
Motif DE_60h DE_60h-INSM1_MA0155.1 12 bp overlap
JUND 1 dataset
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 136 bp overlap
KLF16 2 datasets
Motif DE_60h DE_60h-KLF16_MA0741.1 11 bp overlap
Motif DE_72h DE_72h-KLF16_MA0741.1 11 bp overlap
MED1 2 datasets
ChIP VCaP_DHT GSE125245.MED1.VCaP_DHT 71 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 278 bp overlap
MEIS1 2 datasets
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 159 bp overlap
ChIP K562 ENCFF320GSD 226 bp overlap
MGA 2 datasets
ChIP HepG2 ENCFF057YJE 200 bp overlap
ChIP HepG2 ENCFF057YJE 479 bp overlap
MZF1 2 datasets
Motif DE_60h DE_60h-MZF1_MA0056.3 8 bp overlap
Motif DE_72h DE_72h-MZF1_MA0056.3 8 bp overlap
NCOR1 1 dataset
ChIP HepG2 ENCFF685NAH 169 bp overlap
NFKB1 2 datasets
Motif DE_60h DE_60h-NFKB1_MA0105.4 13 bp overlap
Motif DE_72h DE_72h-NFKB1_MA0105.4 13 bp overlap
NKX3-1 1 dataset
ChIP LNCaP_DHT GSE28264.NKX3-1.LNCaP_DHT 65 bp overlap
NR1H2 2 datasets
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 124 bp overlap
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 259 bp overlap
PHF21A 1 dataset
ChIP HepG2 ENCFF525EUW 165 bp overlap
PPARG 3 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 206 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 229 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 255 bp overlap
PRDM9 1 dataset
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
RUNX1 2 datasets
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 116 bp overlap
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 345 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 68 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 557 bp overlap
SMAD3 1 dataset
ChIP HepG2 ENCFF309PKF 140 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 63 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 417 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 412 bp overlap
SOX6 1 dataset
ChIP HepG2 ENCFF767OCK 110 bp overlap
SP8 2 datasets
Motif DE_60h DE_60h-SP8_MA0747.2 11 bp overlap
Motif DE_72h DE_72h-SP8_MA0747.2 11 bp overlap
SSRP1 2 datasets
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 114 bp overlap
ChIP HepG2 ENCFF540BLL 71 bp overlap
STAT1 1 dataset
Motif DE_60h DE_60h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap
Spz1 1 dataset
Motif DE_60h DE_60h-Spz1_MA0111.1 11 bp overlap
Stat4 1 dataset
Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap
Stat5a 1 dataset
Motif DE_60h DE_60h-Stat5a_MA1624.2 9 bp overlap
Stat5b 1 dataset
Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 217 bp overlap
TLE3 1 dataset
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 51 bp overlap
VDR 2 datasets
ChIP LNCaP GSE64656.VDR.LNCaP 211 bp overlap
ChIP LNCaP GSE64656.VDR.LNCaP 339 bp overlap
XBP1 3 datasets
ChIP LNCaP_R1881 GSE121880.XBP1.LNCaP_R1881 90 bp overlap
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 195 bp overlap
ChIP LNCaP_px330 GSE121880.XBP1.LNCaP_px330 207 bp overlap
ZBTB12 1 dataset
Motif DE_60h DE_60h-ZBTB12_MA1649.2 7 bp overlap
ZBTB21 2 datasets
ChIP Hep-G2 ENCSR549PAU.ZBTB21.Hep-G2 151 bp overlap
ChIP HepG2 ENCFF276JLT 238 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 139 bp overlap
ZMAT3 1 dataset
ChIP HepG2 ENCFF053XGJ 430 bp overlap
ZNF148 1 dataset
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
ZNF320 1 dataset
Motif DE_60h DE_60h-ZNF320_MA1976.2 20 bp overlap
ZNF530 1 dataset
Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap
ZNF670 1 dataset
ChIP HepG2 ENCFF684IKN 163 bp overlap
ZNF682 2 datasets
Motif DE_60h DE_60h-ZNF682_MA1599.2 11 bp overlap
Motif DE_72h DE_72h-ZNF682_MA1599.2 11 bp overlap