chr7 : 81,761,688 – 81,762,168
480 bp 99 TFs 1 linked gene
This 480 bp open chromatin element is linked to HGF and is bound by 99 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
HGF 8.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:81,756,688 – 81,767,168
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
99 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 354 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 386 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 177 bp overlap
ATF2 3 datasets
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
Motif DE_36h DE_36h-ATF2_MA1632.2 10 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 242 bp overlap
ATF3 2 datasets
Motif DE_12h DE_12h-ATF3_MA0605.3 10 bp overlap
Motif DE_36h DE_36h-ATF3_MA0605.3 10 bp overlap
ATF7 2 datasets
Motif DE_12h DE_12h-ATF7_MA0834.2 10 bp overlap
Motif DE_36h DE_36h-ATF7_MA0834.2 10 bp overlap
CEBPB 1 dataset
ChIP H1 ENCFF871PTR 200 bp overlap
CREB1 5 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif DE_36h DE_36h-CREB1_MA0018.5 8 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 246 bp overlap
ChIP H1 ENCFF955PMP 235 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 201 bp overlap
CREM 2 datasets
Motif DE_12h DE_12h-CREM_MA0609.3 10 bp overlap
Motif DE_36h DE_36h-CREM_MA0609.3 10 bp overlap
CTCF 8 datasets
ChIP BE2C ENCFF757SRF 317 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H9 ENCFF152GTF 451 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 213 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 194 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 148 bp overlap
Creb5 2 datasets
Motif DE_12h DE_12h-Creb5_MA0840.2 10 bp overlap
Motif DE_36h DE_36h-Creb5_MA0840.2 10 bp overlap
ELF1 2 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
ELF3 2 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 64 bp overlap
ChIP hESC GSE26097.EOMES.hESC 248 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 276 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 181 bp overlap
Erg 2 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
Motif DE_36h DE_36h-FOS_MA1951.2 13 bp overlap
FOS::JUN 2 datasets
Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap
Motif DE_36h DE_36h-FOSJUN_MA1126.2 10 bp overlap
FOSB::JUN 2 datasets
Motif DE_12h DE_12h-FOSBJUN_MA1127.1 11 bp overlap
Motif DE_36h DE_36h-FOSBJUN_MA1127.1 11 bp overlap
FOSB::JUNB 2 datasets
Motif DE_12h DE_12h-FOSBJUNB_MA1136.1 10 bp overlap
Motif DE_36h DE_36h-FOSBJUNB_MA1136.1 10 bp overlap
FOSL1::JUN 2 datasets
Motif DE_12h DE_12h-FOSL1JUN_MA1129.1 10 bp overlap
Motif DE_36h DE_36h-FOSL1JUN_MA1129.1 10 bp overlap
FOSL2::JUN 2 datasets
Motif DE_12h DE_12h-FOSL2JUN_MA1131.2 10 bp overlap
Motif DE_36h DE_36h-FOSL2JUN_MA1131.2 10 bp overlap
FOSL2::JUNB 2 datasets
Motif DE_12h DE_12h-FOSL2JUNB_MA1139.2 10 bp overlap
Motif DE_36h DE_36h-FOSL2JUNB_MA1139.2 10 bp overlap
FOSL2::JUND 2 datasets
Motif DE_12h DE_12h-FOSL2JUND_MA1145.2 10 bp overlap
Motif DE_36h DE_36h-FOSL2JUND_MA1145.2 10 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXO1::ELK3 2 datasets
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif DE_36h DE_36h-FOXO1ELK3_MA1955.2 13 bp overlap
GABPA 2 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 86 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 270 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 272 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH ENCFF370MHZ 258 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 449 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 139 bp overlap
INSM1 2 datasets
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 135 bp overlap
JDP2 2 datasets
Motif DE_12h DE_12h-JDP2_MA0656.2 10 bp overlap
Motif DE_36h DE_36h-JDP2_MA0656.2 10 bp overlap
JUN 6 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 262 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 272 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 308 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 275 bp overlap
JUN::JUNB 2 datasets
Motif DE_12h DE_12h-JUNJUNB_MA1133.2 11 bp overlap
Motif DE_36h DE_36h-JUNJUNB_MA1133.2 11 bp overlap
JUNB 2 datasets
Motif DE_12h DE_12h-JUNB_MA1140.3 11 bp overlap
Motif DE_36h DE_36h-JUNB_MA1140.3 11 bp overlap
JUND 4 datasets
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
Motif DE_36h DE_36h-JUND_MA0492.2 11 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 127 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 110 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
NANOG 4 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 219 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 249 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 273 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCFF965AKM 52 bp overlap
NFYB 4 datasets
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
Motif DE_24h DE_24h-NFYB_MA0502.3 9 bp overlap
Motif DE_36h DE_36h-NFYB_MA0502.3 9 bp overlap
Motif ES_0h ES_0h-NFYB_MA0502.3 9 bp overlap
NR1D1 2 datasets
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
Motif DE_36h DE_36h-NR1D1_MA1531.2 14 bp overlap
NR1D2 2 datasets
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
Motif DE_36h DE_36h-NR1D2_MA1532.2 15 bp overlap
NR2C1 2 datasets
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA1538.1 15 bp overlap
Motif DE_36h DE_36h-NR2F1_MA1538.1 15 bp overlap
NR2F6 2 datasets
Motif DE_12h DE_12h-NR2F6_MA1539.1 15 bp overlap
Motif DE_36h DE_36h-NR2F6_MA1539.1 15 bp overlap
NR4A2::RXRA 2 datasets
Motif DE_12h DE_12h-NR4A2RXRA_MA1147.2 13 bp overlap
Motif DE_36h DE_36h-NR4A2RXRA_MA1147.2 13 bp overlap
Nr1H2 2 datasets
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 332 bp overlap
PPARG 2 datasets
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
Motif DE_36h DE_36h-PPARG_MA0066.2 19 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 96 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
RORA 2 datasets
Motif DE_12h DE_12h-RORA_MA0071.1 10 bp overlap
Motif DE_36h DE_36h-RORA_MA0071.1 10 bp overlap
RORB 2 datasets
Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap
Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap
Runx1 4 datasets
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
Motif DE_24h DE_24h-Runx1_MA0002.3 9 bp overlap
Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap
Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 140 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 189 bp overlap
SMARCC1 5 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 80 bp overlap
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 220 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 266 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 194 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 184 bp overlap
SOX13 1 dataset
Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap
SOX14 1 dataset
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 429 bp overlap
SOX2 2 datasets
Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 203 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SOX8 1 dataset
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 138 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 480 bp overlap
STAT1::STAT2 1 dataset
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 283 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 243 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 152 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
THRA 1 dataset
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
THRB 3 datasets
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
Motif DE_36h DE_36h-THRB_MA1576.2 18 bp overlap
ZIC1 4 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif DE_24h DE_24h-ZIC1_MA0696.1 14 bp overlap
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 298 bp overlap
ZIC4 4 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
Motif ES_0h ES_0h-ZIC4_MA0751.2 14 bp overlap
ZNF135 2 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 294 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 148 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF8 2 datasets
Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap
Motif DE_36h DE_36h-ZNF8_MA1718.1 20 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
ZSCAN31 4 datasets
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Motif DE_24h DE_24h-ZSCAN31_MA1722.2 18 bp overlap
Motif DE_36h DE_36h-ZSCAN31_MA1722.2 18 bp overlap
Motif ES_0h ES_0h-ZSCAN31_MA1722.2 18 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Zic2 4 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
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