chr7 : 18,896,398 18,896,867
469 bp 132 TFs 0 linked genes
This 469 bp open chromatin element has no linked target genes and is bound by 132 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:18,891,398 – 18,901,867
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
132 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 236 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 107 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 410 bp overlap
BRD2 2 datasets
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 235 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 189 bp overlap
BRD4 3 datasets
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 274 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 187 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 469 bp overlap
CEBPA 1 dataset
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 469 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 469 bp overlap
CREB5 1 dataset
ChIP SK-N-SH ENCFF144PMI 345 bp overlap
CSRNP3 1 dataset
ChIP SK-N-SH ENCFF710BXD 345 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 155 bp overlap
ERG 2 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 167 bp overlap
ChIP arterial-endothelial-cells GSE128382.ERG.arterial-endothelial-cells 153 bp overlap
ESR1 1 dataset
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 227 bp overlap
ESRRB 1 dataset
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
ETS1 1 dataset
Motif DE_12h DE_12h-ETS1_MA0098.4 9 bp overlap
ETS2 1 dataset
Motif DE_12h DE_12h-ETS2_MA1484.2 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 266 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GABPA 2 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA2 1 dataset
Motif DE_12h DE_12h-GATA2_MA0036.4 7 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 278 bp overlap
GATA4 1 dataset
Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap
GATA6 5 datasets
Motif DE_12h DE_12h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 306 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 221 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 330 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 346 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
Gata3 1 dataset
Motif DE_12h DE_12h-Gata3_MA0037.5 8 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
HNF4A 2 datasets
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap
HNF4G 1 dataset
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Hmga1 1 dataset
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
Hmx1 2 datasets
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx2 2 datasets
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Hmx3 1 dataset
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
IRF9 1 dataset
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 287 bp overlap
ISL2 3 datasets
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Irf1 2 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Isl1 1 dataset
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MED1 1 dataset
ChIP HCT-116 GSE121798.MED1.HCT-116 140 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif DE_12h DE_12h-MEF2B_MA0660.1 12 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 336 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 185 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 184 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 469 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 285 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
NKX6-1 1 dataset
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
NKX6-3 1 dataset
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
NR6A1 1 dataset
Motif DE_12h DE_12h-NR6A1_MA1541.2 14 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nkx3-2 2 datasets
Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap
Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 148 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 242 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 152 bp overlap
PATZ1 1 dataset
ChIP SK-N-SH ENCFF650NCN 333 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 232 bp overlap
PGR 1 dataset
Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 275 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 469 bp overlap
POU6F1 1 dataset
ChIP SK-N-SH ENCFF834EMP 331 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 447 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 125 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 346 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 326 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 280 bp overlap
SMAD2 2 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 449 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 389 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 328 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 445 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 331 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 240 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 341 bp overlap
SMARCA2 3 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 261 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 385 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 256 bp overlap
SMARCA4 5 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 246 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 238 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 388 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 273 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 352 bp overlap
SOX21 1 dataset
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
SPDEF 1 dataset
Motif DE_12h DE_12h-SPDEF_MA0686.2 10 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
STAT3 1 dataset
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 326 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 141 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 292 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 4 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 254 bp overlap
ChIP HCT116 ENCFF038POZ 97 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 272 bp overlap
TEAD1 5 datasets
ChIP CCLP1 GSE62272.TEAD1.CCLP1 128 bp overlap
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 200 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 241 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 266 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 3 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 183 bp overlap
TRPS1 1 dataset
Motif DE_12h DE_12h-TRPS1_MA1970.2 8 bp overlap
TWIST1 2 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 156 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 156 bp overlap
Thap11 1 dataset
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 469 bp overlap
ZC3H10 1 dataset
ChIP SK-N-SH ENCFF465WAR 200 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZIM3 2 datasets
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 134 bp overlap
ZNF324 1 dataset
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF416 1 dataset
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF680 3 datasets
ChIP HEK293 ENCFF418WHE 322 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 425 bp overlap
ChIP HEK293 GSE76494.ZNF680.HEK293 330 bp overlap