chr6 : 98,828,971 – 98,829,435
464 bp 81 TFs 3 linked genes
This 464 bp open chromatin element is linked to ENSG00000283010, ENSG00000289501, and POU3F2 and is bound by 81 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000283010 3.1 kb Proximal Proximity
ENSG00000289501 3.5 kb Proximal Proximity
POU3F2 5.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:98,823,971 – 98,834,435
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 162 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 118 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 210 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 464 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 459 bp overlap
BCOR 5 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 157 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 464 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 107 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 172 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 464 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 219 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 201 bp overlap
BRD4 4 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 464 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 80 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 315 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 206 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 130 bp overlap
CDK7 2 datasets
ChIP Jurkat GSE50622.CDK7.Jurkat 464 bp overlap
ChIP Jurkat GSE83777.CDK7.Jurkat 333 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 234 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 56 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 252 bp overlap
CTCF 51 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 210 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 282 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 163 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 238 bp overlap
ChIP H9 ENCFF152GTF 442 bp overlap
ChIP H9 ENCFF152GTF 240 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 192 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 239 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 250 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 198 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 215 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 201 bp overlap
ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 95 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 280 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 145 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 158 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 111 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 216 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 213 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 139 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 217 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 298 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 247 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF311KBD 407 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 435 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF354RKX 449 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 330 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 361 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF403LNW 395 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 437 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 357 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF478RRB 384 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF514PNC 353 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF562MJV 321 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 404 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 440 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 383 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 387 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 389 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 190 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF841TWE 403 bp overlap
ChIP endodermal cell ENCFF471YCZ 389 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 271 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 230 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 358 bp overlap
ChIP neural cell ENCFF335ADI 397 bp overlap
ChIP neural crest cell ENCFF182LWK 409 bp overlap
ChIP neural crest cell ENCFF182LWK 209 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 229 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 112 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 292 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF364PUR 269 bp overlap
ChIP BLaER1 ENCFF460KDD 358 bp overlap
Ddit3::Cebpa 1 dataset
Motif ES_0h ES_0h-Ddit3Cebpa_MA0019.2 10 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 204 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 187 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 268 bp overlap
ETS1 4 datasets
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 450 bp overlap
ChIP THP-6_shEts1 GSE138516.ETS1.THP-6_shEts1 427 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 464 bp overlap
ChIP cardiomyocyte_D5 GSE129986.ETS1.cardiomyocyte_D5 228 bp overlap
ETV6 1 dataset
Motif ES_0h ES_0h-ETV6_MA0645.2 9 bp overlap
ETV7 1 dataset
Motif ES_0h ES_0h-ETV7_MA1708.2 9 bp overlap
EZH2 29 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 67 bp overlap
ChIP GM23248 ENCFF404ZHM 414 bp overlap
ChIP GM23248 ENCFF404ZHM 197 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 322 bp overlap
ChIP GM23338 ENCFF613YON 385 bp overlap
ChIP H1 ENCFF232NZA 464 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 265 bp overlap
ChIP Jurkat_KO GSE147198.EZH2.Jurkat_KO 211 bp overlap
ChIP T98G GSE112240.EZH2.T98G 260 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 449 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 464 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 464 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 464 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 264 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 464 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 362 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 132 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 464 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 443 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 153 bp overlap
ChIP fibroblast of lung ENCFF479BAW 464 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 464 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 464 bp overlap
ChIP hepatocyte ENCFF118DKH 89 bp overlap
ChIP hepatocyte ENCFF552DZB 312 bp overlap
ChIP hepatocyte ENCFF552DZB 289 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 464 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 400 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 298 bp overlap
EZH2_phosphoT487 3 datasets
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 310 bp overlap
ChIP OCI-Ly7 ENCSR565XSL.EZH2_phosphoT487.OCI-Ly7 464 bp overlap
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 464 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 170 bp overlap
FOXL2 1 dataset
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 207 bp overlap
FOXP1 1 dataset
ChIP neural-progenitor GSE62718.FOXP1.neural-progenitor 283 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 107 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 424 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 464 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 448 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 223 bp overlap
JARID2 4 datasets
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 425 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 464 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 464 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 464 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 315 bp overlap
KLF9 2 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 95 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 177 bp overlap
KMT2A 2 datasets
ChIP MOLM-13 GSE114981.KMT2A.MOLM-13 151 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 346 bp overlap
MAFF 1 dataset
Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap
MED1 1 dataset
ChIP Jurkat GSE59657.MED1.Jurkat 75 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 249 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 304 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 445 bp overlap
MYB 3 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 464 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 70 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 364 bp overlap
Mafb 1 dataset
Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 464 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 406 bp overlap
NRF1 14 datasets
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 110 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 424 bp overlap
ChIP K-562 ENCSR494TDU.NRF1.K-562 431 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 227 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 109 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 122 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 101 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 209 bp overlap
ChIP K562 ENCFF130SGK 362 bp overlap
ChIP K562 ENCFF130SGK 313 bp overlap
ChIP K562 ENCFF689EWI 174 bp overlap
ChIP K562 ENCFF689EWI 361 bp overlap
ChIP K562 ENCFF791UHF 441 bp overlap
ChIP T-47D_HAEGIN2 GSE59935.NRF1.T-47D_HAEGIN2 219 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 341 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 338 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 295 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 127 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 455 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 239 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 207 bp overlap
Prdm4 1 dataset
Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap
RAD21 2 datasets
ChIP neural ENCSR198ZYJ.RAD21.neural 364 bp overlap
ChIP neural cell ENCFF564MOT 458 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 230 bp overlap
ChIP THP-6_shCtrl GSE138516.RBPJ.THP-6_shCtrl 391 bp overlap
RING1 1 dataset
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 298 bp overlap
RNF2 3 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 461 bp overlap
ChIP H1 ENCFF239FFS 348 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 464 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 66 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 66 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 464 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 282 bp overlap
SMARCA4 4 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 404 bp overlap
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 264 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 231 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 464 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 276 bp overlap
SMC3 3 datasets
ChIP neural ENCSR404BPV.SMC3.neural 430 bp overlap
ChIP neural cell ENCFF795YGY 464 bp overlap
ChIP neural cell ENCFF795YGY 300 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 158 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 339 bp overlap
SP4 1 dataset
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPI1 4 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 222 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 141 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 130 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 133 bp overlap
SPIB 1 dataset
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 227 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 431 bp overlap
SUPT5H 1 dataset
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 191 bp overlap
SUZ12 4 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 420 bp overlap
ChIP H1 ENCFF881NFR 464 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 464 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 448 bp overlap
Spi1 1 dataset
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
TAF1 1 dataset
ChIP neural ENCSR000BTX.TAF1.neural 104 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 157 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 181 bp overlap
YY1 2 datasets
ChIP ALL GSE145549.YY1.ALL 275 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 101 bp overlap
Yy1 1 dataset
Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 231 bp overlap
ZBTB44 1 dataset
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 171 bp overlap
ZFP42 1 dataset
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZMIZ1 2 datasets
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 378 bp overlap
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 449 bp overlap
ZNF140 1 dataset
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF263 2 datasets
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ChIP K562 ENCFF640RNA 400 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 199 bp overlap
ZNF528 1 dataset
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
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