chr6 : 83,258,596 83,258,895
299 bp 93 TFs 0 linked genes
This 299 bp open chromatin element has no linked target genes and is bound by 93 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:83,253,596 – 83,263,895
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
AR 1 dataset
ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 71 bp overlap
ASCL1 2 datasets
Motif DE_60h DE_60h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 136 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 114 bp overlap
Arid3a 1 dataset
Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap
Ascl2 1 dataset
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
BRD4 2 datasets
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 288 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 277 bp overlap
Bcl11B 1 dataset
Motif DE_60h DE_60h-Bcl11B_MA1989.2 9 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 218 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 299 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 299 bp overlap
CTCF 4 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 204 bp overlap
ChIP hESC_D80 GSE116862.CTCF.hESC_D80 223 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 291 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 261 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 299 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 281 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 192 bp overlap
FIGLA 1 dataset
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 299 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 299 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 299 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 291 bp overlap
ChIP DE DE-FOXA2-1 299 bp overlap
ChIP DE DE-FOXA2-2 299 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 200 bp overlap
GATA2 2 datasets
ChIP dermal-fibroblast GSE51025.GATA2.dermal-fibroblast 243 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 240 bp overlap
GATA4 11 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 299 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 252 bp overlap
ChIP DE DE-GATA4-1 299 bp overlap
ChIP DE DE-GATA4-2 299 bp overlap
ChIP G296S GSE85628.GATA4.G296S 299 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 299 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 299 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 183 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 190 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 265 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 252 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 299 bp overlap
ChIP DE DE-GATA6-2 299 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 299 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 280 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 299 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 299 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 294 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 299 bp overlap
GFI1B 1 dataset
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 186 bp overlap
GLI2 2 datasets
ChIP HEK293 ENCFF700EUN 196 bp overlap
ChIP HEK293 ENCSR978EQY.GLI2.HEK293 168 bp overlap
Hand1 1 dataset
Motif DE_60h DE_60h-Hand1_MA2123.1 9 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 229 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 225 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 219 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 299 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 272 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 115 bp overlap
KLF13 1 dataset
ChIP HEK293 ENCSR946ZLI.KLF13.HEK293 227 bp overlap
KLF16 1 dataset
ChIP HEK293 ENCFF558HSJ 185 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 217 bp overlap
MED1 2 datasets
ChIP G296S GSE85628.MED1.G296S 151 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 151 bp overlap
MEF2B 1 dataset
Motif DE_60h DE_60h-MEF2B_MA0660.1 12 bp overlap
MEF2D 4 datasets
Motif DE_60h DE_60h-MEF2D_MA0773.1 12 bp overlap
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 299 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 267 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 269 bp overlap
MEIS1 1 dataset
ChIP A-673 GSE109477.MEIS1.A-673 176 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 227 bp overlap
ChIP K562 ENCFF320GSD 299 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 203 bp overlap
MSC 1 dataset
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 299 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 218 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 299 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 246 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 231 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 171 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 101 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 217 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 136 bp overlap
OTX2 2 datasets
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 299 bp overlap
ChIP retina_pigment GSE60024.OTX2.retina_pigment 259 bp overlap
PAX1 1 dataset
Motif DE_60h DE_60h-PAX1_MA0779.2 16 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 206 bp overlap
PAX9 1 dataset
Motif DE_60h DE_60h-PAX9_MA0781.2 16 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 244 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 297 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 161 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 236 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 226 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 253 bp overlap
RREB1 1 dataset
Motif DE_60h DE_60h-RREB1_MA0073.2 19 bp overlap
Runx1 1 dataset
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 299 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 299 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 299 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 79 bp overlap
SNAI1 1 dataset
Motif DE_60h DE_60h-SNAI1_MA1558.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 299 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 287 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 297 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 197 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_L169A GSE139053.SS18-SSX.fibroblast_L169A 86 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 261 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 206 bp overlap
TCF12 1 dataset
Motif DE_60h DE_60h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_60h DE_60h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap
TEAD4 2 datasets
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 174 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 145 bp overlap
TFAP2C 1 dataset
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 121 bp overlap
Thap11 1 dataset
Motif DE_60h DE_60h-Thap11_MA1573.2 14 bp overlap
Vdr 1 dataset
Motif DE_60h DE_60h-Vdr_MA0693.4 7 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 133 bp overlap
ZEB1 1 dataset
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 299 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 255 bp overlap
ZNF143 1 dataset
Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 287 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 233 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 230 bp overlap
ZNF211 1 dataset
Motif DE_60h DE_60h-ZNF211_MA1974.2 10 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 201 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 233 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 229 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 269 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 205 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 299 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 281 bp overlap
ZNF692 2 datasets
Motif DE_60h DE_60h-ZNF692_MA1986.2 8 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 204 bp overlap
ZNF75D 1 dataset
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 209 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 299 bp overlap
ZSCAN30 1 dataset
ChIP HEK293 ENCFF082YBI 299 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 299 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 234 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 299 bp overlap