chr6:43,285,054–43,285,508

chr6 : 43,285,054 – 43,285,508

454 bp 68 TFs 17 linked genes

This 454 bp open chromatin element is linked to 17 target genes and is bound by 68 transcription factors.

Linked Genes

17 genes

Gene	Expression	Dist. to TSS	Distance	Link type
CRIP3		23.5 kb	Distal	Multiome
DNPH1		55.9 kb	Distal	Multiome
ZNF318		84.3 kb	Distal	Multiome
SRF		114.1 kb	Distal	Multiome
ABCC10		142.2 kb	Distal	Multiome
TJAP1		192.2 kb	Distal	Multiome
PTK7		209.0 kb	Distal	Multiome
KLC4		225.7 kb	Distal	Multiome
MRPL2		225.9 kb	Distal	Multiome
CUL7		231.4 kb	Distal	Multiome
YIPF3		231.6 kb	Distal	Multiome
POLR1C		231.8 kb	Distal	Multiome
RRP36		263.7 kb	Distal	Multiome
MEA1		271.1 kb	Distal	Multiome
KLHDC3		271.1 kb	Distal	Multiome
XPO5		290.6 kb	Distal	Multiome
POLH		290.8 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

68 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 454 bp overlap

BCL11A 1 dataset

ChIP MDA-MB-157 ERP003925.BCL11A.MDA-MB-157 123 bp overlap

BCOR 3 datasets

ChIP WA01 GSE104690.BCOR.WA01 453 bp overlap

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 454 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 454 bp overlap

BRD4 7 datasets

ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 247 bp overlap

ChIP HAP1 GSE108387.BRD4.HAP1 358 bp overlap

ChIP MCF-10A ERP003925.BRD4.MCF-10A 454 bp overlap

ChIP T-47D ERP003925.BRD4.T-47D 454 bp overlap

ChIP hESC GSE33281.BRD4.hESC 53 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 315 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 454 bp overlap

ChIP ME-1 GSE46044.CBFB.ME-1 285 bp overlap

ChIP HCT-116 GSE72622.CDK9.HCT-116 258 bp overlap

ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 300 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 161 bp overlap

CTCF 2 datasets

ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 145 bp overlap

ChIP erythroid GSE67783.CTCF.erythroid 96 bp overlap

CTCFL 2 datasets

ChIP K-562 GSE70764.CTCFL.K-562 262 bp overlap

ChIP delta-47 GSE70764.CTCFL.delta-47 164 bp overlap

ChIP NTERA2 GSE58641.DDX5.NTERA2 454 bp overlap

DEAF1 1 dataset

ChIP keratinocyte GSE129965.DEAF1.keratinocyte 203 bp overlap

ELF1 2 datasets

ChIP ME-1 GSE46044.ELF1.ME-1 232 bp overlap

ChIP ME-1 GSE46044.ELF1.ME-1 64 bp overlap

EP300 1 dataset

ChIP osteoblast ENCSR000AUD.EP300.osteoblast 454 bp overlap

ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 454 bp overlap

ChIP K-562 GSE23730.ERG.K-562 188 bp overlap

ChIP K-562_DOX GSE23730.ERG.K-562_DOX 141 bp overlap

ChIP K-562_DOX GSE23730.ERG.K-562_DOX 95 bp overlap

ChIP ME-1 GSE46044.ERG.ME-1 200 bp overlap

ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 300 bp overlap

ETS1 3 datasets

ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 184 bp overlap

ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 184 bp overlap

ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 184 bp overlap

EZH2 19 datasets

ChIP A-673 ENCSR179SAO.EZH2.A-673 301 bp overlap

ChIP GM23338 ENCSR045YHA.EZH2.GM23338 307 bp overlap

ChIP H1 ENCFF232NZA 454 bp overlap

ChIP H1 ENCFF232NZA 124 bp overlap

ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 278 bp overlap

ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 259 bp overlap

ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 253 bp overlap

ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 358 bp overlap

ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 391 bp overlap

ChIP WA01 ENCSR000ASY.EZH2.WA01 454 bp overlap

ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 454 bp overlap

ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 408 bp overlap

ChIP hESC GSE113817.EZH2.hESC 372 bp overlap

ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 258 bp overlap

ChIP keratinocyte ENCFF070STK 454 bp overlap

ChIP keratinocyte ENCFF070STK 174 bp overlap

ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 237 bp overlap

ChIP myotube ENCSR000ASZ.EZH2.myotube 454 bp overlap

ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 238 bp overlap

EZH2_phosphoT487 1 dataset

ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 271 bp overlap

GABPA 2 datasets

ChIP H1 ENCFF739QFD 244 bp overlap

ChIP WA01 ENCSR000BIW.GABPA.WA01 247 bp overlap

GATA6 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 263 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 283 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 427 bp overlap

HDAC2 1 dataset

ChIP VCaP_ETOH GSE28950.HDAC2.VCaP_ETOH 227 bp overlap

HDAC6 3 datasets

ChIP GM12878 ENCFF918SGD 168 bp overlap

ChIP GM12878 ENCFF918SGD 251 bp overlap

ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 454 bp overlap

HEXIM1 1 dataset

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 454 bp overlap

JARID2 1 dataset

ChIP AMIPS6 GSE48516.JARID2.AMIPS6 454 bp overlap

KDM4A 2 datasets

ChIP H1 ENCFF078LED 454 bp overlap

ChIP WA01 ENCSR000AVC.KDM4A.WA01 428 bp overlap

KMT2A 1 dataset

ChIP RS4-11_DMSO-D3-180402 GSE127507.KMT2A.RS4-11_DMSO-D3-180402 295 bp overlap

ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 225 bp overlap

ChIP H1 ENCFF914VQY 341 bp overlap

ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 229 bp overlap

MYOCD 1 dataset

ChIP A-549 GSE128921.MYOCD.A-549 58 bp overlap

MYOD1 1 dataset

ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 186 bp overlap

NCAPH2 1 dataset

ChIP HEK293 GSE97540.NCAPH2.HEK293 356 bp overlap

NELFE 1 dataset

ChIP K-562_HS GSE112379.NELFE.K-562_HS 225 bp overlap

NR2F2 2 datasets

ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 454 bp overlap

ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 454 bp overlap

NUTM1 1 dataset

ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 454 bp overlap

PCBP1 2 datasets

ChIP K-562 GSE120104.PCBP1.K-562 314 bp overlap

ChIP K-562 ENCSR052PTN.PCBP1.K-562 293 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 454 bp overlap

ChIP WA01 ENCSR000ATK.PHF8.WA01 62 bp overlap

PLAG1 1 dataset

ChIP K-562 GSE111469.PLAG1.K-562 310 bp overlap

POU5F1 4 datasets

ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 90 bp overlap

ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 137 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 406 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 343 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 454 bp overlap

RNF2 2 datasets

ChIP WA01 ENCSR784VUY.RNF2.WA01 286 bp overlap

ChIP WA09 GSE105028.RNF2.WA09 419 bp overlap

RORC 2 datasets

ChIP HCC70 GSE126380.RORC.HCC70 454 bp overlap

ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 454 bp overlap

RUNX1 2 datasets

ChIP Jurkat GSE85524.RUNX1.Jurkat 454 bp overlap

ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 208 bp overlap

ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 224 bp overlap

ChIP WA01 GSE104690.RYBP.WA01 454 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 220 bp overlap

SIRT6 1 dataset

ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 397 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 161 bp overlap

SMARCC1 1 dataset

ChIP hiPSC GSE124903.SMARCC1.hiPSC 203 bp overlap

SREBP2 2 datasets

ChIP HCC70 GSE126380.SREBP2.HCC70 454 bp overlap

ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 454 bp overlap

STAT3 1 dataset

ChIP WA01 ERP004237.STAT3.WA01 303 bp overlap

SUZ12 5 datasets

ChIP H1 ENCFF881NFR 153 bp overlap

ChIP H1 ENCFF881NFR 59 bp overlap

ChIP K-562 ENCSR000AUC.SUZ12.K-562 235 bp overlap

ChIP hiPSC GSE124903.SUZ12.hiPSC 368 bp overlap

ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 449 bp overlap

ChIP ME-1 GSE46044.TAL1.ME-1 241 bp overlap

TFAP2C 2 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 384 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 320 bp overlap

TFIIIC 1 dataset

ChIP HEK293 GSE119418.TFIIIC.HEK293 426 bp overlap

ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 127 bp overlap

TRIM25 1 dataset

ChIP BT-549 GSE79588.TRIM25.BT-549 454 bp overlap

TRIM28 1 dataset

ChIP HCT-116 GSE72622.TRIM28.HCT-116 243 bp overlap

ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 454 bp overlap

ChIP Huh-7 GSE97411.YY1.Huh-7 454 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 180 bp overlap

ChIP PrEC GSE102616.ZFX.PrEC 376 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 317 bp overlap

ZNF468 1 dataset

ChIP HEK293T GSE78099.ZNF468.HEK293T 282 bp overlap

ZNF90 1 dataset

ChIP HEK293T GSE78099.ZNF90.HEK293T 143 bp overlap