chr5 : 168,165,290 – 168,166,256

966 bp 81 TFs 0 linked genes

This 966 bp open chromatin element has no linked target genes and is bound by 81 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

81 transcription factors

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 427 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 318 bp overlap

BCOR 2 datasets

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 195 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 333 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BRD4 4 datasets

ChIP Jurkat GSE83777.BRD4.Jurkat 282 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 574 bp overlap

ChIP hESC GSE33281.BRD4.hESC 61 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 679 bp overlap

CDK9 2 datasets

ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 194 bp overlap

ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 180 bp overlap

CDX2 1 dataset

ChIP LS180_125 GSE31939.CDX2.LS180_125 125 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 173 bp overlap

EGR1 1 dataset

ChIP WA01 ENCSR000BJA.EGR1.WA01 158 bp overlap

ELF3 1 dataset

ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 343 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 158 bp overlap

ESR1 1 dataset

ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 819 bp overlap

ETS1 1 dataset

ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 193 bp overlap

ETV6 1 dataset

ChIP WTC11 ENCFF812SCD 369 bp overlap

EZH2 3 datasets

ChIP PC-9 ENCSR793USK.EZH2.PC-9 66 bp overlap

ChIP PC-9 ENCSR793USK.EZH2.PC-9 269 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 195 bp overlap

EZH2_phosphoT487 1 dataset

ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 96 bp overlap

FOXA1 1 dataset

ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 159 bp overlap

FOXK1 1 dataset

ChIP WTC11 ENCFF875IGU 320 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 195 bp overlap

GATA3 1 dataset

ChIP Jurkat GSE76181.GATA3.Jurkat 336 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 548 bp overlap

HDAC2 2 datasets

ChIP WA01 ENCSR000AVB.HDAC2.WA01 148 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 142 bp overlap

HOXB13 2 datasets

ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 106 bp overlap

ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 183 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 289 bp overlap

JUN 1 dataset

ChIP HUES-8 GSE109524.JUN.HUES-8 273 bp overlap

KDM5B 1 dataset

ChIP HCC2157 GSE46055.KDM5B.HCC2157 156 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 86 bp overlap

LHX2 1 dataset

ChIP retina_pigment GSE60024.LHX2.retina_pigment 220 bp overlap

LMO1 1 dataset

ChIP Jurkat GSE94391.LMO1.Jurkat 296 bp overlap

MAFB 2 datasets

ChIP islet ERP004003.MAFB.islet 207 bp overlap

ChIP islet ERP004003.MAFB.islet 267 bp overlap

MAX 2 datasets

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 200 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 161 bp overlap

MED1 2 datasets

ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 281 bp overlap

ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 231 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MYB 2 datasets

ChIP Jurkat GSE59657.MYB.Jurkat 247 bp overlap

ChIP MOLT-3 GSE59657.MYB.MOLT-3 141 bp overlap

MYC 1 dataset

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 180 bp overlap

Msgn1 1 dataset

Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap

NANOG 6 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 755 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 213 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 203 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 264 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 193 bp overlap

ChIP hESC GSE18292.NANOG.hESC 103 bp overlap

NEUROG2 1 dataset

Motif DE_12h DE_12h-NEUROG2_MA0669.1 10 bp overlap

NHLH1 1 dataset

Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap

NKX2-1 1 dataset

ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 226 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 280 bp overlap

NOTCH1 1 dataset

ChIP HPBALL GSE39263.NOTCH1.HPBALL 195 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

OSR2 1 dataset

ChIP HEK293 GSE76494.OSR2.HEK293 124 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PCGF1 2 datasets

ChIP WA01 GSE104690.PCGF1.WA01 171 bp overlap

ChIP WA01 GSE104690.PCGF1.WA01 203 bp overlap

PDX1 1 dataset

ChIP islet ERP001456.PDX1.islet 167 bp overlap

POLR2A 1 dataset

ChIP thyroid gland ENCFF979LRR 299 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 200 bp overlap

POU4F2 1 dataset

Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap

POU5F1 6 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 329 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 273 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 519 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 133 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 437 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 204 bp overlap

RAD21 1 dataset

ChIP GP5D GSE51234.RAD21.GP5D 265 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 242 bp overlap

RBPJ 2 datasets

ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 139 bp overlap

ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 218 bp overlap

REST 1 dataset

ChIP WA01 ENCSR000BHM.REST.WA01 130 bp overlap

RUNX1 6 datasets

ChIP 697 GSE138031.RUNX1.697 158 bp overlap

ChIP AML_Blast GSE60130.RUNX1.AML_Blast 237 bp overlap

ChIP CD34 GSE64862.RUNX1.CD34 237 bp overlap

ChIP Jurkat GSE76181.RUNX1.Jurkat 230 bp overlap

ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 325 bp overlap

ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 241 bp overlap

SIN3A 2 datasets

ChIP WA01 ENCSR000BIS.SIN3A.WA01 147 bp overlap

ChIP WA01 ENCSR000EBO.SIN3A.WA01 126 bp overlap

SMAD2 1 dataset

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 316 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 275 bp overlap

SMARCA2 2 datasets

ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 290 bp overlap

ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 136 bp overlap

SMARCA4 3 datasets

ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 132 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 446 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 267 bp overlap

SMARCC1 1 dataset

ChIP hiPSC GSE124903.SMARCC1.hiPSC 171 bp overlap

SOX2 6 datasets

ChIP HNSC GSE69479.SOX2.HNSC 122 bp overlap

ChIP KYSE-70 GSE46837.SOX2.KYSE-70 315 bp overlap

ChIP RENVM GSE49404.SOX2.RENVM 212 bp overlap

ChIP RENVM GSE49404.SOX2.RENVM 226 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 239 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 290 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 201 bp overlap

STAT3 2 datasets

ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 198 bp overlap

ChIP Th1_IL-6_Mut3 GSE130810.STAT3.Th1_IL-6_Mut3 158 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 199 bp overlap

TAL1 1 dataset

ChIP MOLT-3 GSE59657.TAL1.MOLT-3 162 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 181 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 296 bp overlap

TEAD1 2 datasets

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

ChIP WTC11 ENCFF502QUV 319 bp overlap

TEAD3 1 dataset

Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap

TEAD4 3 datasets

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

ChIP ESC S26-ESC-d0-TEAD4-exp1 333 bp overlap

ChIP H1 ENCFF778PAX 106 bp overlap

TP53 2 datasets

ChIP H9 GSE39912.TP53.H9 222 bp overlap

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 231 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

VDR 2 datasets

ChIP kidney-cortex GSE129585.VDR.kidney-cortex 180 bp overlap

ChIP kidney-cortex GSE129585.VDR.kidney-cortex 452 bp overlap

YY1 2 datasets

ChIP H1 ENCFF524BTL 301 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 241 bp overlap

ZNF398 1 dataset

ChIP H9 GSE133630.ZNF398.H9 332 bp overlap

ZNF418 1 dataset

Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 226 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 243 bp overlap

ZNF93 1 dataset

Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap

ZSCAN5C 2 datasets

ChIP HEK293 ENCFF343DTU 290 bp overlap

ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 247 bp overlap