chr5 : 148,393,194 148,393,645
451 bp 100 TFs 2 linked genes
This 451 bp open chromatin element is linked to FBXO38 and FBXO38-DT and is bound by 100 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
FBXO38 9.2 kb Proximal Proximity
FBXO38-DT 9.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:148,388,194 – 148,398,645
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 365 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 210 bp overlap
ARID1B 1 dataset
ChIP Hep-G2 GSE69566.ARID1B.Hep-G2 232 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 267 bp overlap
ASCL1 1 dataset
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
BRD4 2 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 253 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 345 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 184 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 115 bp overlap
CTCF 2 datasets
ChIP AG04450 ENCFF116DJL 297 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 174 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 61 bp overlap
ELF1 1 dataset
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 168 bp overlap
ESR1 1 dataset
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 122 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 78 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOSL2 2 datasets
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 131 bp overlap
ChIP HepG2 ENCFF548CXY 258 bp overlap
FOXA1 47 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 211 bp overlap
ChIP 22Rv1 GSE85558.FOXA1.22Rv1 200 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 451 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 111 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 211 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 71 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 178 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 122 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 162 bp overlap
ChIP 22Rv1_ab GSE129951.FOXA1.22Rv1_ab 260 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 143 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 159 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 223 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 126 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 218 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 180 bp overlap
ChIP HepG2 ENCFF207NVJ 76 bp overlap
ChIP HepG2 ENCFF740VZW 65 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 242 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 106 bp overlap
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 179 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 117 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 61 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 167 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 108 bp overlap
ChIP LNCaP_FA GSE114737.FOXA1.LNCaP_FA 112 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 156 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 111 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 95 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 100 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 173 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 156 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 389 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 305 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 71 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 126 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 209 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 149 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 210 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 106 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 74 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 75 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 215 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 133 bp overlap
ChIP liver ERP002306.FOXA1.liver 149 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 334 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 60 bp overlap
FOXA2 24 datasets
ChIP BJ1-hTERT GSE90454.FOXA2.BJ1-hTERT 165 bp overlap
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 97 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 137 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 178 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 206 bp overlap
ChIP BJ1-hTERT_MimosinePlus GSE90454.FOXA2.BJ1-hTERT_MimosinePlus 168 bp overlap
ChIP BJ1-hTERT_MimosineRelease GSE90454.FOXA2.BJ1-hTERT_MimosineRelease 111 bp overlap
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 194 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 221 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 160 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 240 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 128 bp overlap
ChIP DE DE-FOXA2-1 397 bp overlap
ChIP DE DE-FOXA2-2 392 bp overlap
ChIP HepG2 ENCFF533COJ 136 bp overlap
ChIP HepG2 ENCFF570ABM 191 bp overlap
ChIP HepG2 ENCFF894AYY 245 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 129 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 193 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 184 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 143 bp overlap
ChIP colorectal-cancer_type-C GSE106921.FOXA2.colorectal-cancer_type-C 135 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 124 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 436 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 197 bp overlap
FOXK1 2 datasets
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 135 bp overlap
ChIP HepG2 ENCFF635XWY 224 bp overlap
FOXP1 2 datasets
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 181 bp overlap
ChIP HepG2 ENCFF823ERM 95 bp overlap
FOXP4 2 datasets
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 152 bp overlap
ChIP HepG2 ENCFF462ULY 253 bp overlap
GATA2 2 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 100 bp overlap
ChIP HepG2 ENCFF905PYM 188 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 213 bp overlap
ChIP DE DE-GATA4-1 328 bp overlap
ChIP DE DE-GATA4-2 280 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 272 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 160 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 256 bp overlap
ChIP DE DE-GATA6-2 349 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 191 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 222 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 194 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 167 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 236 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 244 bp overlap
HOXA9 1 dataset
ChIP HEK293-FT GSE62586.HOXA9.HEK293-FT 148 bp overlap
HOXB13 1 dataset
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 199 bp overlap
HOXB8 2 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 242 bp overlap
ChIP PANC-1 GSE119930.HOXB8.PANC-1 244 bp overlap
IKZF1 1 dataset
Motif ES_0h ES_0h-IKZF1_MA1508.2 8 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 288 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 238 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 205 bp overlap
Ikzf3 1 dataset
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 256 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 261 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 374 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 348 bp overlap
JUND 4 datasets
ChIP H1 ENCFF010YXS 283 bp overlap
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 127 bp overlap
ChIP HepG2 ENCFF172HFZ 174 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 213 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 83 bp overlap
LIN54 1 dataset
ChIP HepG2 ENCFF662XDE 451 bp overlap
MAX 1 dataset
ChIP NCI-H128 GSE41105.MAX.NCI-H128 141 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 243 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 120 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 304 bp overlap
ChIP LNCaP_pNanog8_Dox GSE74799.NANOG.LNCaP_pNanog8_Dox 156 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 147 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 451 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 271 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 132 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 218 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 133 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 287 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 183 bp overlap
PDX1 3 datasets
ChIP hESC GSE58685.PDX1.hESC 152 bp overlap
ChIP islet ERP001456.PDX1.islet 165 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 258 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 288 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 143 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 98 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 101 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 309 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 232 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 256 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF939HTZ 451 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 167 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 198 bp overlap
RUNX3 1 dataset
Motif ES_0h ES_0h-RUNX3_MA0684.3 8 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 360 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 176 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 261 bp overlap
SMARCA4 4 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 209 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 154 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 213 bp overlap
SMARCB1 3 datasets
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 369 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 163 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 188 bp overlap
SOX13 3 datasets
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 147 bp overlap
ChIP HepG2 ENCFF062VSQ 173 bp overlap
ChIP HepG2 ENCFF231PAK 232 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 376 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 234 bp overlap
SOX2 2 datasets
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 274 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 246 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 170 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 316 bp overlap
ChIP HepG2 ENCFF767OCK 359 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 196 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 178 bp overlap
TCF4 1 dataset
Motif ES_0h ES_0h-TCF4_MA0830.3 8 bp overlap
TCF7 1 dataset
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 129 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 231 bp overlap
TOP2A 1 dataset
ChIP KG-1_etoposide GSE114048.TOP2A.KG-1_etoposide 119 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 142 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 171 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 132 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 353 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 168 bp overlap
ZNF12 2 datasets
ChIP Hep-G2 ENCSR711KBM.ZNF12.Hep-G2 132 bp overlap
ChIP HepG2 ENCFF347LSW 252 bp overlap
ZNF189 1 dataset
Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 415 bp overlap
ZNF274 1 dataset
Motif ES_0h ES_0h-ZNF274_MA1592.2 12 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 151 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 134 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 77 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 219 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 167 bp overlap
ZSCAN4 3 datasets
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap
ChIP HEK293 ENCFF381BKT 108 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 170 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 192 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 295 bp overlap