chr5 : 135,821,292 – 135,821,861
569 bp 78 TFs 1 linked gene
This 569 bp open chromatin element is linked to ENSG00000250378 and is bound by 78 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000250378 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:135,816,292 – 135,826,861
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 163 bp overlap
ASCL1 5 datasets
ChIP NCI-H128 GSE69394.ASCL1.NCI-H128 259 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 243 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 211 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 311 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 112 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 252 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 154 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 195 bp overlap
ATF2 3 datasets
ChIP H1 ENCFF295GZO 486 bp overlap
ChIP H1 ENCFF295GZO 260 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 284 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 321 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 295 bp overlap
BCL11A 1 dataset
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 186 bp overlap
BMI1 1 dataset
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 259 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 85 bp overlap
BRD4 8 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 201 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 208 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 510 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 68 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 402 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 297 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 114 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 113 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 199 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 204 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 251 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 233 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 350 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 118 bp overlap
ESR1 4 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 222 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 162 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 284 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 294 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 444 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 220 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 525 bp overlap
ChIP DE DE-FOXA2-2 509 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 127 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 268 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 463 bp overlap
ChIP DE DE-GATA4-2 476 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-2 474 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 399 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 400 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 271 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 466 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 412 bp overlap
JUN 11 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 550 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 269 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 569 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 440 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 569 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 569 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 569 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 569 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 310 bp overlap
ChIP MCF-7_E2 GSE102410.JUN.MCF-7_E2 197 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 384 bp overlap
JUND 4 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP H1 ENCFF468JZD 202 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 168 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 124 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 110 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 270 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 179 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 318 bp overlap
MAFK 2 datasets
ChIP H1 ENCFF854XWE 285 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 353 bp overlap
MAX 4 datasets
ChIP NCI-H128 GSE41105.MAX.NCI-H128 359 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 446 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 397 bp overlap
ChIP WTC11 ENCFF223QFY 285 bp overlap
MED1 3 datasets
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 159 bp overlap
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 230 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 479 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 207 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 314 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 310 bp overlap
MYOD1 6 datasets
ChIP RD GSE137168.MYOD1.RD 226 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 363 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 569 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 298 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 112 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 138 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 248 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 387 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 317 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 182 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 207 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 463 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 173 bp overlap
NFE2 3 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 283 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 175 bp overlap
ChIP K562 ENCFF047YKA 405 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 377 bp overlap
NFE2L2 1 dataset
ChIP A-549 GSE113497.NFE2L2.A-549 423 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 500 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 569 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 488 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 459 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 357 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 569 bp overlap
RAD21 2 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 219 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 244 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 326 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 111 bp overlap
RFX1 6 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 354 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 236 bp overlap
ChIP MCF-7 ENCFF782EZS 142 bp overlap
ChIP MCF-7 ENCFF973QAD 199 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 397 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 328 bp overlap
RFX5 1 dataset
ChIP MCF-7 ENCSR924TVL.RFX5.MCF-7 304 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 278 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF042ZSL 438 bp overlap
SMAD2 3 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 204 bp overlap
ChIP hESC GSE29422.SMAD2.hESC 184 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 256 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 479 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 569 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 445 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 569 bp overlap
SMAD2_3 7 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 385 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 425 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 569 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 366 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 254 bp overlap
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 349 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 469 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 378 bp overlap
SMAD4 1 dataset
ChIP hESC GSE29422.SMAD4.hESC 170 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 204 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 197 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 210 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 237 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 243 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 451 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 325 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 217 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 303 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 297 bp overlap
STAT3 1 dataset
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 237 bp overlap
TCF12 3 datasets
ChIP H1 ENCFF203EBH 70 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 288 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 404 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 552 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 365 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 306 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 397 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 126 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 180 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 122 bp overlap
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