chr5 : 103,894,907 103,895,154
247 bp 93 TFs 0 linked genes
This 247 bp open chromatin element has no linked target genes and is bound by 93 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:103,889,907 – 103,900,154
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 247 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 164 bp overlap
BRD9 1 dataset
ChIP G-401 GSE120234.BRD9.G-401 241 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 246 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 182 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 247 bp overlap
DPF2 1 dataset
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 247 bp overlap
EP300 3 datasets
ChIP SK-N-SH ENCFF451CNG 221 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 226 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 130 bp overlap
ESR1 13 datasets
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 53 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 231 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 247 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 230 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 247 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 237 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 243 bp overlap
ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 247 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 247 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 247 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 88 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 108 bp overlap
ChIP primary-endometrium-cancer_E2_DSG GSE114737.ESR1.primary-endometrium-cancer_E2_DSG 148 bp overlap
ESRRA 4 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 151 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 98 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 233 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 148 bp overlap
FOSL2 2 datasets
ChIP SK-N-SH ENCFF127ZDW 181 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 159 bp overlap
FOXA1 3 datasets
ChIP LS180 GSE140533.FOXA1.LS180 83 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 56 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 144 bp overlap
FOXA2 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 129 bp overlap
GATA2 2 datasets
ChIP ESF GSE108408.GATA2.ESF 109 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 162 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 184 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 247 bp overlap
GATA6 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 144 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 243 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 247 bp overlap
JUND 3 datasets
ChIP SK-N-SH ENCFF551NEQ 212 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 194 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 127 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 160 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MAFA 1 dataset
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
MAX 2 datasets
ChIP SK-N-SH ENCFF285LXR 247 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 159 bp overlap
MEF2A 1 dataset
ChIP SK-N-SH ENCFF053MLP 200 bp overlap
MYF5 1 dataset
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
MYOD1 2 datasets
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 149 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 189 bp overlap
NANOG 4 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 166 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 161 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 166 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 115 bp overlap
NFIC 2 datasets
ChIP SK-N-SH ENCFF965AKM 247 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 216 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 204 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 168 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 127 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 247 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 242 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 57 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 206 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 247 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 174 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 247 bp overlap
PKNOX2 1 dataset
Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 207 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 99 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 163 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 143 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 222 bp overlap
RXRA 1 dataset
ChIP SK-N-SH ENCFF893DLM 179 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 131 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 173 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 247 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 247 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 149 bp overlap
SMARCC1 3 datasets
ChIP BIN-67_ctrl GSE117734.SMARCC1.BIN-67_ctrl 182 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 170 bp overlap
ChIP G-401_NoDox GSE71504.SMARCC1.G-401_NoDox 154 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 224 bp overlap
ChIP LK2 GSE137459.SOX2.LK2 109 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 247 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 247 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 237 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 201 bp overlap
TCF12 2 datasets
ChIP SK-N-SH ENCFF147AHB 237 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 160 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 155 bp overlap
TCF7L2 2 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 129 bp overlap
ChIP MCF-7 ENCFF219LIX 52 bp overlap
TEAD1 2 datasets
ChIP CCLP1 GSE62272.TEAD1.CCLP1 143 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 192 bp overlap
TEAD4 3 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 172 bp overlap
ChIP SK-N-SH ENCFF754TJT 234 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 165 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TGIF1 1 dataset
Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap
TWIST1 6 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 181 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 247 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 214 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 216 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 247 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 185 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Tcf21 1 dataset
Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 123 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZEB1 1 dataset
ChIP MIA-PaCa-2 GSE88734.ZEB1.MIA-PaCa-2 247 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
ZSCAN31 1 dataset
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap