chr5 : 93,422,676 – 93,423,500
824 bp 104 TFs 1 linked gene
This 824 bp open chromatin element is linked to NR2F1-AS1 and is bound by 104 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NR2F1-AS1 253 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:93,417,676 – 93,428,500
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
ARNT::HIF1A 1 dataset
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 318 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 293 bp overlap
CASZ1 2 datasets
ChIP rhabdomyosarcoma_Ctrl GSE126142.CASZ1.rhabdomyosarcoma_Ctrl 267 bp overlap
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 203 bp overlap
CDX2 1 dataset
ChIP LS180_125 GSE31939.CDX2.LS180_125 53 bp overlap
CEBPB 1 dataset
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 127 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 356 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 692 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 254 bp overlap
CTCF 1 dataset
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 74 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 208 bp overlap
ELF3 3 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ChIP PDAC GSE64557.ELF3.PDAC 145 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 72 bp overlap
ELK1::HOXA1 1 dataset
Motif DE_12h DE_12h-ELK1HOXA1_MA1931.1 14 bp overlap
ELK1::HOXB13 1 dataset
Motif DE_12h DE_12h-ELK1HOXB13_MA1932.2 15 bp overlap
EP300 3 datasets
ChIP Ishikawa ENCFF364ZWT 417 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 298 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 267 bp overlap
ERF::FIGLA 1 dataset
Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap
ERF::HOXB13 1 dataset
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
ERF::NHLH1 1 dataset
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
ERG 8 datasets
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 251 bp overlap
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 194 bp overlap
ChIP aortic-endothelial-cell_D13 GSE139377.ERG.aortic-endothelial-cell_D13 172 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 144 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 174 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 211 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 167 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 166 bp overlap
ESR1 14 datasets
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 183 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 244 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 127 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 221 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 596 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 273 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 355 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 240 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 428 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 250 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 227 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 408 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 317 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 188 bp overlap
ETS1 2 datasets
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 220 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 192 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV2::DRGX 1 dataset
Motif DE_12h DE_12h-ETV2DRGX_MA1940.2 12 bp overlap
ETV2::FIGLA 1 dataset
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV5::DRGX 1 dataset
Motif DE_12h DE_12h-ETV5DRGX_MA1944.2 12 bp overlap
ETV5::FIGLA 1 dataset
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 293 bp overlap
FLI1::DRGX 1 dataset
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
FOS 1 dataset
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 261 bp overlap
FOXA1 1 dataset
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 316 bp overlap
FOXA2 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 386 bp overlap
FOXM1 1 dataset
ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 198 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 212 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 224 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 200 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 401 bp overlap
HNF1A 2 datasets
ChIP HEE_1 GSE76376.HNF1A.HEE_1 303 bp overlap
ChIP HEE_5 GSE76376.HNF1A.HEE_5 130 bp overlap
HNF1B 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 387 bp overlap
HOXB2::ELK1 1 dataset
Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
JUN 3 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 281 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 554 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 572 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MAX 3 datasets
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 134 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 514 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 291 bp overlap
MYCN 2 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 472 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 227 bp overlap
MYF6 1 dataset
Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap
NANOG 4 datasets
ChIP GM23338 ENCFF065NZG 266 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 695 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 346 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 272 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 223 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 462 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 367 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 381 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 286 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 188 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 50 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 287 bp overlap
PKNOX1 1 dataset
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 62 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 509 bp overlap
Prdm15 2 datasets
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
RAD21 2 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 293 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 167 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 173 bp overlap
RELA 9 datasets
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 183 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 322 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 168 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 193 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 265 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 197 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 178 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 235 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 165 bp overlap
REST 7 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 139 bp overlap
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
ChIP HEK293 ENCFF073DOT 128 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 97 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 64 bp overlap
ChIP Ishikawa ENCFF456OHV 126 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 181 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 473 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 284 bp overlap
SMARCA2 1 dataset
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 228 bp overlap
SMARCA4 6 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 190 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 202 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 468 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 424 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 417 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 824 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 220 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 430 bp overlap
SMARCC1 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 176 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 188 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 163 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 716 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 772 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
STAT3 1 dataset
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
TCF12 4 datasets
ChIP Ishikawa ENCFF467DDW 468 bp overlap
ChIP Ishikawa ENCFF467DDW 471 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 286 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 176 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 3 datasets
ChIP Ishikawa ENCFF772OTG 301 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 167 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 228 bp overlap
TFAP4::ETV1 1 dataset
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
TFAP4::FLI1 1 dataset
Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 290 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 315 bp overlap
Tcf21 1 dataset
Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap
ZBTB7A 2 datasets
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 125 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 226 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 168 bp overlap
ZKSCAN5 1 dataset
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 106 bp overlap
ZNF157 1 dataset
Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 141 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF341 3 datasets
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ChIP HEK293 ENCFF944VMC 254 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 193 bp overlap
ZNF382 1 dataset
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
ZNF501 1 dataset
ChIP Hep-G2 ENCSR227PHM.ZNF501.Hep-G2 261 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF674 1 dataset
ChIP HEK293T GSE78099.ZNF674.HEK293T 196 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
ZSCAN31 1 dataset
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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