chr5 : 68,249,427 68,250,438
1,011 bp 139 TFs 0 linked genes
This 1.0 kb open chromatin element has no linked target genes and is bound by 139 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:68,244,427 – 68,255,438
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
139 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 256 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BRD4 3 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 216 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 270 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 184 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 167 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 138 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap
CTCF 7 datasets
ChIP DND41 ENCSR000AQU.CTCF.DND41 138 bp overlap
ChIP HEK293 ENCFF821TIC 431 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 241 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 111 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 111 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 402 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 223 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 326 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
DUX4 1 dataset
ChIP HEK293 GSE75791.DUX4.HEK293 204 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
EN2 1 dataset
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 401 bp overlap
ESR1 6 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 276 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 329 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 181 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 382 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 349 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 340 bp overlap
ESR1_pS118 2 datasets
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 98 bp overlap
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 698 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 168 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 348 bp overlap
FOXA1 3 datasets
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 227 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 273 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 261 bp overlap
FOXA2 1 dataset
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXK1 1 dataset
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 428 bp overlap
GBX1 1 dataset
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 482 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 341 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 422 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 68 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 304 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HOXA3 1 dataset
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif DE_12h DE_12h-HOXA4_MA1496.2 7 bp overlap
HOXA5 1 dataset
Motif DE_12h DE_12h-HOXA5_MA0158.2 8 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Hoxa13 1 dataset
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
JUN 5 datasets
ChIP 786-O GSE86092.JUN.786-O 177 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 344 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 279 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 289 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 419 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF13 1 dataset
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KMT2A 3 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 186 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 261 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 293 bp overlap
LBX1 1 dataset
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 191 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 514 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 480 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 279 bp overlap
MZF1 3 datasets
ChIP HEK293 ENCFF683ZWN 421 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 309 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 100 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 446 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 264 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 495 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 521 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 312 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
NR1D1 1 dataset
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 191 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 2 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 248 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 244 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 354 bp overlap
POU5F1B 2 datasets
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 332 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 165 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
PRRX2 1 dataset
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 156 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RFX1 2 datasets
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
RFX2 2 datasets
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
RFX3 1 dataset
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
RFX5 1 dataset
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 427 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 342 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 498 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 317 bp overlap
SMAD3 1 dataset
ChIP SUM159PT GSE130364.SMAD3.SUM159PT 137 bp overlap
SMARCA4 2 datasets
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 451 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 478 bp overlap
SOX13 1 dataset
Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap
SOX2 2 datasets
Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SOX9 1 dataset
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Sox3 1 dataset
Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 199 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 221 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 369 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF143 3 datasets
Motif DE_12h DE_12h-ZNF143_MA0088.2 16 bp overlap
Motif DE_12h DE_12h-ZNF143_MA0088.2 16 bp overlap
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 196 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF382 1 dataset
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap